EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000011240 (Gene tree)
Gene ID: -
Gene Symbol: wdr43
Alias: kiaa0007l|un-named hi821a|unm hi821a|wdr43l|wu:fb83h12|wu:fc13e01|zgc:110501
Full Name: WD repeat domain 43
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 14165 bases
Position: chrKQ557211.1:11509287-11523451
Accession: ZDB-GENE-021231-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000014833	Utp12	PF04003.12	5.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000015019	-	1881	-	ENSXCOP00000014833	626 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000011240's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011240's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000011240	wdr43	88	55.712	ENSG00000163811	WDR43	100	56.463	Homo_sapiens
ENSXCOG00000011240	wdr43	99	80.710	ENSAPOG00000020303	wdr43	92	87.611	Acanthochromis_polyacanthus
ENSXCOG00000011240	wdr43	88	55.536	ENSAMEG00000005150	WDR43	81	55.536	Ailuropoda_melanoleuca
ENSXCOG00000011240	wdr43	99	82.853	ENSACIG00000010675	wdr43	92	82.532	Amphilophus_citrinellus
ENSXCOG00000011240	wdr43	91	86.865	ENSAOCG00000006818	wdr43	90	87.434	Amphiprion_ocellaris
ENSXCOG00000011240	wdr43	99	79.784	ENSAPEG00000000552	wdr43	99	80.247	Amphiprion_percula
ENSXCOG00000011240	wdr43	91	86.515	ENSATEG00000010805	wdr43	86	87.080	Anabas_testudineus
ENSXCOG00000011240	wdr43	89	53.726	ENSAPLG00000014314	WDR43	86	57.310	Anas_platyrhynchos
ENSXCOG00000011240	wdr43	91	56.684	ENSACAG00000009264	WDR43	83	57.094	Anolis_carolinensis
ENSXCOG00000011240	wdr43	88	56.239	ENSANAG00000035736	WDR43	83	56.239	Aotus_nancymaae
ENSXCOG00000011240	wdr43	99	81.776	ENSACLG00000025675	wdr43	87	87.611	Astatotilapia_calliptera
ENSXCOG00000011240	wdr43	100	65.782	ENSAMXG00000018623	wdr43	86	72.586	Astyanax_mexicanus
ENSXCOG00000011240	wdr43	88	56.591	ENSBTAG00000018196	WDR43	83	56.591	Bos_taurus
ENSXCOG00000011240	wdr43	98	50.749	ENSCJAG00000008946	WDR43	83	56.063	Callithrix_jacchus
ENSXCOG00000011240	wdr43	88	55.360	ENSCAFG00000005253	WDR43	83	55.360	Canis_familiaris
ENSXCOG00000011240	wdr43	88	55.360	ENSCAFG00020024035	WDR43	77	55.360	Canis_lupus_dingo
ENSXCOG00000011240	wdr43	98	51.868	ENSCHIG00000006001	WDR43	83	56.942	Capra_hircus
ENSXCOG00000011240	wdr43	79	56.667	ENSTSYG00000006448	WDR43	83	57.059	Carlito_syrichta
ENSXCOG00000011240	wdr43	78	46.185	ENSCAPG00000014276	WDR43	99	39.367	Cavia_aperea
ENSXCOG00000011240	wdr43	98	50.599	ENSCCAG00000028533	WDR43	83	55.888	Cebus_capucinus
ENSXCOG00000011240	wdr43	98	51.048	ENSCATG00000031005	WDR43	83	55.888	Cercocebus_atys
ENSXCOG00000011240	wdr43	88	56.316	ENSCLAG00000011898	WDR43	83	56.316	Chinchilla_lanigera
