EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000011427 (Gene tree)
Gene ID
-
Gene Symbol
u2surp
Alias
mp:zf637-1-000918|si:dkey-181m9.9|wu:fa03e02|wu:fb38b01|wu:fc75d03
Full Name
U2 snRNP-associated SURP domain containing
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
12683 bases
Position
chrKQ557214.1:13223137-13235819
Accession
ZDB-GENE-070912-400
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000015079cwf21PF08312.121.1e-1111
ENSXCOP00000015079RRM_1PF00076.222e-1511
ENSXCOP00000015079SurpPF01805.201.3e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000015268-2670-ENSXCOP00000015079889 (aa)--
Gene Model
Click here to download ENSXCOG00000011427's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011427's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000011427u2surp7551.613ENSXCOG00000007025zgc:1630989153.333
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000011427u2surp9176.087ENSG00000163714U2SURP8277.322Homo_sapiens
ENSXCOG00000011427u2surp9252.018ENSAPOG00000005569zgc:1630989452.552Acanthochromis_polyacanthus
ENSXCOG00000011427u2surp9291.383ENSAPOG00000011345u2surp8491.435Acanthochromis_polyacanthus
ENSXCOG00000011427u2surp9176.087ENSAMEG00000012757U2SURP7976.024Ailuropoda_melanoleuca
ENSXCOG00000011427u2surp9290.954ENSACIG00000018537u2surp8890.887Amphilophus_citrinellus
ENSXCOG00000011427u2surp9344.342ENSACIG00000011968zgc:1630988746.863Amphilophus_citrinellus
ENSXCOG00000011427u2surp9251.728ENSAOCG00000008482zgc:1630989552.129Amphiprion_ocellaris
ENSXCOG00000011427u2surp9291.262ENSAOCG00000003589u2surp9684.014Amphiprion_ocellaris
ENSXCOG00000011427u2surp9251.728ENSAPEG00000001348zgc:1630989552.129Amphiprion_percula
ENSXCOG00000011427u2surp9291.141ENSAPEG00000016652u2surp8291.194Amphiprion_percula
ENSXCOG00000011427u2surp9251.408ENSATEG00000016576zgc:1630989153.260Anabas_testudineus
ENSXCOG00000011427u2surp9176.456ENSAPLG00000002348U2SURP8576.242Anas_platyrhynchos
ENSXCOG00000011427u2surp9274.681ENSACAG00000009512U2SURP8174.100Anolis_carolinensis
ENSXCOG00000011427u2surp9275.656ENSANAG00000035774U2SURP8775.995Aotus_nancymaae
ENSXCOG00000011427u2surp9288.889ENSACLG00000027507u2surp8488.902Astatotilapia_calliptera
ENSXCOG00000011427u2surp9451.821ENSACLG00000016647zgc:1630988953.423Astatotilapia_calliptera
ENSXCOG00000011427u2surp9451.061ENSAMXG00000005081zgc:1630989650.288Astyanax_mexicanus
ENSXCOG00000011427u2surp9279.645ENSAMXG00000006189u2surp8979.882Astyanax_mexicanus
ENSXCOG00000011427u2surp7832.988WBGene00015581C07H6.48033.333Caenorhabditis_elegans
ENSXCOG00000011427u2surp9873.673ENSCJAG00000001639U2SURP8475.754Callithrix_jacchus
ENSXCOG00000011427u2surp9176.208ENSCAFG00000007973U2SURP7975.754Canis_familiaris
ENSXCOG00000011427u2surp9873.451ENSCAFG00020010497U2SURP9471.739Canis_lupus_dingo
ENSXCOG00000011427u2surp9176.300ENSCHIG00000023892U2SURP8075.845Capra_hircus
ENSXCOG00000011427u2surp9176.087ENSTSYG00000008889U2SURP8276.271Carlito_syrichta
