EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000010950 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-210j14.3
Alias: -
Full Name: si:dkey-210j14.3
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 892 bases
Position: chrKQ557208.1:15380010-15380901
Accession: ZDB-GENE-131121-88
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000014438	zf-C2H2	PF00096.26	1.6e-22	1	3
ENSXCOP00000014438	zf-C2H2	PF00096.26	1.6e-22	2	3
ENSXCOP00000014438	zf-C2H2	PF00096.26	1.6e-22	3	3
ENSXCOP00000014438	zf-met	PF12874.7	4.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000014623	-	627	-	ENSXCOP00000014438	208 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000010950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000010950's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000010950	si:dkey-210j14.3	93	53.465	ENSXCOG00000007368	-	99	53.465
ENSXCOG00000010950	si:dkey-210j14.3	98	53.731	ENSXCOG00000007981	-	84	52.381
ENSXCOG00000010950	si:dkey-210j14.3	50	60.000	ENSXCOG00000007979	-	60	60.000
ENSXCOG00000010950	si:dkey-210j14.3	59	47.619	ENSXCOG00000013066	-	75	47.619
ENSXCOG00000010950	si:dkey-210j14.3	50	52.381	ENSXCOG00000018615	-	86	52.381
ENSXCOG00000010950	si:dkey-210j14.3	54	47.115	ENSXCOG00000009186	-	89	47.115
ENSXCOG00000010950	si:dkey-210j14.3	58	43.333	ENSXCOG00000009781	-	60	43.333
ENSXCOG00000010950	si:dkey-210j14.3	80	56.452	ENSXCOG00000016567	-	89	50.617
ENSXCOG00000010950	si:dkey-210j14.3	55	44.898	ENSXCOG00000019861	-	53	38.053
ENSXCOG00000010950	si:dkey-210j14.3	84	51.429	ENSXCOG00000019457	-	95	51.429
ENSXCOG00000010950	si:dkey-210j14.3	74	47.619	ENSXCOG00000003468	-	88	47.619
ENSXCOG00000010950	si:dkey-210j14.3	77	49.515	ENSXCOG00000003896	-	60	49.515
ENSXCOG00000010950	si:dkey-210j14.3	57	52.273	ENSXCOG00000003484	-	60	52.273
ENSXCOG00000010950	si:dkey-210j14.3	66	56.364	ENSXCOG00000012924	-	92	49.505
ENSXCOG00000010950	si:dkey-210j14.3	96	53.922	ENSXCOG00000001226	-	86	52.381
ENSXCOG00000010950	si:dkey-210j14.3	83	45.714	ENSXCOG00000009798	-	87	45.714
ENSXCOG00000010950	si:dkey-210j14.3	83	48.454	ENSXCOG00000002857	-	95	48.454
ENSXCOG00000010950	si:dkey-210j14.3	77	51.807	ENSXCOG00000007987	-	76	51.807
ENSXCOG00000010950	si:dkey-210j14.3	61	43.902	ENSXCOG00000009597	ZNF319	80	43.902
ENSXCOG00000010950	si:dkey-210j14.3	86	50.420	ENSXCOG00000001116	-	91	53.125
ENSXCOG00000010950	si:dkey-210j14.3	61	43.590	ENSXCOG00000005697	-	55	43.590
ENSXCOG00000010950	si:dkey-210j14.3	82	52.475	ENSXCOG00000010567	-	86	52.475
ENSXCOG00000010950	si:dkey-210j14.3	79	43.617	ENSXCOG00000012645	-	51	43.617
ENSXCOG00000010950	si:dkey-210j14.3	82	51.648	ENSXCOG00000003451	-	92	46.552
ENSXCOG00000010950	si:dkey-210j14.3	82	42.708	ENSXCOG00000014360	-	69	42.708
ENSXCOG00000010950	si:dkey-210j14.3	80	49.138	ENSXCOG00000007139	-	79	46.154
ENSXCOG00000010950	si:dkey-210j14.3	60	46.835	ENSXCOG00000018315	-	92	46.835
ENSXCOG00000010950	si:dkey-210j14.3	57	50.476	ENSXCOG00000014361	-	58	50.476
