EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000011073 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA2
Alias: wu:fa56c07|wu:fi27f11|zgc:66238
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 27101 bases
Position: chrKQ557204.1:30817475-30844575
Accession: 11098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000014590	ResIII	PF04851.15	1.9e-07	1	1
ENSXCOP00000014590	BRK	PF07533.16	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000014776	SMARCA2-201	4143	-	ENSXCOP00000014590	1380 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000011073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011073's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000011073	SMARCA2	52	35.197	ENSXCOG00000013840	hells	77	48.500
ENSXCOG00000011073	SMARCA2	95	71.757	ENSXCOG00000013494	-	88	71.621

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000011073	SMARCA2	97	79.335	ENSG00000080503	SMARCA2	99	98.000	Homo_sapiens
ENSXCOG00000011073	SMARCA2	99	88.785	ENSAPOG00000002641	SMARCA2	100	88.825	Acanthochromis_polyacanthus
ENSXCOG00000011073	SMARCA2	97	75.792	ENSAMEG00000012325	SMARCA2	99	75.907	Ailuropoda_melanoleuca
ENSXCOG00000011073	SMARCA2	99	87.772	ENSACIG00000015607	SMARCA2	89	87.772	Amphilophus_citrinellus
ENSXCOG00000011073	SMARCA2	99	87.960	ENSAOCG00000009647	-	90	88.040	Amphiprion_ocellaris
ENSXCOG00000011073	SMARCA2	99	88.324	ENSAPEG00000007646	SMARCA2	99	88.618	Amphiprion_percula
ENSXCOG00000011073	SMARCA2	99	87.570	ENSATEG00000006916	SMARCA2	89	87.807	Anabas_testudineus
ENSXCOG00000011073	SMARCA2	97	76.823	ENSAPLG00000013873	SMARCA2	75	82.548	Anas_platyrhynchos
ENSXCOG00000011073	SMARCA2	97	78.390	ENSACAG00000002423	SMARCA2	89	78.107	Anolis_carolinensis
ENSXCOG00000011073	SMARCA2	97	79.725	ENSANAG00000026498	SMARCA2	99	78.970	Aotus_nancymaae
ENSXCOG00000011073	SMARCA2	99	88.156	ENSACLG00000004248	SMARCA2	89	88.377	Astatotilapia_calliptera
ENSXCOG00000011073	SMARCA2	99	82.256	ENSAMXG00000012404	smarca2	90	81.272	Astyanax_mexicanus
ENSXCOG00000011073	SMARCA2	97	78.902	ENSBTAG00000007494	SMARCA2	89	79.435	Bos_taurus
ENSXCOG00000011073	SMARCA2	97	79.422	ENSCJAG00000010710	SMARCA2	99	79.944	Callithrix_jacchus
ENSXCOG00000011073	SMARCA2	97	79.103	ENSCAFG00000002013	SMARCA2	89	79.252	Canis_familiaris
ENSXCOG00000011073	SMARCA2	76	86.080	ENSCAFG00020026802	SMARCA2	87	86.080	Canis_lupus_dingo
ENSXCOG00000011073	SMARCA2	97	79.001	ENSCHIG00000025863	SMARCA2	89	79.435	Capra_hircus
ENSXCOG00000011073	SMARCA2	97	76.471	ENSTSYG00000003858	SMARCA2	91	79.428	Carlito_syrichta
ENSXCOG00000011073	SMARCA2	97	77.899	ENSCAPG00000002890	SMARCA2	90	77.738	Cavia_aperea
