EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000010778 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 6563 bases
Position: chrKQ557217.1:458397-464959
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000014223	Exo_endo_phos	PF03372.23	8.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000014400	-	1083	-	ENSXCOP00000014223	360 (aa)	-	-
ENSXCOT00000014402	-	894	-	ENSXCOP00000014225	297 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000010778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000010778's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000010778	-	69	50.996	ENSG00000111802	TDP2	81	50.996	Homo_sapiens
ENSXCOG00000010778	-	77	64.769	ENSAPOG00000018379	-	99	64.769	Acanthochromis_polyacanthus
ENSXCOG00000010778	-	69	48.606	ENSAMEG00000010230	TDP2	88	48.606	Ailuropoda_melanoleuca
ENSXCOG00000010778	-	52	61.979	ENSAOCG00000010081	-	84	61.979	Amphiprion_ocellaris
ENSXCOG00000010778	-	70	65.613	ENSAPEG00000004208	-	90	65.613	Amphiprion_percula
ENSXCOG00000010778	-	88	57.101	ENSATEG00000010663	-	97	56.140	Anabas_testudineus
ENSXCOG00000010778	-	72	51.154	ENSACAG00000002332	TDP2	70	51.154	Anolis_carolinensis
ENSXCOG00000010778	-	69	50.598	ENSANAG00000020033	TDP2	68	50.598	Aotus_nancymaae
ENSXCOG00000010778	-	79	54.895	ENSACLG00000016174	tdp2b	95	54.895	Astatotilapia_calliptera
ENSXCOG00000010778	-	79	54.196	ENSACLG00000016132	tdp2b	95	54.196	Astatotilapia_calliptera
ENSXCOG00000010778	-	69	58.400	ENSACLG00000016148	tdp2b	88	58.400	Astatotilapia_calliptera
ENSXCOG00000010778	-	79	50.523	ENSAMXG00000011775	tdp2b	74	50.523	Astyanax_mexicanus
ENSXCOG00000010778	-	68	53.252	ENSAMXG00000036549	tdp2a	79	53.252	Astyanax_mexicanus
ENSXCOG00000010778	-	69	49.004	ENSBTAG00000000365	TDP2	68	49.004	Bos_taurus
ENSXCOG00000010778	-	69	32.677	WBGene00013405	tdpt-1	67	32.677	Caenorhabditis_elegans
ENSXCOG00000010778	-	69	49.801	ENSCJAG00000021963	-	68	49.801	Callithrix_jacchus
ENSXCOG00000010778	-	69	50.598	ENSCJAG00000006074	TDP2	81	50.598	Callithrix_jacchus
ENSXCOG00000010778	-	69	49.801	ENSCAFG00000010428	TDP2	85	49.801	Canis_familiaris
ENSXCOG00000010778	-	69	49.801	ENSCAFG00020009994	TDP2	85	49.801	Canis_lupus_dingo
ENSXCOG00000010778	-	69	48.207	ENSCHIG00000015294	-	83	48.207	Capra_hircus
ENSXCOG00000010778	-	69	48.606	ENSTSYG00000037199	TDP2	80	48.606	Carlito_syrichta
ENSXCOG00000010778	-	69	51.394	ENSCPOG00000006390	TDP2	69	51.394	Cavia_porcellus
ENSXCOG00000010778	-	69	50.996	ENSCCAG00000022734	TDP2	81	50.996	Cebus_capucinus
ENSXCOG00000010778	-	71	49.804	ENSCATG00000022076	TDP2	82	50.000	Cercocebus_atys
ENSXCOG00000010778	-	69	50.598	ENSCLAG00000002072	TDP2	69	50.598	Chinchilla_lanigera
ENSXCOG00000010778	-	69	51.004	ENSCSAG00000007769	TDP2	68	51.004	Chlorocebus_sabaeus
ENSXCOG00000010778	-	74	51.852	ENSCPBG00000006551	TDP2	68	51.852	Chrysemys_picta_bellii