ENSXCOG00000010950	si:dkey-210j14.3	69	50.476	ENSXCOG00000001292	-	87	50.476
ENSXCOG00000010950	si:dkey-210j14.3	84	52.222	ENSXCOG00000000528	-	89	52.222
ENSXCOG00000010950	si:dkey-210j14.3	54	48.214	ENSXCOG00000015435	-	81	48.214
ENSXCOG00000010950	si:dkey-210j14.3	85	55.238	ENSXCOG00000007937	-	90	55.238
ENSXCOG00000010950	si:dkey-210j14.3	71	52.427	ENSXCOG00000007957	-	85	52.427
ENSXCOG00000010950	si:dkey-210j14.3	55	47.887	ENSXCOG00000011372	-	66	47.887
ENSXCOG00000010950	si:dkey-210j14.3	67	52.066	ENSXCOG00000007076	-	99	52.066
ENSXCOG00000010950	si:dkey-210j14.3	58	36.585	ENSXCOG00000019675	scrt1b	53	36.585
ENSXCOG00000010950	si:dkey-210j14.3	72	52.632	ENSXCOG00000009003	-	90	53.000
ENSXCOG00000010950	si:dkey-210j14.3	79	48.276	ENSXCOG00000003499	-	53	48.276
ENSXCOG00000010950	si:dkey-210j14.3	87	51.064	ENSXCOG00000013787	-	59	51.064
ENSXCOG00000010950	si:dkey-210j14.3	65	46.154	ENSXCOG00000013870	-	75	47.872
ENSXCOG00000010950	si:dkey-210j14.3	98	50.476	ENSXCOG00000008116	-	94	52.381
ENSXCOG00000010950	si:dkey-210j14.3	50	49.057	ENSXCOG00000016589	-	93	49.057
ENSXCOG00000010950	si:dkey-210j14.3	66	46.154	ENSXCOG00000009992	zbtb47b	69	46.154
ENSXCOG00000010950	si:dkey-210j14.3	93	55.238	ENSXCOG00000015441	-	90	55.238
ENSXCOG00000010950	si:dkey-210j14.3	95	57.282	ENSXCOG00000019443	-	96	57.895
ENSXCOG00000010950	si:dkey-210j14.3	72	52.679	ENSXCOG00000017328	-	79	52.679
ENSXCOG00000010950	si:dkey-210j14.3	91	48.246	ENSXCOG00000003472	-	90	48.246
ENSXCOG00000010950	si:dkey-210j14.3	61	49.383	ENSXCOG00000013306	-	60	49.383
ENSXCOG00000010950	si:dkey-210j14.3	51	44.681	ENSXCOG00000020769	-	93	44.681
ENSXCOG00000010950	si:dkey-210j14.3	71	47.826	ENSXCOG00000010259	-	59	47.826
ENSXCOG00000010950	si:dkey-210j14.3	56	42.308	ENSXCOG00000009668	-	68	42.308
ENSXCOG00000010950	si:dkey-210j14.3	79	45.714	ENSXCOG00000009785	-	76	45.714
ENSXCOG00000010950	si:dkey-210j14.3	87	48.544	ENSXCOG00000012921	-	95	48.544
ENSXCOG00000010950	si:dkey-210j14.3	53	57.895	ENSXCOG00000007420	-	98	57.895
ENSXCOG00000010950	si:dkey-210j14.3	91	50.476	ENSXCOG00000007406	-	98	50.476
ENSXCOG00000010950	si:dkey-210j14.3	79	55.128	ENSXCOG00000010948	-	87	55.128
ENSXCOG00000010950	si:dkey-210j14.3	83	50.000	ENSXCOG00000019482	-	81	50.000
ENSXCOG00000010950	si:dkey-210j14.3	73	40.000	ENSXCOG00000003001	-	82	40.000
ENSXCOG00000010950	si:dkey-210j14.3	76	50.450	ENSXCOG00000007396	-	87	50.450
ENSXCOG00000010950	si:dkey-210j14.3	69	48.913	ENSXCOG00000019492	-	87	49.167
ENSXCOG00000010950	si:dkey-210j14.3	82	47.706	ENSXCOG00000019149	znf526	50	39.623
ENSXCOG00000010950	si:dkey-210j14.3	60	48.571	ENSXCOG00000017871	zgc:113343	63	48.571
ENSXCOG00000010950	si:dkey-210j14.3	65	42.453	ENSXCOG00000000254	-	68	42.453
ENSXCOG00000010950	si:dkey-210j14.3	85	50.495	ENSXCOG00000015947	-	91	50.495
ENSXCOG00000010950	si:dkey-210j14.3	75	57.143	ENSXCOG00000002473	-	89	57.143
ENSXCOG00000010950	si:dkey-210j14.3	76	45.455	ENSXCOG00000009997	-	57	45.455
