EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000011238 (Gene tree)
Gene ID: -
Gene Symbol: rrp36
Alias: cb268|sb:cb268|si:dkey-236e20.6
Full Name: ribosomal RNA processing 36
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 7477 bases
Position: chrKQ557220.1:4759933-4767409
Accession: ZDB-GENE-030131-9751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000014835	RRP36	PF06102.12	1.5e-41	1	1
ENSXCOP00000014834	RRP36	PF06102.12	3.1e-34	1	2
ENSXCOP00000014834	RRP36	PF06102.12	3.1e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000015020	-	597	-	ENSXCOP00000014834	198 (aa)	-	-
ENSXCOT00000015021	-	1107	-	ENSXCOP00000014835	368 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000011238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011238's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000011238	rrp36	88	48.571	ENSG00000124541	RRP36	79	65.217	Homo_sapiens
ENSXCOG00000011238	rrp36	89	63.861	ENSAPOG00000022015	rrp36	87	64.854	Acanthochromis_polyacanthus
ENSXCOG00000011238	rrp36	89	66.500	ENSACIG00000020578	-	70	66.197	Amphilophus_citrinellus
ENSXCOG00000011238	rrp36	89	64.423	ENSAOCG00000013439	rrp36	71	72.727	Amphiprion_ocellaris
ENSXCOG00000011238	rrp36	89	64.423	ENSAPEG00000020996	rrp36	71	72.727	Amphiprion_percula
ENSXCOG00000011238	rrp36	89	65.865	ENSATEG00000016946	rrp36	67	72.727	Anabas_testudineus
ENSXCOG00000011238	rrp36	91	48.372	ENSANAG00000021773	RRP36	90	48.707	Aotus_nancymaae
ENSXCOG00000011238	rrp36	89	64.550	ENSACLG00000008408	rrp36	98	64.192	Astatotilapia_calliptera
ENSXCOG00000011238	rrp36	91	71.123	ENSACLG00000013982	RRP36	87	71.123	Astatotilapia_calliptera
ENSXCOG00000011238	rrp36	89	45.327	ENSBTAG00000053873	RRP36	95	45.868	Bos_taurus
ENSXCOG00000011238	rrp36	88	47.619	ENSCJAG00000004943	RRP36	91	48.707	Callithrix_jacchus
ENSXCOG00000011238	rrp36	90	46.479	ENSCAFG00020011057	RRP36	90	49.763	Canis_lupus_dingo
ENSXCOG00000011238	rrp36	88	40.816	ENSCHIG00000019781	-	93	38.158	Capra_hircus
ENSXCOG00000011238	rrp36	82	45.685	ENSCHIG00000003210	-	88	50.000	Capra_hircus
ENSXCOG00000011238	rrp36	90	45.327	ENSCHIG00000016354	-	84	49.765	Capra_hircus
ENSXCOG00000011238	rrp36	88	46.190	ENSTSYG00000037176	RRP36	90	47.186	Carlito_syrichta
ENSXCOG00000011238	rrp36	87	49.029	ENSCAPG00000010983	RRP36	89	51.691	Cavia_aperea
ENSXCOG00000011238	rrp36	89	48.325	ENSCPOG00000025932	RRP36	93	50.952	Cavia_porcellus
ENSXCOG00000011238	rrp36	88	47.619	ENSCCAG00000000048	RRP36	90	48.276	Cebus_capucinus
ENSXCOG00000011238	rrp36	88	47.143	ENSCATG00000041903	RRP36	89	48.908	Cercocebus_atys
ENSXCOG00000011238	rrp36	90	46.948	ENSCLAG00000013166	RRP36	94	50.472	Chinchilla_lanigera
ENSXCOG00000011238	rrp36	88	47.143	ENSCSAG00000011553	RRP36	89	48.908	Chlorocebus_sabaeus
ENSXCOG00000011238	rrp36	89	51.675	ENSCPBG00000003555	RRP36	62	52.814	Chrysemys_picta_bellii
