EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000011207 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-217k17.7
Alias: im:7155625
Full Name: si:ch211-217k17.7
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 1813 bases
Position: chrKQ557220.1:15162297-15164109
Accession: ZDB-GENE-061009-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000014778	Cgr1	PF03879.14	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000014964	-	879	-	ENSXCOP00000014778	292 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000011207's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011207's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000011207	si:ch211-217k17.7	100	63.423	ENSAPOG00000010968	si:ch211-217k17.7	100	64.214	Acanthochromis_polyacanthus
ENSXCOG00000011207	si:ch211-217k17.7	100	62.914	ENSACIG00000020679	si:ch211-217k17.7	88	62.914	Amphilophus_citrinellus
ENSXCOG00000011207	si:ch211-217k17.7	100	61.745	ENSAOCG00000006303	si:ch211-217k17.7	100	63.423	Amphiprion_ocellaris
ENSXCOG00000011207	si:ch211-217k17.7	100	61.409	ENSAPEG00000015364	si:ch211-217k17.7	100	63.087	Amphiprion_percula
ENSXCOG00000011207	si:ch211-217k17.7	100	58.528	ENSATEG00000016386	si:ch211-217k17.7	93	63.309	Anabas_testudineus
ENSXCOG00000011207	si:ch211-217k17.7	50	57.895	ENSACAG00000017814	CCDC86	91	59.211	Anolis_carolinensis
ENSXCOG00000011207	si:ch211-217k17.7	50	59.763	ENSAMXG00000037666	si:ch211-217k17.7	78	59.763	Astyanax_mexicanus
ENSXCOG00000011207	si:ch211-217k17.7	98	55.442	ENSCSEG00000002637	si:ch211-217k17.7	97	56.040	Cynoglossus_semilaevis
ENSXCOG00000011207	si:ch211-217k17.7	100	72.881	ENSCVAG00000003135	si:ch211-217k17.7	100	72.881	Cyprinodon_variegatus
ENSXCOG00000011207	si:ch211-217k17.7	85	49.231	ENSDARG00000059908	si:ch211-217k17.7	85	48.249	Danio_rerio
ENSXCOG00000011207	si:ch211-217k17.7	85	54.826	ENSELUG00000022687	si:ch211-217k17.7	84	54.826	Esox_lucius
ENSXCOG00000011207	si:ch211-217k17.7	86	51.923	ENSGMOG00000016242	-	91	50.730	Gadus_morhua
ENSXCOG00000011207	si:ch211-217k17.7	100	86.735	ENSGAFG00000005681	si:ch211-217k17.7	100	89.796	Gambusia_affinis
ENSXCOG00000011207	si:ch211-217k17.7	84	57.708	ENSGACG00000017630	si:ch211-217k17.7	99	58.103	Gasterosteus_aculeatus
ENSXCOG00000011207	si:ch211-217k17.7	94	61.429	ENSHBUG00000010352	si:ch211-217k17.7	100	60.726	Haplochromis_burtoni
ENSXCOG00000011207	si:ch211-217k17.7	100	67.677	ENSKMAG00000000919	si:ch211-217k17.7	99	68.013	Kryptolebias_marmoratus
ENSXCOG00000011207	si:ch211-217k17.7	97	57.093	ENSLBEG00000020547	-	93	58.276	Labrus_bergylta
ENSXCOG00000011207	si:ch211-217k17.7	64	47.895	ENSLAFG00000009449	CCDC86	51	49.474	Loxodonta_africana
ENSXCOG00000011207	si:ch211-217k17.7	65	46.602	ENSMLEG00000035102	-	57	47.573	Mandrillus_leucophaeus
ENSXCOG00000011207	si:ch211-217k17.7	98	62.712	ENSMAMG00000016395	si:ch211-217k17.7	99	62.373	Mastacembelus_armatus