ENSXCOG00000010950	si:dkey-210j14.3	73	52.427	ENSXCOG00000019382	-	76	52.427
ENSXCOG00000010950	si:dkey-210j14.3	66	40.650	ENSXCOG00000002869	-	61	40.650
ENSXCOG00000010950	si:dkey-210j14.3	96	53.061	ENSXCOG00000002898	-	82	53.061
ENSXCOG00000010950	si:dkey-210j14.3	88	42.963	ENSXCOG00000007413	-	73	42.963
ENSXCOG00000010950	si:dkey-210j14.3	78	53.333	ENSXCOG00000007414	-	93	53.333
ENSXCOG00000010950	si:dkey-210j14.3	71	55.682	ENSXCOG00000000354	-	70	55.682
ENSXCOG00000010950	si:dkey-210j14.3	82	55.238	ENSXCOG00000011725	-	92	55.238
ENSXCOG00000010950	si:dkey-210j14.3	57	51.724	ENSXCOG00000015428	-	64	51.724
ENSXCOG00000010950	si:dkey-210j14.3	57	51.429	ENSXCOG00000007941	-	83	51.429
ENSXCOG00000010950	si:dkey-210j14.3	87	58.095	ENSXCOG00000007945	-	97	58.095
ENSXCOG00000010950	si:dkey-210j14.3	63	43.810	ENSXCOG00000007499	zbtb41	63	43.810
ENSXCOG00000010950	si:dkey-210j14.3	72	49.107	ENSXCOG00000006553	-	86	49.107
ENSXCOG00000010950	si:dkey-210j14.3	85	53.704	ENSXCOG00000007529	-	98	52.778
ENSXCOG00000010950	si:dkey-210j14.3	76	52.381	ENSXCOG00000016860	-	97	52.381
ENSXCOG00000010950	si:dkey-210j14.3	76	45.333	ENSXCOG00000003493	-	80	45.333
ENSXCOG00000010950	si:dkey-210j14.3	87	50.435	ENSXCOG00000006614	-	93	48.760
ENSXCOG00000010950	si:dkey-210j14.3	79	52.427	ENSXCOG00000019484	-	100	47.191
ENSXCOG00000010950	si:dkey-210j14.3	77	39.683	ENSXCOG00000009768	-	78	39.683
ENSXCOG00000010950	si:dkey-210j14.3	84	55.670	ENSXCOG00000007994	-	90	55.670
ENSXCOG00000010950	si:dkey-210j14.3	82	58.209	ENSXCOG00000015312	-	86	58.209
ENSXCOG00000010950	si:dkey-210j14.3	79	49.123	ENSXCOG00000013004	-	81	49.123
ENSXCOG00000010950	si:dkey-210j14.3	75	57.447	ENSXCOG00000018253	-	92	57.447
ENSXCOG00000010950	si:dkey-210j14.3	89	45.545	ENSXCOG00000019377	-	93	45.545
ENSXCOG00000010950	si:dkey-210j14.3	84	52.336	ENSXCOG00000002512	-	87	52.336
ENSXCOG00000010950	si:dkey-210j14.3	56	49.074	ENSXCOG00000020768	-	66	49.074
ENSXCOG00000010950	si:dkey-210j14.3	82	50.476	ENSXCOG00000012458	-	69	50.476
ENSXCOG00000010950	si:dkey-210j14.3	63	47.525	ENSXCOG00000009794	-	75	47.525
ENSXCOG00000010950	si:dkey-210j14.3	88	49.020	ENSXCOG00000008978	-	88	49.020
ENSXCOG00000010950	si:dkey-210j14.3	61	47.059	ENSXCOG00000008567	prdm5	63	47.059
ENSXCOG00000010950	si:dkey-210j14.3	82	46.667	ENSXCOG00000003441	-	59	46.667
ENSXCOG00000010950	si:dkey-210j14.3	74	42.982	ENSXCOG00000013504	znf384l	51	42.982
ENSXCOG00000010950	si:dkey-210j14.3	64	47.500	ENSXCOG00000009674	-	79	47.500
ENSXCOG00000010950	si:dkey-210j14.3	58	39.669	ENSXCOG00000009772	-	80	39.669
ENSXCOG00000010950	si:dkey-210j14.3	87	57.778	ENSXCOG00000001200	-	93	50.495
ENSXCOG00000010950	si:dkey-210j14.3	60	48.571	ENSXCOG00000003093	-	82	48.571
ENSXCOG00000010950	si:dkey-210j14.3	80	52.679	ENSXCOG00000007376	-	92	52.679
ENSXCOG00000010950	si:dkey-210j14.3	68	49.367	ENSXCOG00000010576	-	69	49.367
ENSXCOG00000010950	si:dkey-210j14.3	58	48.315	ENSXCOG00000006951	-	77	48.315
ENSXCOG00000010950	si:dkey-210j14.3	64	52.439	ENSXCOG00000009665	-	83	52.439