ENSXCOG00000011238	rrp36	50	34.197	ENSCSAVG00000002672	-	85	34.715	Ciona_savignyi
ENSXCOG00000011238	rrp36	88	47.143	ENSCANG00000035127	RRP36	83	50.711	Colobus_angolensis_palliatus
ENSXCOG00000011238	rrp36	90	45.238	ENSCGRG00001021461	Rrp36	92	49.524	Cricetulus_griseus_chok1gshd
ENSXCOG00000011238	rrp36	90	45.238	ENSCGRG00000006286	Rrp36	92	49.524	Cricetulus_griseus_crigri
ENSXCOG00000011238	rrp36	92	57.209	ENSCSEG00000001039	RRP36	69	68.304	Cynoglossus_semilaevis
ENSXCOG00000011238	rrp36	93	71.090	ENSCVAG00000017798	rrp36	96	71.090	Cyprinodon_variegatus
ENSXCOG00000011238	rrp36	91	50.472	ENSDARG00000032516	rrp36	72	59.740	Danio_rerio
ENSXCOG00000011238	rrp36	90	42.857	ENSDORG00000012186	Rrp36	93	47.248	Dipodomys_ordii
ENSXCOG00000011238	rrp36	89	30.374	FBgn0038235	CG8461	91	32.889	Drosophila_melanogaster
ENSXCOG00000011238	rrp36	93	46.396	ENSEASG00005003169	RRP36	92	51.185	Equus_asinus_asinus
ENSXCOG00000011238	rrp36	93	45.946	ENSECAG00000040238	RRP36	92	51.185	Equus_caballus
ENSXCOG00000011238	rrp36	89	38.785	ENSEEUG00000010515	RRP36	92	40.000	Erinaceus_europaeus
ENSXCOG00000011238	rrp36	89	59.330	ENSELUG00000016840	rrp36	63	66.964	Esox_lucius
ENSXCOG00000011238	rrp36	89	46.729	ENSFCAG00000043818	RRP36	87	49.772	Felis_catus
ENSXCOG00000011238	rrp36	89	45.413	ENSFDAG00000010380	RRP36	98	49.091	Fukomys_damarensis
ENSXCOG00000011238	rrp36	70	71.341	ENSFHEG00000000761	rrp36	85	79.412	Fundulus_heteroclitus
ENSXCOG00000011238	rrp36	100	80.593	ENSGAFG00000017817	rrp36	66	93.562	Gambusia_affinis
ENSXCOG00000011238	rrp36	89	63.380	ENSGACG00000019603	RRP36	70	69.528	Gasterosteus_aculeatus
ENSXCOG00000011238	rrp36	88	47.143	ENSGGOG00000037384	RRP36	90	48.908	Gorilla_gorilla
ENSXCOG00000011238	rrp36	89	61.538	ENSHBUG00000008974	RRP36	71	68.831	Haplochromis_burtoni
ENSXCOG00000011238	rrp36	91	46.047	ENSHGLG00000018082	RRP36	83	50.711	Heterocephalus_glaber_female
ENSXCOG00000011238	rrp36	91	46.047	ENSHGLG00100019303	RRP36	83	50.711	Heterocephalus_glaber_male
ENSXCOG00000011238	rrp36	95	44.928	ENSHCOG00000010303	rrp36	86	45.411	Hippocampus_comes
ENSXCOG00000011238	rrp36	89	53.140	ENSIPUG00000016548	rrp36	72	57.477	Ictalurus_punctatus
ENSXCOG00000011238	rrp36	91	45.581	ENSSTOG00000009511	RRP36	97	47.639	Ictidomys_tridecemlineatus
ENSXCOG00000011238	rrp36	90	47.393	ENSJJAG00000023363	Rrp36	94	49.065	Jaculus_jaculus
ENSXCOG00000011238	rrp36	99	59.946	ENSKMAG00000006968	rrp36	66	74.348	Kryptolebias_marmoratus
ENSXCOG00000011238	rrp36	89	55.462	ENSLBEG00000017728	-	70	59.615	Labrus_bergylta
ENSXCOG00000011238	rrp36	89	50.239	ENSLACG00000001888	rrp36	69	57.534	Latimeria_chalumnae
ENSXCOG00000011238	rrp36	89	54.808	ENSLOCG00000015862	RRP36	65	60.086	Lepisosteus_oculatus
ENSXCOG00000011238	rrp36	88	44.762	ENSLAFG00000032704	RRP36	98	47.945	Loxodonta_africana
ENSXCOG00000011238	rrp36	88	47.143	ENSMFAG00000003547	RRP36	89	48.908	Macaca_fascicularis
