EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000011423 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 427 bases
Position: chrKQ557201.1:19213981-19214407
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000015071	SM-ATX	PF14438.6	1e-07	1	1
ENSXCOP00000015071	LSM14	PF12701.7	6.9e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000015260	-	276	-	ENSXCOP00000015071	91 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000011423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000011423	-	89	64.198	ENSXCOG00000017365	-	82	64.198

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000011423	-	95	73.256	ENSAPOG00000009997	-	80	73.256	Acanthochromis_polyacanthus
ENSXCOG00000011423	-	95	82.558	ENSACIG00000003134	-	70	82.558	Amphilophus_citrinellus
ENSXCOG00000011423	-	95	77.907	ENSAPEG00000013779	-	85	77.907	Amphiprion_percula
ENSXCOG00000011423	-	98	85.393	ENSATEG00000015882	-	100	85.393	Anabas_testudineus
ENSXCOG00000011423	-	95	60.465	ENSCVAG00000005570	-	89	60.465	Cyprinodon_variegatus
ENSXCOG00000011423	-	95	89.535	ENSCVAG00000012411	-	89	89.535	Cyprinodon_variegatus
ENSXCOG00000011423	-	95	98.837	ENSGAFG00000013718	-	89	98.837	Gambusia_affinis
ENSXCOG00000011423	-	92	83.333	ENSHBUG00000012323	-	80	83.333	Haplochromis_burtoni
ENSXCOG00000011423	-	93	62.353	ENSHBUG00000011864	-	64	62.353	Haplochromis_burtoni
ENSXCOG00000011423	-	89	59.259	ENSHCOG00000004862	-	74	59.259	Hippocampus_comes
ENSXCOG00000011423	-	96	87.356	ENSKMAG00000016674	-	79	87.356	Kryptolebias_marmoratus
ENSXCOG00000011423	-	96	88.506	ENSKMAG00000012850	-	91	88.506	Kryptolebias_marmoratus
ENSXCOG00000011423	-	95	82.558	ENSLBEG00000007971	-	83	82.558	Labrus_bergylta
ENSXCOG00000011423	-	95	62.791	ENSLBEG00000016427	lsm14b	60	62.791	Labrus_bergylta
ENSXCOG00000011423	-	92	66.667	ENSNGAG00000016305	-	67	66.667	Nannospalax_galili
ENSXCOG00000011423	-	93	62.353	ENSNBRG00000022606	-	64	62.353	Neolamprologus_brichardi
ENSXCOG00000011423	-	92	82.143	ENSNBRG00000022370	-	80	82.143	Neolamprologus_brichardi
ENSXCOG00000011423	-	93	84.706	ENSORLG00020018184	-	86	84.706	Oryzias_latipes_hni
ENSXCOG00000011423	-	87	82.278	ENSOMEG00000007241	-	95	82.278	Oryzias_melastigma
ENSXCOG00000011423	-	95	70.930	ENSPKIG00000003275	lsm14b	80	70.930	Paramormyrops_kingsleyae
ENSXCOG00000011423	-	95	62.791	ENSPMGG00000014569	lsm14b	54	62.791	Periophthalmus_magnuspinnatus
ENSXCOG00000011423	-	89	75.309	ENSPMGG00000004595	-	82	75.309	Periophthalmus_magnuspinnatus
ENSXCOG00000011423	-	100	89.011	ENSPREG00000007817	-	100	89.011	Poecilia_reticulata
ENSXCOG00000011423	-	95	62.791	ENSPREG00000016484	-	56	62.791	Poecilia_reticulata
ENSXCOG00000011423	-	92	83.333	ENSPNYG00000021706	-	79	83.333	Pundamilia_nyererei
ENSXCOG00000011423	-	93	62.353	ENSPNYG00000019601	-	64	62.353	Pundamilia_nyererei
ENSXCOG00000011423	-	98	83.696	ENSSLDG00000012686	-	100	83.696	Seriola_lalandi_dorsalis
ENSXCOG00000011423	-	98	83.696	ENSSLDG00000011341	-	100	83.696	Seriola_lalandi_dorsalis
ENSXCOG00000011423	-	98	61.798	ENSSLDG00000011706	-	97	61.798	Seriola_lalandi_dorsalis
ENSXCOG00000011423	-	95	79.070	ENSSPAG00000018837	-	85	79.070	Stegastes_partitus
ENSXCOG00000011423	-	100	98.901	ENSXMAG00000015481	-	100	98.901	Xiphophorus_maculatus