ENSXCOG00000011240	wdr43	72	48.111	ENSCSAG00000010665	WDR43	80	54.208	Chlorocebus_sabaeus
ENSXCOG00000011240	wdr43	89	55.672	ENSCHOG00000013830	WDR43	81	55.888	Choloepus_hoffmanni
ENSXCOG00000011240	wdr43	98	52.167	ENSCPBG00000000374	WDR43	84	57.143	Chrysemys_picta_bellii
ENSXCOG00000011240	wdr43	98	48.649	ENSCANG00000033059	WDR43	83	53.076	Colobus_angolensis_palliatus
ENSXCOG00000011240	wdr43	90	54.844	ENSCGRG00001023204	Wdr43	83	55.536	Cricetulus_griseus_chok1gshd
ENSXCOG00000011240	wdr43	81	54.231	ENSCGRG00000005070	Wdr43	83	54.883	Cricetulus_griseus_crigri
ENSXCOG00000011240	wdr43	99	75.039	ENSCSEG00000016372	wdr43	95	81.770	Cynoglossus_semilaevis
ENSXCOG00000011240	wdr43	99	69.839	ENSCVAG00000016604	wdr43	98	69.355	Cyprinodon_variegatus
ENSXCOG00000011240	wdr43	100	67.584	ENSDARG00000077264	wdr43	86	72.968	Danio_rerio
ENSXCOG00000011240	wdr43	88	56.239	ENSDNOG00000018841	WDR43	83	56.239	Dasypus_novemcinctus
ENSXCOG00000011240	wdr43	91	52.659	ENSDORG00000000255	Wdr43	83	53.310	Dipodomys_ordii
ENSXCOG00000011240	wdr43	71	63.636	ENSETEG00000004853	WDR43	54	63.636	Echinops_telfairi
ENSXCOG00000011240	wdr43	91	43.515	ENSEBUG00000016586	wdr43	87	42.085	Eptatretus_burgeri
ENSXCOG00000011240	wdr43	88	56.239	ENSEASG00005009046	WDR43	83	56.239	Equus_asinus_asinus
ENSXCOG00000011240	wdr43	88	51.499	ENSECAG00000023777	WDR43	81	51.675	Equus_caballus
ENSXCOG00000011240	wdr43	74	61.818	ENSEEUG00000006044	WDR43	66	61.818	Erinaceus_europaeus
ENSXCOG00000011240	wdr43	100	72.853	ENSELUG00000019806	wdr43	83	79.469	Esox_lucius
ENSXCOG00000011240	wdr43	98	51.703	ENSFCAG00000018872	WDR43	86	54.816	Felis_catus
ENSXCOG00000011240	wdr43	89	53.322	ENSFALG00000011213	WDR43	99	52.048	Ficedula_albicollis
ENSXCOG00000011240	wdr43	88	55.439	ENSFDAG00000007446	WDR43	83	55.439	Fukomys_damarensis
ENSXCOG00000011240	wdr43	99	83.981	ENSFHEG00000021863	wdr43	99	84.914	Fundulus_heteroclitus
ENSXCOG00000011240	wdr43	97	74.404	ENSGMOG00000001695	wdr43	87	80.505	Gadus_morhua
ENSXCOG00000011240	wdr43	98	51.442	ENSGALG00000032529	WDR43	98	52.366	Gallus_gallus
ENSXCOG00000011240	wdr43	99	92.044	ENSGAFG00000019525	wdr43	99	91.576	Gambusia_affinis
ENSXCOG00000011240	wdr43	98	77.603	ENSGACG00000012843	wdr43	88	83.574	Gasterosteus_aculeatus
ENSXCOG00000011240	wdr43	98	50.601	ENSGGOG00000015956	WDR43	83	55.536	Gorilla_gorilla
ENSXCOG00000011240	wdr43	99	82.087	ENSHBUG00000011585	wdr43	83	87.788	Haplochromis_burtoni
ENSXCOG00000011240	wdr43	88	55.614	ENSHGLG00000006912	WDR43	83	55.614	Heterocephalus_glaber_female