ENSXCOG00000011238	rrp36	88	46.667	ENSMNEG00000044747	RRP36	89	48.472	Macaca_nemestrina
ENSXCOG00000011238	rrp36	88	47.143	ENSMLEG00000034272	RRP36	89	48.908	Mandrillus_leucophaeus
ENSXCOG00000011238	rrp36	89	66.029	ENSMAMG00000019157	-	61	72.646	Mastacembelus_armatus
ENSXCOG00000011238	rrp36	89	62.019	ENSMZEG00005015204	RRP36	71	69.697	Maylandia_zebra
ENSXCOG00000011238	rrp36	90	45.455	ENSMAUG00000003648	Rrp36	95	48.113	Mesocricetus_auratus
ENSXCOG00000011238	rrp36	88	45.714	ENSMICG00000045230	RRP36	83	49.763	Microcebus_murinus
ENSXCOG00000011238	rrp36	90	44.976	ENSMOCG00000002009	Rrp36	87	47.222	Microtus_ochrogaster
ENSXCOG00000011238	rrp36	91	58.962	ENSMMOG00000018637	-	67	66.964	Mola_mola
ENSXCOG00000011238	rrp36	59	40.000	ENSMODG00000029304	-	81	40.964	Monodelphis_domestica
ENSXCOG00000011238	rrp36	89	63.942	ENSMALG00000008142	-	71	70.852	Monopterus_albus
ENSXCOG00000011238	rrp36	90	43.810	MGP_CAROLIEiJ_G0021680	Rrp36	86	48.341	Mus_caroli
ENSXCOG00000011238	rrp36	90	44.762	ENSMUSG00000023971	Rrp36	98	46.875	Mus_musculus
ENSXCOG00000011238	rrp36	90	45.024	MGP_PahariEiJ_G0020671	Rrp36	97	48.696	Mus_pahari
ENSXCOG00000011238	rrp36	90	44.286	MGP_SPRETEiJ_G0022592	Rrp36	90	46.288	Mus_spretus
ENSXCOG00000011238	rrp36	52	48.624	ENSNGAG00000021177	-	82	44.915	Nannospalax_galili
ENSXCOG00000011238	rrp36	88	47.143	ENSNLEG00000033289	RRP36	98	51.659	Nomascus_leucogenys
ENSXCOG00000011238	rrp36	69	44.586	ENSMEUG00000007149	-	97	48.171	Notamacropus_eugenii
ENSXCOG00000011238	rrp36	81	47.027	ENSOPRG00000002274	RRP36	68	55.030	Ochotona_princeps
ENSXCOG00000011238	rrp36	89	45.972	ENSODEG00000015915	RRP36	98	48.899	Octodon_degus
ENSXCOG00000011238	rrp36	99	54.223	ENSONIG00000015983	rrp36	73	69.565	Oreochromis_niloticus
ENSXCOG00000011238	rrp36	89	60.766	ENSORLG00000029500	rrp36	67	68.103	Oryzias_latipes
ENSXCOG00000011238	rrp36	89	60.476	ENSORLG00020017452	-	68	66.953	Oryzias_latipes_hni
ENSXCOG00000011238	rrp36	89	61.538	ENSORLG00015016898	rrp36	69	67.949	Oryzias_latipes_hsok
ENSXCOG00000011238	rrp36	89	61.836	ENSOMEG00000008623	RRP36	67	68.919	Oryzias_melastigma
ENSXCOG00000011238	rrp36	89	44.550	ENSOGAG00000012699	RRP36	98	46.256	Otolemur_garnettii
ENSXCOG00000011238	rrp36	88	41.117	ENSPPAG00000042831	-	89	40.175	Pan_paniscus
ENSXCOG00000011238	rrp36	89	47.196	ENSPPRG00000014610	RRP36	86	50.463	Panthera_pardus
ENSXCOG00000011238	rrp36	89	47.196	ENSPTIG00000010853	RRP36	86	50.463	Panthera_tigris_altaica
ENSXCOG00000011238	rrp36	88	47.143	ENSPTRG00000018184	RRP36	88	48.908	Pan_troglodytes
ENSXCOG00000011238	rrp36	88	47.143	ENSPANG00000025140	RRP36	89	48.908	Papio_anubis
ENSXCOG00000011238	rrp36	89	55.288	ENSPKIG00000004303	rrp36	65	62.780	Paramormyrops_kingsleyae
ENSXCOG00000011238	rrp36	94	55.556	ENSPMGG00000016870	rrp36	69	63.594	Periophthalmus_magnuspinnatus