ENSXCOG00000011073	SMARCA2	97	79.263	ENSCPOG00000005475	SMARCA2	89	79.520	Cavia_porcellus
ENSXCOG00000011073	SMARCA2	97	79.884	ENSCCAG00000030636	SMARCA2	99	79.196	Cebus_capucinus
ENSXCOG00000011073	SMARCA2	97	78.777	ENSCATG00000031470	SMARCA2	99	78.582	Cercocebus_atys
ENSXCOG00000011073	SMARCA2	78	84.810	ENSCLAG00000014484	SMARCA2	89	79.310	Chinchilla_lanigera
ENSXCOG00000011073	SMARCA2	97	79.335	ENSCSAG00000008650	SMARCA2	95	79.859	Chlorocebus_sabaeus
ENSXCOG00000011073	SMARCA2	88	82.764	ENSCHOG00000004316	SMARCA2	79	82.764	Choloepus_hoffmanni
ENSXCOG00000011073	SMARCA2	95	82.445	ENSCPBG00000025463	SMARCA2	88	84.173	Chrysemys_picta_bellii
ENSXCOG00000011073	SMARCA2	97	79.725	ENSCANG00000039597	SMARCA2	98	80.028	Colobus_angolensis_palliatus
ENSXCOG00000011073	SMARCA2	97	74.106	ENSCGRG00001002323	Smarca2	89	73.993	Cricetulus_griseus_chok1gshd
ENSXCOG00000011073	SMARCA2	99	83.832	ENSCSEG00000019311	SMARCA2	89	83.869	Cynoglossus_semilaevis
ENSXCOG00000011073	SMARCA2	94	91.225	ENSCVAG00000016571	SMARCA2	98	91.225	Cyprinodon_variegatus
ENSXCOG00000011073	SMARCA2	99	81.246	ENSDARG00000008904	smarca2	90	81.307	Danio_rerio
ENSXCOG00000011073	SMARCA2	97	78.959	ENSDNOG00000006402	SMARCA2	89	79.073	Dasypus_novemcinctus
ENSXCOG00000011073	SMARCA2	97	80.058	ENSDORG00000014832	Smarca2	89	79.605	Dipodomys_ordii
ENSXCOG00000011073	SMARCA2	79	61.901	FBgn0000212	brm	67	61.681	Drosophila_melanogaster
ENSXCOG00000011073	SMARCA2	89	59.024	ENSEBUG00000002449	-	89	59.660	Eptatretus_burgeri
ENSXCOG00000011073	SMARCA2	99	69.468	ENSEBUG00000011442	-	92	69.286	Eptatretus_burgeri
ENSXCOG00000011073	SMARCA2	97	79.191	ENSEASG00005010312	SMARCA2	89	79.576	Equus_asinus_asinus
ENSXCOG00000011073	SMARCA2	64	78.378	ENSEEUG00000015540	-	61	78.378	Erinaceus_europaeus
ENSXCOG00000011073	SMARCA2	99	80.115	ENSELUG00000010318	smarca2	96	77.732	Esox_lucius
ENSXCOG00000011073	SMARCA2	97	78.928	ENSFCAG00000001568	SMARCA2	89	79.223	Felis_catus
ENSXCOG00000011073	SMARCA2	97	78.530	ENSFALG00000010416	SMARCA2	88	79.954	Ficedula_albicollis
ENSXCOG00000011073	SMARCA2	97	80.044	ENSFDAG00000010502	SMARCA2	89	78.431	Fukomys_damarensis
ENSXCOG00000011073	SMARCA2	99	93.880	ENSFHEG00000021250	SMARCA2	88	93.737	Fundulus_heteroclitus
ENSXCOG00000011073	SMARCA2	99	80.113	ENSGMOG00000014229	SMARCA2	90	79.717	Gadus_morhua
ENSXCOG00000011073	SMARCA2	97	78.665	ENSGALG00000010164	SMARCA2	89	78.929	Gallus_gallus
ENSXCOG00000011073	SMARCA2	95	95.833	ENSGAFG00000001164	SMARCA2	87	95.833	Gambusia_affinis
ENSXCOG00000011073	SMARCA2	99	84.723	ENSGACG00000014488	SMARCA2	90	83.941	Gasterosteus_aculeatus
ENSXCOG00000011073	SMARCA2	97	77.539	ENSGAGG00000024412	SMARCA2	89	78.561	Gopherus_agassizii