ENSXCOG00000011240	wdr43	88	55.614	ENSHGLG00100007455	WDR43	83	55.614	Heterocephalus_glaber_male
ENSXCOG00000011240	wdr43	100	77.523	ENSHCOG00000001160	wdr43	86	83.392	Hippocampus_comes
ENSXCOG00000011240	wdr43	99	65.022	ENSIPUG00000015564	wdr43	86	72.444	Ictalurus_punctatus
ENSXCOG00000011240	wdr43	88	55.634	ENSSTOG00000014687	WDR43	83	55.634	Ictidomys_tridecemlineatus
ENSXCOG00000011240	wdr43	89	53.590	ENSJJAG00000016353	-	91	50.825	Jaculus_jaculus
ENSXCOG00000011240	wdr43	80	53.965	ENSJJAG00000012314	-	81	53.965	Jaculus_jaculus
ENSXCOG00000011240	wdr43	99	81.337	ENSKMAG00000009301	wdr43	99	81.337	Kryptolebias_marmoratus
ENSXCOG00000011240	wdr43	100	79.331	ENSLBEG00000022773	wdr43	86	86.903	Labrus_bergylta
ENSXCOG00000011240	wdr43	98	51.946	ENSLACG00000012425	WDR43	84	56.993	Latimeria_chalumnae
ENSXCOG00000011240	wdr43	88	55.360	ENSLAFG00000005457	WDR43	91	55.360	Loxodonta_africana
ENSXCOG00000011240	wdr43	98	50.898	ENSMFAG00000031243	WDR43	83	55.712	Macaca_fascicularis
ENSXCOG00000011240	wdr43	98	50.898	ENSMMUG00000022268	WDR43	83	55.712	Macaca_mulatta
ENSXCOG00000011240	wdr43	98	51.048	ENSMNEG00000035036	WDR43	89	55.888	Macaca_nemestrina
ENSXCOG00000011240	wdr43	89	49.836	ENSMLEG00000022852	WDR43	74	54.883	Mandrillus_leucophaeus
ENSXCOG00000011240	wdr43	99	80.515	ENSMAMG00000014056	wdr43	99	80.998	Mastacembelus_armatus
ENSXCOG00000011240	wdr43	99	81.620	ENSMZEG00005009095	wdr43	87	87.434	Maylandia_zebra
ENSXCOG00000011240	wdr43	88	51.613	ENSMGAG00000005248	WDR43	99	52.551	Meleagris_gallopavo
ENSXCOG00000011240	wdr43	90	50.856	ENSMAUG00000007339	Wdr43	83	51.478	Mesocricetus_auratus
ENSXCOG00000011240	wdr43	90	55.517	ENSMICG00000014276	WDR43	83	56.415	Microcebus_murinus
ENSXCOG00000011240	wdr43	98	51.124	ENSMOCG00000017279	Wdr43	83	55.888	Microtus_ochrogaster
ENSXCOG00000011240	wdr43	100	80.811	ENSMMOG00000004782	wdr43	96	80.063	Mola_mola
ENSXCOG00000011240	wdr43	88	54.306	ENSMODG00000015545	WDR43	83	54.482	Monodelphis_domestica
ENSXCOG00000011240	wdr43	68	72.687	ENSMALG00000007866	wdr43	81	80.965	Monopterus_albus
ENSXCOG00000011240	wdr43	98	51.271	MGP_CAROLIEiJ_G0021861	Wdr43	83	56.063	Mus_caroli
ENSXCOG00000011240	wdr43	98	51.121	ENSMUSG00000041057	Wdr43	83	55.888	Mus_musculus
ENSXCOG00000011240	wdr43	88	56.063	MGP_PahariEiJ_G0020848	Wdr43	83	56.063	Mus_pahari
ENSXCOG00000011240	wdr43	98	50.972	MGP_SPRETEiJ_G0022772	Wdr43	83	55.712	Mus_spretus
ENSXCOG00000011240	wdr43	88	56.415	ENSMPUG00000017985	WDR43	83	56.415	Mustela_putorius_furo
ENSXCOG00000011240	wdr43	99	48.817	ENSMLUG00000010666	WDR43	83	54.116	Myotis_lucifugus
ENSXCOG00000011240	wdr43	90	54.922	ENSNGAG00000004446	Wdr43	83	55.614	Nannospalax_galili