ENSXCOG00000011238	rrp36	91	44.811	ENSPEMG00000007015	Rrp36	96	47.489	Peromyscus_maniculatus_bairdii
ENSXCOG00000011238	rrp36	90	44.393	ENSPCIG00000009179	RRP36	87	47.489	Phascolarctos_cinereus
ENSXCOG00000011238	rrp36	100	77.358	ENSPFOG00000011959	rrp36	61	89.831	Poecilia_formosa
ENSXCOG00000011238	rrp36	100	80.863	ENSPLAG00000023901	rrp36	67	90.254	Poecilia_latipinna
ENSXCOG00000011238	rrp36	100	79.784	ENSPMEG00000024099	rrp36	66	89.407	Poecilia_mexicana
ENSXCOG00000011238	rrp36	100	82.480	ENSPREG00000022787	rrp36	67	88.559	Poecilia_reticulata
ENSXCOG00000011238	rrp36	88	48.113	ENSPPYG00000016628	RRP36	81	51.659	Pongo_abelii
ENSXCOG00000011238	rrp36	88	44.762	ENSPCOG00000018401	RRP36	84	49.057	Propithecus_coquereli
ENSXCOG00000011238	rrp36	89	43.868	ENSPVAG00000008714	RRP36	91	46.753	Pteropus_vampyrus
ENSXCOG00000011238	rrp36	89	62.019	ENSPNYG00000018030	RRP36	71	69.697	Pundamilia_nyererei
ENSXCOG00000011238	rrp36	91	54.028	ENSPNAG00000027207	rrp36	62	57.207	Pygocentrus_nattereri
ENSXCOG00000011238	rrp36	90	46.667	ENSRNOG00000017836	Rrp36	86	50.237	Rattus_norvegicus
ENSXCOG00000011238	rrp36	88	47.143	ENSRBIG00000040019	RRP36	82	50.711	Rhinopithecus_bieti
ENSXCOG00000011238	rrp36	88	47.143	ENSRROG00000040721	RRP36	82	50.711	Rhinopithecus_roxellana
ENSXCOG00000011238	rrp36	88	47.393	ENSSBOG00000030228	RRP36	92	49.138	Saimiri_boliviensis_boliviensis
ENSXCOG00000011238	rrp36	89	55.288	ENSSFOG00015023058	rrp36	66	60.731	Scleropages_formosus
ENSXCOG00000011238	rrp36	89	63.942	ENSSMAG00000020911	-	63	69.869	Scophthalmus_maximus
ENSXCOG00000011238	rrp36	89	67.308	ENSSDUG00000018924	rrp36	64	73.160	Seriola_dumerili
ENSXCOG00000011238	rrp36	95	62.500	ENSSLDG00000019741	RRP36	96	75.980	Seriola_lalandi_dorsalis
ENSXCOG00000011238	rrp36	88	45.673	ENSSARG00000000873	RRP36	97	48.571	Sorex_araneus
ENSXCOG00000011238	rrp36	90	50.952	ENSSPUG00000000213	RRP36	60	55.300	Sphenodon_punctatus
ENSXCOG00000011238	rrp36	89	66.154	ENSSPAG00000017154	rrp36	82	58.369	Stegastes_partitus
ENSXCOG00000011238	rrp36	88	46.698	ENSSSCG00000001656	RRP36	86	48.214	Sus_scrofa
ENSXCOG00000011238	rrp36	81	42.690	ENSSSCG00000037862	-	84	42.690	Sus_scrofa
ENSXCOG00000011238	rrp36	91	60.377	ENSTRUG00000021893	rrp36	71	67.811	Takifugu_rubripes
ENSXCOG00000011238	rrp36	94	59.091	ENSTNIG00000004741	rrp36	87	63.362	Tetraodon_nigroviridis
ENSXCOG00000011238	rrp36	88	38.889	ENSTBEG00000012326	RRP36	98	42.654	Tupaia_belangeri
ENSXCOG00000011238	rrp36	88	45.972	ENSTTRG00000007001	RRP36	90	46.862	Tursiops_truncatus
ENSXCOG00000011238	rrp36	89	45.283	ENSUAMG00000015865	RRP36	87	50.233	Ursus_americanus
ENSXCOG00000011238	rrp36	68	49.686	ENSUMAG00000008726	RRP36	98	54.717	Ursus_maritimus
ENSXCOG00000011238	rrp36	88	48.113	ENSVPAG00000008904	RRP36	98	50.917	Vicugna_pacos
ENSXCOG00000011238	rrp36	90	46.479	ENSVVUG00000027816	RRP36	90	49.763	Vulpes_vulpes