ENSXCOG00000010950	si:dkey-210j14.3	82	52.336	ENSXCOG00000008062	-	95	52.336
ENSXCOG00000010950	si:dkey-210j14.3	73	51.961	ENSXCOG00000010507	-	52	51.961
ENSXCOG00000010950	si:dkey-210j14.3	88	51.456	ENSXCOG00000008083	-	94	47.573
ENSXCOG00000010950	si:dkey-210j14.3	90	45.679	ENSXCOG00000019401	-	87	46.154
ENSXCOG00000010950	si:dkey-210j14.3	64	40.566	ENSXCOG00000018117	znf710b	50	40.566
ENSXCOG00000010950	si:dkey-210j14.3	96	48.214	ENSXCOG00000003431	-	79	48.214
ENSXCOG00000010950	si:dkey-210j14.3	83	43.636	ENSXCOG00000003435	-	92	43.636
ENSXCOG00000010950	si:dkey-210j14.3	81	44.086	ENSXCOG00000003438	-	71	44.086
ENSXCOG00000010950	si:dkey-210j14.3	53	40.909	ENSXCOG00000015084	snai2	52	40.909
ENSXCOG00000010950	si:dkey-210j14.3	74	48.571	ENSXCOG00000003532	-	77	48.571
ENSXCOG00000010950	si:dkey-210j14.3	83	50.602	ENSXCOG00000003530	-	82	50.602
ENSXCOG00000010950	si:dkey-210j14.3	61	45.614	ENSXCOG00000003537	-	77	45.614
ENSXCOG00000010950	si:dkey-210j14.3	77	49.123	ENSXCOG00000003538	-	100	50.000
ENSXCOG00000010950	si:dkey-210j14.3	71	52.041	ENSXCOG00000019481	-	90	52.041
ENSXCOG00000010950	si:dkey-210j14.3	84	55.435	ENSXCOG00000016307	-	85	55.435
ENSXCOG00000010950	si:dkey-210j14.3	88	52.500	ENSXCOG00000016117	-	99	52.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000010950	si:dkey-210j14.3	54	70.103	ENSCVAG00000023371	-	66	70.103	Cyprinodon_variegatus
ENSXCOG00000010950	si:dkey-210j14.3	56	69.828	ENSDARG00000089883	si:dkey-210j14.3	59	49.519	Danio_rerio
ENSXCOG00000010950	si:dkey-210j14.3	73	51.220	ENSEBUG00000011730	-	51	51.220	Eptatretus_burgeri
ENSXCOG00000010950	si:dkey-210j14.3	66	42.718	ENSEBUG00000014042	-	55	42.718	Eptatretus_burgeri
ENSXCOG00000010950	si:dkey-210j14.3	56	52.128	ENSEBUG00000010204	-	68	52.128	Eptatretus_burgeri
ENSXCOG00000010950	si:dkey-210j14.3	56	48.571	ENSGAFG00000014563	-	51	48.571	Gambusia_affinis
ENSXCOG00000010950	si:dkey-210j14.3	72	49.138	ENSHBUG00000009941	-	60	49.138	Haplochromis_burtoni
ENSXCOG00000010950	si:dkey-210j14.3	63	48.214	ENSKMAG00000019180	-	59	48.214	Kryptolebias_marmoratus
ENSXCOG00000010950	si:dkey-210j14.3	65	49.038	ENSLOCG00000018285	-	100	49.038	Lepisosteus_oculatus
ENSXCOG00000010950	si:dkey-210j14.3	61	83.810	ENSMMOG00000011435	-	83	83.810	Mola_mola
ENSXCOG00000010950	si:dkey-210j14.3	51	50.980	ENSORLG00000028457	-	87	50.649	Oryzias_latipes
ENSXCOG00000010950	si:dkey-210j14.3	57	47.297	ENSORLG00020006820	-	65	47.297	Oryzias_latipes_hni
ENSXCOG00000010950	si:dkey-210j14.3	73	54.651	ENSPREG00000004746	-	53	54.651	Poecilia_reticulata
ENSXCOG00000010950	si:dkey-210j14.3	79	49.138	ENSPNYG00000011973	-	86	49.138	Pundamilia_nyererei
ENSXCOG00000010950	si:dkey-210j14.3	56	53.846	ENSPNYG00000006306	-	99	53.846	Pundamilia_nyererei
ENSXCOG00000010950	si:dkey-210j14.3	70	77.570	ENSPNAG00000015513	si:dkey-210j14.3	98	77.570	Pygocentrus_nattereri
ENSXCOG00000010950	si:dkey-210j14.3	50	63.291	ENSXMAG00000022137	-	76	63.291	Xiphophorus_maculatus