ENSXCOG00000011240	wdr43	99	82.243	ENSNBRG00000011062	wdr43	87	87.965	Neolamprologus_brichardi
ENSXCOG00000011240	wdr43	99	50.969	ENSNLEG00000015361	WDR43	83	55.769	Nomascus_leucogenys
ENSXCOG00000011240	wdr43	79	45.401	ENSOPRG00000007219	WDR43	84	45.988	Ochotona_princeps
ENSXCOG00000011240	wdr43	88	55.789	ENSODEG00000006870	WDR43	83	55.789	Octodon_degus
ENSXCOG00000011240	wdr43	99	81.734	ENSONIG00000019540	wdr43	86	87.788	Oreochromis_niloticus
ENSXCOG00000011240	wdr43	89	51.926	ENSOANG00000014467	WDR43	86	56.008	Ornithorhynchus_anatinus
ENSXCOG00000011240	wdr43	88	56.491	ENSOCUG00000003126	WDR43	82	56.842	Oryctolagus_cuniculus
ENSXCOG00000011240	wdr43	99	77.019	ENSORLG00000018236	wdr43	99	76.827	Oryzias_latipes
ENSXCOG00000011240	wdr43	99	77.605	ENSORLG00020008182	wdr43	99	77.294	Oryzias_latipes_hni
ENSXCOG00000011240	wdr43	99	79.871	ENSORLG00015005256	wdr43	99	79.871	Oryzias_latipes_hsok
ENSXCOG00000011240	wdr43	99	76.625	ENSOMEG00000009928	wdr43	90	77.054	Oryzias_melastigma
ENSXCOG00000011240	wdr43	88	56.316	ENSOGAG00000009879	WDR43	80	56.316	Otolemur_garnettii
ENSXCOG00000011240	wdr43	62	55.446	ENSOARG00000019566	WDR43	80	55.446	Ovis_aries
ENSXCOG00000011240	wdr43	79	55.098	ENSPPAG00000041978	WDR43	84	55.098	Pan_paniscus
ENSXCOG00000011240	wdr43	98	53.438	ENSPPRG00000001900	WDR43	87	55.536	Panthera_pardus
ENSXCOG00000011240	wdr43	98	50.520	ENSPTIG00000005982	WDR43	83	54.816	Panthera_tigris_altaica
ENSXCOG00000011240	wdr43	88	55.888	ENSPTRG00000011792	WDR43	83	55.888	Pan_troglodytes
ENSXCOG00000011240	wdr43	98	50.898	ENSPANG00000018846	WDR43	88	55.712	Papio_anubis
ENSXCOG00000011240	wdr43	100	65.809	ENSPKIG00000022935	wdr43	86	71.629	Paramormyrops_kingsleyae
ENSXCOG00000011240	wdr43	72	48.907	ENSPSIG00000014217	WDR43	80	54.926	Pelodiscus_sinensis
ENSXCOG00000011240	wdr43	100	75.077	ENSPMGG00000001169	wdr43	88	81.272	Periophthalmus_magnuspinnatus
ENSXCOG00000011240	wdr43	98	50.297	ENSPEMG00000021715	Wdr43	83	55.185	Peromyscus_maniculatus_bairdii
ENSXCOG00000011240	wdr43	88	49.650	ENSPMAG00000006054	wdr43	94	49.650	Petromyzon_marinus
ENSXCOG00000011240	wdr43	88	54.130	ENSPCIG00000011948	WDR43	90	54.130	Phascolarctos_cinereus
ENSXCOG00000011240	wdr43	99	91.576	ENSPFOG00000011371	wdr43	99	91.108	Poecilia_formosa
ENSXCOG00000011240	wdr43	99	91.576	ENSPLAG00000002041	wdr43	99	91.108	Poecilia_latipinna
ENSXCOG00000011240	wdr43	99	91.576	ENSPMEG00000020902	wdr43	93	97.168	Poecilia_mexicana
ENSXCOG00000011240	wdr43	99	89.252	ENSPREG00000004959	wdr43	99	90.498	Poecilia_reticulata
ENSXCOG00000011240	wdr43	98	51.048	ENSPPYG00000012526	WDR43	78	55.888	Pongo_abelii