ENSXCOG00000011207	si:ch211-217k17.7	100	59.736	ENSMZEG00005019822	si:ch211-217k17.7	100	60.726	Maylandia_zebra
ENSXCOG00000011207	si:ch211-217k17.7	100	59.396	ENSMMOG00000006446	si:ch211-217k17.7	100	59.060	Mola_mola
ENSXCOG00000011207	si:ch211-217k17.7	60	49.738	MGP_CAROLIEiJ_G0022707	-	56	50.000	Mus_caroli
ENSXCOG00000011207	si:ch211-217k17.7	62	49.223	MGP_SPRETEiJ_G0023621	Ccdc86	53	50.259	Mus_spretus
ENSXCOG00000011207	si:ch211-217k17.7	65	49.485	ENSNGAG00000013322	Ccdc86	51	50.515	Nannospalax_galili
ENSXCOG00000011207	si:ch211-217k17.7	100	57.860	ENSNBRG00000013330	-	82	80.612	Neolamprologus_brichardi
ENSXCOG00000011207	si:ch211-217k17.7	100	61.000	ENSONIG00000017568	si:ch211-217k17.7	100	61.667	Oreochromis_niloticus
ENSXCOG00000011207	si:ch211-217k17.7	92	55.596	ENSORLG00000006331	-	96	56.679	Oryzias_latipes
ENSXCOG00000011207	si:ch211-217k17.7	92	55.882	ENSORLG00020021345	si:ch211-217k17.7	96	57.246	Oryzias_latipes_hni
ENSXCOG00000011207	si:ch211-217k17.7	92	55.957	ENSORLG00015021538	si:ch211-217k17.7	96	57.040	Oryzias_latipes_hsok
ENSXCOG00000011207	si:ch211-217k17.7	85	52.453	ENSOMEG00000007064	si:ch211-217k17.7	91	52.453	Oryzias_melastigma
ENSXCOG00000011207	si:ch211-217k17.7	95	45.302	ENSPKIG00000016503	si:ch211-217k17.7	97	46.512	Paramormyrops_kingsleyae
ENSXCOG00000011207	si:ch211-217k17.7	84	60.324	ENSPMGG00000023665	si:ch211-217k17.7	92	59.623	Periophthalmus_magnuspinnatus
ENSXCOG00000011207	si:ch211-217k17.7	72	46.025	ENSPEMG00000015052	Ccdc86	69	46.862	Peromyscus_maniculatus_bairdii
ENSXCOG00000011207	si:ch211-217k17.7	98	89.456	ENSPFOG00000011617	si:ch211-217k17.7	99	92.517	Poecilia_formosa
ENSXCOG00000011207	si:ch211-217k17.7	98	89.116	ENSPLAG00000016122	si:ch211-217k17.7	99	92.177	Poecilia_latipinna
ENSXCOG00000011207	si:ch211-217k17.7	100	89.000	ENSPMEG00000018535	si:ch211-217k17.7	100	92.000	Poecilia_mexicana
ENSXCOG00000011207	si:ch211-217k17.7	100	90.000	ENSPREG00000005478	si:ch211-217k17.7	100	90.000	Poecilia_reticulata
ENSXCOG00000011207	si:ch211-217k17.7	71	52.607	ENSPNAG00000010886	si:ch211-217k17.7	85	52.736	Pygocentrus_nattereri
ENSXCOG00000011207	si:ch211-217k17.7	72	45.726	ENSRNOG00000020925	Ccdc86	69	46.581	Rattus_norvegicus
ENSXCOG00000011207	si:ch211-217k17.7	93	63.273	ENSSMAG00000007686	si:ch211-217k17.7	91	60.000	Scophthalmus_maximus
ENSXCOG00000011207	si:ch211-217k17.7	86	61.660	ENSSDUG00000002689	si:ch211-217k17.7	94	58.909	Seriola_dumerili
ENSXCOG00000011207	si:ch211-217k17.7	90	63.158	ENSSLDG00000016681	si:ch211-217k17.7	99	59.223	Seriola_lalandi_dorsalis
ENSXCOG00000011207	si:ch211-217k17.7	100	63.545	ENSSPAG00000000367	si:ch211-217k17.7	100	65.552	Stegastes_partitus
ENSXCOG00000011207	si:ch211-217k17.7	98	52.083	ENSTRUG00000024101	si:ch211-217k17.7	100	52.083	Takifugu_rubripes
ENSXCOG00000011207	si:ch211-217k17.7	100	97.959	ENSXMAG00000005529	si:ch211-217k17.7	100	97.959	Xiphophorus_maculatus