ENSXCOG00000011073	SMARCA2	88	85.945	ENSGGOG00000000513	SMARCA2	73	83.989	Gorilla_gorilla
ENSXCOG00000011073	SMARCA2	99	88.298	ENSHBUG00000006691	SMARCA2	90	87.579	Haplochromis_burtoni
ENSXCOG00000011073	SMARCA2	97	79.308	ENSHGLG00000005215	SMARCA2	89	79.047	Heterocephalus_glaber_female
ENSXCOG00000011073	SMARCA2	97	79.605	ENSHGLG00100010496	SMARCA2	89	78.884	Heterocephalus_glaber_male
ENSXCOG00000011073	SMARCA2	99	81.155	ENSHCOG00000015348	-	100	80.302	Hippocampus_comes
ENSXCOG00000011073	SMARCA2	99	83.417	ENSIPUG00000011060	smarca2	97	83.069	Ictalurus_punctatus
ENSXCOG00000011073	SMARCA2	97	80.029	ENSSTOG00000006812	SMARCA2	90	79.225	Ictidomys_tridecemlineatus
ENSXCOG00000011073	SMARCA2	97	79.622	ENSJJAG00000010867	Smarca2	89	78.803	Jaculus_jaculus
ENSXCOG00000011073	SMARCA2	99	87.517	ENSKMAG00000015844	-	89	88.003	Kryptolebias_marmoratus
ENSXCOG00000011073	SMARCA2	52	62.060	ENSLACG00000000270	SMARCA2	59	74.797	Latimeria_chalumnae
ENSXCOG00000011073	SMARCA2	97	80.664	ENSLOCG00000011499	smarca2	70	86.791	Lepisosteus_oculatus
ENSXCOG00000011073	SMARCA2	97	78.233	ENSLAFG00000014061	SMARCA2	89	78.297	Loxodonta_africana
ENSXCOG00000011073	SMARCA2	97	80.044	ENSMFAG00000003814	SMARCA2	98	79.590	Macaca_fascicularis
ENSXCOG00000011073	SMARCA2	97	80.014	ENSMMUG00000015279	SMARCA2	94	80.240	Macaca_mulatta
ENSXCOG00000011073	SMARCA2	97	79.768	ENSMNEG00000041069	SMARCA2	99	80.142	Macaca_nemestrina
ENSXCOG00000011073	SMARCA2	97	79.678	ENSMLEG00000027418	SMARCA2	99	78.239	Mandrillus_leucophaeus
ENSXCOG00000011073	SMARCA2	99	90.576	ENSMAMG00000003056	SMARCA2	100	90.647	Mastacembelus_armatus
ENSXCOG00000011073	SMARCA2	99	88.156	ENSMZEG00005020709	SMARCA2	90	87.439	Maylandia_zebra
ENSXCOG00000011073	SMARCA2	82	65.339	ENSMGAG00000005160	-	99	59.744	Meleagris_gallopavo
ENSXCOG00000011073	SMARCA2	97	79.942	ENSMICG00000005162	SMARCA2	99	78.805	Microcebus_murinus
ENSXCOG00000011073	SMARCA2	97	80.058	ENSMOCG00000001611	Smarca2	89	79.605	Microtus_ochrogaster
ENSXCOG00000011073	SMARCA2	99	87.706	ENSMMOG00000014196	SMARCA2	91	87.706	Mola_mola
ENSXCOG00000011073	SMARCA2	97	78.320	ENSMODG00000003578	SMARCA2	89	78.788	Monodelphis_domestica
ENSXCOG00000011073	SMARCA2	99	90.459	ENSMALG00000009611	SMARCA2	89	90.316	Monopterus_albus
ENSXCOG00000011073	SMARCA2	97	79.092	MGP_CAROLIEiJ_G0022841	Smarca2	93	78.531	Mus_caroli
ENSXCOG00000011073	SMARCA2	97	79.582	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSXCOG00000011073	SMARCA2	97	79.522	MGP_PahariEiJ_G0014334	Smarca2	93	78.947	Mus_pahari
ENSXCOG00000011073	SMARCA2	97	79.092	MGP_SPRETEiJ_G0023759	Smarca2	83	91.239	Mus_spretus
ENSXCOG00000011073	SMARCA2	77	84.721	ENSMPUG00000005171	SMARCA2	80	85.178	Mustela_putorius_furo