ENSXCOG00000011240	wdr43	89	52.715	ENSPCAG00000011610	WDR43	80	52.715	Procavia_capensis
ENSXCOG00000011240	wdr43	88	56.239	ENSPCOG00000000476	WDR43	83	56.239	Propithecus_coquereli
ENSXCOG00000011240	wdr43	88	50.967	ENSPVAG00000013850	WDR43	78	50.967	Pteropus_vampyrus
ENSXCOG00000011240	wdr43	99	81.931	ENSPNYG00000023080	wdr43	87	87.788	Pundamilia_nyererei
ENSXCOG00000011240	wdr43	89	73.050	ENSPNAG00000023664	wdr43	84	73.050	Pygocentrus_nattereri
ENSXCOG00000011240	wdr43	98	51.424	ENSRNOG00000026316	Wdr43	83	56.063	Rattus_norvegicus
ENSXCOG00000011240	wdr43	98	52.550	ENSRBIG00000026670	WDR43	86	55.712	Rhinopithecus_bieti
ENSXCOG00000011240	wdr43	98	51.048	ENSRROG00000035929	WDR43	83	55.888	Rhinopithecus_roxellana
ENSXCOG00000011240	wdr43	98	51.198	ENSSBOG00000021596	WDR43	83	56.591	Saimiri_boliviensis_boliviensis
ENSXCOG00000011240	wdr43	94	51.724	ENSSHAG00000009672	WDR43	94	51.111	Sarcophilus_harrisii
ENSXCOG00000011240	wdr43	100	66.009	ENSSFOG00015007173	wdr43	78	72.680	Scleropages_formosus
ENSXCOG00000011240	wdr43	100	52.366	ENSSFOG00015004013	-	90	54.799	Scleropages_formosus
ENSXCOG00000011240	wdr43	97	78.754	ENSSMAG00000015328	wdr43	86	85.018	Scophthalmus_maximus
ENSXCOG00000011240	wdr43	99	82.880	ENSSDUG00000018532	wdr43	99	82.504	Seriola_dumerili
ENSXCOG00000011240	wdr43	91	86.165	ENSSLDG00000015626	wdr43	91	86.726	Seriola_lalandi_dorsalis
ENSXCOG00000011240	wdr43	71	59.657	ENSSARG00000013358	WDR43	72	59.657	Sorex_araneus
ENSXCOG00000011240	wdr43	99	51.194	ENSSPUG00000006260	WDR43	95	51.698	Sphenodon_punctatus
ENSXCOG00000011240	wdr43	90	86.726	ENSSPAG00000002830	wdr43	88	86.726	Stegastes_partitus
ENSXCOG00000011240	wdr43	88	55.536	ENSSSCG00000008536	WDR43	83	55.536	Sus_scrofa
ENSXCOG00000011240	wdr43	88	55.944	ENSTGUG00000005464	WDR43	87	55.944	Taeniopygia_guttata
ENSXCOG00000011240	wdr43	90	80.776	ENSTRUG00000009764	wdr43	88	80.776	Takifugu_rubripes
ENSXCOG00000011240	wdr43	99	74.961	ENSTNIG00000008907	wdr43	94	76.613	Tetraodon_nigroviridis
ENSXCOG00000011240	wdr43	79	55.403	ENSTBEG00000007577	WDR43	96	55.403	Tupaia_belangeri
ENSXCOG00000011240	wdr43	79	55.490	ENSTTRG00000008268	WDR43	70	55.490	Tursiops_truncatus
ENSXCOG00000011240	wdr43	88	55.536	ENSUAMG00000015504	WDR43	83	55.536	Ursus_americanus
ENSXCOG00000011240	wdr43	88	55.536	ENSUMAG00000020071	WDR43	83	55.536	Ursus_maritimus
ENSXCOG00000011240	wdr43	62	51.802	ENSVPAG00000001632	WDR43	54	51.802	Vicugna_pacos
ENSXCOG00000011240	wdr43	88	55.536	ENSVVUG00000002890	WDR43	90	55.536	Vulpes_vulpes
ENSXCOG00000011240	wdr43	100	99.681	ENSXMAG00000018379	wdr43	100	99.681	Xiphophorus_maculatus