ENSXCOG00000010778	-	71	50.196	ENSCANG00000040122	TDP2	83	50.196	Colobus_angolensis_palliatus
ENSXCOG00000010778	-	72	50.579	ENSCGRG00001000384	Tdp2	69	50.965	Cricetulus_griseus_chok1gshd
ENSXCOG00000010778	-	72	50.965	ENSCGRG00000010250	Tdp2	73	50.965	Cricetulus_griseus_crigri
ENSXCOG00000010778	-	70	62.550	ENSCVAG00000003114	tdp2b	69	62.550	Cyprinodon_variegatus
ENSXCOG00000010778	-	70	55.512	ENSDARG00000035954	tdp2b	65	55.512	Danio_rerio
ENSXCOG00000010778	-	70	50.988	ENSDARG00000069941	tdp2a	55	50.988	Danio_rerio
ENSXCOG00000010778	-	69	50.996	ENSDNOG00000044082	TDP2	67	50.996	Dasypus_novemcinctus
ENSXCOG00000010778	-	69	50.199	ENSETEG00000019096	TDP2	89	50.199	Echinops_telfairi
ENSXCOG00000010778	-	82	41.017	ENSEBUG00000006535	tdp2a	66	41.017	Eptatretus_burgeri
ENSXCOG00000010778	-	69	48.606	ENSEASG00005007656	TDP2	68	48.606	Equus_asinus_asinus
ENSXCOG00000010778	-	69	48.606	ENSECAG00000014264	TDP2	68	48.606	Equus_caballus
ENSXCOG00000010778	-	68	50.204	ENSEEUG00000010776	TDP2	69	49.004	Erinaceus_europaeus
ENSXCOG00000010778	-	79	45.017	ENSELUG00000009321	tdp2a	77	49.004	Esox_lucius
ENSXCOG00000010778	-	70	57.143	ENSELUG00000016449	tdp2b	66	57.143	Esox_lucius
ENSXCOG00000010778	-	69	49.402	ENSFCAG00000025612	TDP2	68	49.402	Felis_catus
ENSXCOG00000010778	-	71	52.549	ENSFALG00000004710	TDP2	70	52.549	Ficedula_albicollis
ENSXCOG00000010778	-	69	50.199	ENSFDAG00000006512	TDP2	85	50.199	Fukomys_damarensis
ENSXCOG00000010778	-	70	74.603	ENSFHEG00000013560	-	86	74.603	Fundulus_heteroclitus
ENSXCOG00000010778	-	70	54.331	ENSGALG00000013637	TDP2	68	54.331	Gallus_gallus
ENSXCOG00000010778	-	72	52.471	ENSGAGG00000002853	TDP2	66	52.471	Gopherus_agassizii
ENSXCOG00000010778	-	69	50.996	ENSGGOG00000014237	TDP2	81	50.996	Gorilla_gorilla
ENSXCOG00000010778	-	69	60.000	ENSHBUG00000002714	tdp2b	69	60.000	Haplochromis_burtoni
ENSXCOG00000010778	-	54	58.031	ENSHBUG00000005421	-	80	58.031	Haplochromis_burtoni
ENSXCOG00000010778	-	72	48.302	ENSHGLG00000008655	TDP2	73	48.302	Heterocephalus_glaber_female
ENSXCOG00000010778	-	72	48.302	ENSHGLG00100019087	TDP2	73	48.302	Heterocephalus_glaber_male
ENSXCOG00000010778	-	69	54.582	ENSIPUG00000013691	tdp2b	66	54.582	Ictalurus_punctatus
ENSXCOG00000010778	-	70	47.826	ENSJJAG00000021685	Tdp2	71	47.826	Jaculus_jaculus
ENSXCOG00000010778	-	70	79.447	ENSKMAG00000015485	-	81	79.447	Kryptolebias_marmoratus
ENSXCOG00000010778	-	79	48.070	ENSLACG00000008852	TDP2	76	48.070	Latimeria_chalumnae
ENSXCOG00000010778	-	70	55.159	ENSLOCG00000005817	tdp2b	89	55.159	Lepisosteus_oculatus
ENSXCOG00000010778	-	69	51.394	ENSLAFG00000002567	TDP2	70	51.394	Loxodonta_africana
ENSXCOG00000010778	-	71	50.196	ENSMFAG00000045296	TDP2	83	50.196	Macaca_fascicularis
ENSXCOG00000010778	-	69	51.406	ENSMMUG00000009803	TDP2	68	51.406	Macaca_mulatta
ENSXCOG00000010778	-	71	50.196	ENSMNEG00000038003	TDP2	83	50.196	Macaca_nemestrina