ENSXCOG00000011073	SMARCA2	97	74.058	ENSMLUG00000002342	SMARCA2	71	79.842	Myotis_lucifugus
ENSXCOG00000011073	SMARCA2	97	79.215	ENSNGAG00000000108	Smarca2	88	79.066	Nannospalax_galili
ENSXCOG00000011073	SMARCA2	94	79.909	ENSNBRG00000017998	SMARCA2	94	82.587	Neolamprologus_brichardi
ENSXCOG00000011073	SMARCA2	97	79.094	ENSNLEG00000008575	SMARCA2	98	77.738	Nomascus_leucogenys
ENSXCOG00000011073	SMARCA2	97	73.677	ENSMEUG00000009812	SMARCA2	88	74.150	Notamacropus_eugenii
ENSXCOG00000011073	SMARCA2	77	79.436	ENSOPRG00000013474	SMARCA2	89	74.667	Ochotona_princeps
ENSXCOG00000011073	SMARCA2	97	78.823	ENSODEG00000005452	SMARCA2	89	78.977	Octodon_degus
ENSXCOG00000011073	SMARCA2	99	87.074	ENSONIG00000014163	SMARCA2	71	90.869	Oreochromis_niloticus
ENSXCOG00000011073	SMARCA2	53	83.926	ENSOANG00000008299	-	95	85.714	Ornithorhynchus_anatinus
ENSXCOG00000011073	SMARCA2	77	85.558	ENSOCUG00000006320	SMARCA2	89	79.410	Oryctolagus_cuniculus
ENSXCOG00000011073	SMARCA2	99	88.061	ENSORLG00000020820	SMARCA2	100	88.278	Oryzias_latipes
ENSXCOG00000011073	SMARCA2	99	88.116	ENSORLG00015006289	SMARCA2	99	88.333	Oryzias_latipes_hsok
ENSXCOG00000011073	SMARCA2	99	87.349	ENSOMEG00000009736	-	93	86.454	Oryzias_melastigma
ENSXCOG00000011073	SMARCA2	78	84.581	ENSOGAG00000017053	SMARCA2	89	77.500	Otolemur_garnettii
ENSXCOG00000011073	SMARCA2	97	78.129	ENSOARG00000013265	SMARCA2	89	79.249	Ovis_aries
ENSXCOG00000011073	SMARCA2	89	85.874	ENSPPAG00000038717	SMARCA2	98	77.614	Pan_paniscus
ENSXCOG00000011073	SMARCA2	97	78.959	ENSPPRG00000001879	SMARCA2	89	79.111	Panthera_pardus
ENSXCOG00000011073	SMARCA2	97	79.724	ENSPTRG00000051168	SMARCA2	98	79.520	Pan_troglodytes
ENSXCOG00000011073	SMARCA2	97	75.925	ENSPANG00000025121	SMARCA2	89	76.308	Papio_anubis
ENSXCOG00000011073	SMARCA2	99	81.754	ENSPKIG00000018469	-	89	81.405	Paramormyrops_kingsleyae
ENSXCOG00000011073	SMARCA2	97	77.237	ENSPSIG00000006284	SMARCA2	89	78.114	Pelodiscus_sinensis
ENSXCOG00000011073	SMARCA2	99	83.251	ENSPMGG00000013696	-	91	83.251	Periophthalmus_magnuspinnatus
ENSXCOG00000011073	SMARCA2	97	79.303	ENSPEMG00000019821	Smarca2	89	78.521	Peromyscus_maniculatus_bairdii
ENSXCOG00000011073	SMARCA2	99	67.840	ENSPMAG00000005337	-	91	65.629	Petromyzon_marinus
ENSXCOG00000011073	SMARCA2	97	78.654	ENSPCIG00000015658	SMARCA2	89	78.743	Phascolarctos_cinereus
ENSXCOG00000011073	SMARCA2	99	93.343	ENSPFOG00000001856	SMARCA2	90	93.343	Poecilia_formosa
ENSXCOG00000011073	SMARCA2	99	93.412	ENSPLAG00000017829	SMARCA2	89	91.667	Poecilia_latipinna
ENSXCOG00000011073	SMARCA2	99	94.143	ENSPMEG00000001815	-	90	93.343	Poecilia_mexicana