ENSXCOG00000010778	-	71	49.804	ENSMLEG00000028883	TDP2	83	49.804	Mandrillus_leucophaeus
ENSXCOG00000010778	-	71	58.594	ENSMAMG00000013654	tdp2b	71	58.594	Mastacembelus_armatus
ENSXCOG00000010778	-	68	56.790	ENSMZEG00005004055	tdp2b	80	56.790	Maylandia_zebra
ENSXCOG00000010778	-	79	54.545	ENSMZEG00005004126	tdp2b	95	54.545	Maylandia_zebra
ENSXCOG00000010778	-	69	51.807	ENSMZEG00005003980	-	80	51.807	Maylandia_zebra
ENSXCOG00000010778	-	69	55.200	ENSMZEG00005004103	tdp2b	83	55.200	Maylandia_zebra
ENSXCOG00000010778	-	69	58.000	ENSMZEG00005004153	tdp2b	88	58.000	Maylandia_zebra
ENSXCOG00000010778	-	69	58.800	ENSMZEG00005004077	tdp2b	84	58.800	Maylandia_zebra
ENSXCOG00000010778	-	69	60.000	ENSMZEG00005003950	tdp2b	69	60.000	Maylandia_zebra
ENSXCOG00000010778	-	70	54.724	ENSMGAG00000008014	TDP2	68	54.724	Meleagris_gallopavo
ENSXCOG00000010778	-	72	50.385	ENSMAUG00000014451	Tdp2	69	50.385	Mesocricetus_auratus
ENSXCOG00000010778	-	69	50.996	ENSMICG00000000039	TDP2	84	50.996	Microcebus_murinus
ENSXCOG00000010778	-	72	50.575	ENSMOCG00000002823	Tdp2	69	50.575	Microtus_ochrogaster
ENSXCOG00000010778	-	60	52.778	ENSMODG00000011653	TDP2	65	52.778	Monodelphis_domestica
ENSXCOG00000010778	-	71	66.535	ENSMALG00000005368	-	86	66.535	Monopterus_albus
ENSXCOG00000010778	-	72	50.575	MGP_CAROLIEiJ_G0018354	Tdp2	69	50.958	Mus_caroli
ENSXCOG00000010778	-	72	49.808	ENSMUSG00000035958	Tdp2	69	50.192	Mus_musculus
ENSXCOG00000010778	-	72	48.846	MGP_PahariEiJ_G0019417	Tdp2	69	48.846	Mus_pahari
ENSXCOG00000010778	-	72	49.808	MGP_SPRETEiJ_G0019220	Tdp2	69	49.808	Mus_spretus
ENSXCOG00000010778	-	69	49.402	ENSMPUG00000004516	TDP2	69	49.402	Mustela_putorius_furo
ENSXCOG00000010778	-	69	47.809	ENSMLUG00000013506	TDP2	69	47.809	Myotis_lucifugus
ENSXCOG00000010778	-	70	49.603	ENSNGAG00000001375	Tdp2	67	49.603	Nannospalax_galili
ENSXCOG00000010778	-	69	50.598	ENSNLEG00000002447	TDP2	79	50.598	Nomascus_leucogenys
ENSXCOG00000010778	-	69	50.996	ENSOPRG00000016299	TDP2	71	50.996	Ochotona_princeps
ENSXCOG00000010778	-	69	50.598	ENSODEG00000014018	TDP2	84	50.598	Octodon_degus
ENSXCOG00000010778	-	69	49.004	ENSOCUG00000013773	TDP2	69	49.004	Oryctolagus_cuniculus
ENSXCOG00000010778	-	70	72.222	ENSORLG00000001661	-	92	72.222	Oryzias_latipes
ENSXCOG00000010778	-	70	71.825	ENSORLG00020004634	-	92	71.825	Oryzias_latipes_hni
ENSXCOG00000010778	-	70	62.451	ENSORLG00015008190	-	91	62.451	Oryzias_latipes_hsok
ENSXCOG00000010778	-	74	66.418	ENSOMEG00000015899	-	98	66.418	Oryzias_melastigma
ENSXCOG00000010778	-	69	50.199	ENSOGAG00000025303	TDP2	67	50.199	Otolemur_garnettii
ENSXCOG00000010778	-	69	50.996	ENSPPAG00000029023	TDP2	82	50.996	Pan_paniscus
ENSXCOG00000010778	-	69	48.606	ENSPPRG00000015398	TDP2	68	48.606	Panthera_pardus
ENSXCOG00000010778	-	69	48.606	ENSPTIG00000018574	TDP2	85	48.606	Panthera_tigris_altaica