ENSXCOG00000011073	SMARCA2	99	95.571	ENSPREG00000013800	SMARCA2	92	93.412	Poecilia_reticulata
ENSXCOG00000011073	SMARCA2	97	79.754	ENSPPYG00000019258	SMARCA2	89	80.127	Pongo_abelii
ENSXCOG00000011073	SMARCA2	73	75.704	ENSPCAG00000016969	SMARCA2	67	75.704	Procavia_capensis
ENSXCOG00000011073	SMARCA2	97	77.826	ENSPCOG00000025709	SMARCA2	99	77.596	Propithecus_coquereli
ENSXCOG00000011073	SMARCA2	88	80.892	ENSPVAG00000000901	SMARCA2	82	80.414	Pteropus_vampyrus
ENSXCOG00000011073	SMARCA2	99	84.958	ENSPNYG00000004533	SMARCA2	89	85.046	Pundamilia_nyererei
ENSXCOG00000011073	SMARCA2	99	81.958	ENSPNAG00000014635	smarca2	89	82.098	Pygocentrus_nattereri
ENSXCOG00000011073	SMARCA2	97	79.595	ENSRNOG00000011931	Smarca2	94	78.877	Rattus_norvegicus
ENSXCOG00000011073	SMARCA2	97	79.898	ENSRBIG00000038618	SMARCA2	99	79.447	Rhinopithecus_bieti
ENSXCOG00000011073	SMARCA2	97	80.058	ENSRROG00000019271	SMARCA2	99	79.788	Rhinopithecus_roxellana
ENSXCOG00000011073	SMARCA2	97	78.100	ENSSBOG00000034827	SMARCA2	89	78.132	Saimiri_boliviensis_boliviensis
ENSXCOG00000011073	SMARCA2	97	78.536	ENSSHAG00000007884	SMARCA2	85	83.815	Sarcophilus_harrisii
ENSXCOG00000011073	SMARCA2	100	82.673	ENSSFOG00015014870	SMARCA2	97	82.100	Scleropages_formosus
ENSXCOG00000011073	SMARCA2	99	87.948	ENSSMAG00000013707	SMARCA2	89	88.092	Scophthalmus_maximus
ENSXCOG00000011073	SMARCA2	99	89.828	ENSSDUG00000008852	-	89	89.166	Seriola_dumerili
ENSXCOG00000011073	SMARCA2	99	88.778	ENSSLDG00000025449	SMARCA2	89	88.478	Seriola_lalandi_dorsalis
ENSXCOG00000011073	SMARCA2	91	66.769	ENSSARG00000007888	SMARCA2	83	67.313	Sorex_araneus
ENSXCOG00000011073	SMARCA2	94	77.391	ENSSPUG00000001629	SMARCA2	88	78.411	Sphenodon_punctatus
ENSXCOG00000011073	SMARCA2	99	90.593	ENSSPAG00000020091	-	92	90.672	Stegastes_partitus
ENSXCOG00000011073	SMARCA2	97	79.290	ENSSSCG00000005232	SMARCA2	89	79.293	Sus_scrofa
ENSXCOG00000011073	SMARCA2	97	78.098	ENSTGUG00000005460	SMARCA2	89	78.361	Taeniopygia_guttata
ENSXCOG00000011073	SMARCA2	99	85.528	ENSTRUG00000015619	SMARCA2	90	85.039	Takifugu_rubripes
ENSXCOG00000011073	SMARCA2	66	97.619	ENSTBEG00000008767	SMARCA2	66	97.619	Tupaia_belangeri
ENSXCOG00000011073	SMARCA2	97	78.696	ENSTTRG00000002033	SMARCA2	88	79.320	Tursiops_truncatus
ENSXCOG00000011073	SMARCA2	97	78.905	ENSUAMG00000024701	SMARCA2	99	78.101	Ursus_americanus
ENSXCOG00000011073	SMARCA2	88	76.727	ENSVPAG00000001204	SMARCA2	85	76.818	Vicugna_pacos
ENSXCOG00000011073	SMARCA2	76	86.093	ENSVVUG00000004598	SMARCA2	89	86.093	Vulpes_vulpes
ENSXCOG00000011073	SMARCA2	99	74.451	ENSXETG00000015299	smarca2	71	80.139	Xenopus_tropicalis
ENSXCOG00000011073	SMARCA2	99	97.713	ENSXMAG00000015611	SMARCA2	88	97.713	Xiphophorus_maculatus