ENSXCOG00000010778	-	69	50.996	ENSPTRG00000017778	TDP2	81	50.996	Pan_troglodytes
ENSXCOG00000010778	-	71	49.804	ENSPANG00000017590	TDP2	82	50.000	Papio_anubis
ENSXCOG00000010778	-	70	53.968	ENSPKIG00000006483	tdp2b	67	53.968	Paramormyrops_kingsleyae
ENSXCOG00000010778	-	70	53.543	ENSPSIG00000004948	TDP2	87	53.543	Pelodiscus_sinensis
ENSXCOG00000010778	-	72	50.965	ENSPEMG00000001788	Tdp2	68	50.965	Peromyscus_maniculatus_bairdii
ENSXCOG00000010778	-	70	44.403	ENSPMAG00000001570	tdp2b	97	44.776	Petromyzon_marinus
ENSXCOG00000010778	-	70	50.787	ENSPCIG00000007316	TDP2	65	50.787	Phascolarctos_cinereus
ENSXCOG00000010778	-	73	87.121	ENSPFOG00000017990	-	95	87.121	Poecilia_formosa
ENSXCOG00000010778	-	74	86.813	ENSPLAG00000019439	-	86	86.813	Poecilia_latipinna
ENSXCOG00000010778	-	82	79.392	ENSPMEG00000010824	-	97	79.392	Poecilia_mexicana
ENSXCOG00000010778	-	69	50.199	ENSPPYG00000016282	TDP2	63	50.199	Pongo_abelii
ENSXCOG00000010778	-	69	49.801	ENSPCOG00000021415	TDP2	87	49.801	Propithecus_coquereli
ENSXCOG00000010778	-	69	60.000	ENSPNYG00000011532	tdp2b	69	60.000	Pundamilia_nyererei
ENSXCOG00000010778	-	69	56.015	ENSPNYG00000011504	tdp2b	86	56.015	Pundamilia_nyererei
ENSXCOG00000010778	-	70	57.143	ENSPNAG00000022162	tdp2a	63	57.143	Pygocentrus_nattereri
ENSXCOG00000010778	-	72	50.000	ENSRNOG00000018246	Tdp2	69	50.388	Rattus_norvegicus
ENSXCOG00000010778	-	71	50.196	ENSRBIG00000037119	TDP2	83	50.196	Rhinopithecus_bieti
ENSXCOG00000010778	-	71	50.196	ENSRROG00000005025	TDP2	83	50.196	Rhinopithecus_roxellana
ENSXCOG00000010778	-	69	50.199	ENSSBOG00000028734	TDP2	81	50.199	Saimiri_boliviensis_boliviensis
ENSXCOG00000010778	-	70	52.362	ENSSHAG00000002506	TDP2	67	52.362	Sarcophilus_harrisii
ENSXCOG00000010778	-	75	51.181	ENSSFOG00015011322	-	79	49.474	Scleropages_formosus
ENSXCOG00000010778	-	69	48.606	ENSSARG00000013547	TDP2	89	48.606	Sorex_araneus
ENSXCOG00000010778	-	74	48.352	ENSSPUG00000008288	TDP2	72	48.352	Sphenodon_punctatus
ENSXCOG00000010778	-	69	49.402	ENSSSCG00000001092	TDP2	68	49.402	Sus_scrofa
ENSXCOG00000010778	-	70	52.362	ENSTGUG00000009035	TDP2	96	52.362	Taeniopygia_guttata
ENSXCOG00000010778	-	70	65.737	ENSTRUG00000012218	-	87	65.737	Takifugu_rubripes
ENSXCOG00000010778	-	70	59.289	ENSTRUG00000014347	tdp2b	70	59.289	Takifugu_rubripes
ENSXCOG00000010778	-	69	66.135	ENSTNIG00000010260	TDP2	95	66.135	Tetraodon_nigroviridis
ENSXCOG00000010778	-	70	58.893	ENSTNIG00000017792	tdp2b	70	58.893	Tetraodon_nigroviridis
ENSXCOG00000010778	-	69	51.394	ENSTTRG00000016376	TDP2	68	51.394	Tursiops_truncatus
ENSXCOG00000010778	-	69	49.004	ENSUAMG00000025939	TDP2	71	49.004	Ursus_americanus
ENSXCOG00000010778	-	69	49.004	ENSUMAG00000020111	TDP2	82	49.004	Ursus_maritimus
ENSXCOG00000010778	-	70	50.980	ENSXETG00000014826	tdp2	67	50.980	Xenopus_tropicalis
ENSXCOG00000010778	-	76	99.267	ENSXMAG00000022252	-	79	99.267	Xiphophorus_maculatus