ENSXCOG00000011427u2surp7576.106ENSCAPG00000016009U2SURP8175.258Cavia_aperea
ENSXCOG00000011427u2surp7578.446ENSCPOG00000011656U2SURP8478.116Cavia_porcellus
ENSXCOG00000011427u2surp9869.239ENSCCAG00000032530U2SURP9171.035Cebus_capucinus
ENSXCOG00000011427u2surp9176.208ENSCATG00000039024U2SURP8475.718Cercocebus_atys
ENSXCOG00000011427u2surp9176.087ENSCLAG00000001331-8574.942Chinchilla_lanigera
ENSXCOG00000011427u2surp8261.200ENSCLAG00000011055-8161.487Chinchilla_lanigera
ENSXCOG00000011427u2surp9175.508ENSCSAG00000011321U2SURP7975.725Chlorocebus_sabaeus
ENSXCOG00000011427u2surp6780.662ENSCHOG00000001300U2SURP5879.644Choloepus_hoffmanni
ENSXCOG00000011427u2surp9873.400ENSCPBG00000008969U2SURP8975.779Chrysemys_picta_bellii
ENSXCOG00000011427u2surp9851.002ENSCING00000018030-9152.432Ciona_intestinalis
ENSXCOG00000011427u2surp9251.114ENSCSAVG00000009039-10050.246Ciona_savignyi
ENSXCOG00000011427u2surp9176.364ENSCANG00000032307U2SURP8475.598Colobus_angolensis_palliatus
ENSXCOG00000011427u2surp9175.388ENSCGRG00001019402U2surp8574.825Cricetulus_griseus_chok1gshd
ENSXCOG00000011427u2surp9749.432ENSCSEG00000020119zgc:1630989750.056Cynoglossus_semilaevis
ENSXCOG00000011427u2surp9287.696ENSCSEG00000015150u2surp8988.072Cynoglossus_semilaevis
ENSXCOG00000011427u2surp9351.389ENSCVAG00000012334zgc:1630988953.667Cyprinodon_variegatus
ENSXCOG00000011427u2surp9295.134ENSCVAG00000002961u2surp8594.800Cyprinodon_variegatus
ENSXCOG00000011427u2surp9754.333ENSDARG00000078911zgc:1630989456.693Danio_rerio
ENSXCOG00000011427u2surp9281.862ENSDARG00000061490u2surp9982.034Danio_rerio
ENSXCOG00000011427u2surp9175.754ENSDNOG00000006427U2SURP7975.812Dasypus_novemcinctus
ENSXCOG00000011427u2surp9245.455FBgn0034572CG93468545.974Drosophila_melanogaster
ENSXCOG00000011427u2surp7673.469ENSETEG00000000149U2SURP6972.653Echinops_telfairi
ENSXCOG00000011427u2surp6256.866ENSEBUG00000003543u2surp7556.571Eptatretus_burgeri
ENSXCOG00000011427u2surp9873.451ENSEASG00005000213U2SURP8476.024Equus_asinus_asinus
ENSXCOG00000011427u2surp9873.451ENSECAG00000022460U2SURP8476.024Equus_caballus
ENSXCOG00000011427u2surp8171.978ENSEEUG00000013553U2SURP7071.196Erinaceus_europaeus
ENSXCOG00000011427u2surp9282.030ENSELUG00000002150u2surp8483.179Esox_lucius
ENSXCOG00000011427u2surp9654.842ENSELUG00000017966zgc:1630988657.036Esox_lucius
ENSXCOG00000011427u2surp9175.508ENSFCAG00000012186U2SURP7975.754Felis_catus
ENSXCOG00000011427u2surp9274.279ENSFALG00000007070U2SURP8674.078Ficedula_albicollis
ENSXCOG00000011427u2surp9176.087ENSFDAG00000013365U2SURP8574.942Fukomys_damarensis
ENSXCOG00000011427u2surp9349.886ENSFHEG00000014263zgc:1630988854.140Fundulus_heteroclitus
ENSXCOG00000011427u2surp9294.296ENSFHEG00000016966u2surp8594.089Fundulus_heteroclitus
ENSXCOG00000011427u2surp7955.533ENSGMOG00000000935zgc:1630989455.785Gadus_morhua
ENSXCOG00000011427u2surp9281.948ENSGMOG00000002641u2surp8781.948Gadus_morhua
ENSXCOG00000011427u2surp9176.456ENSGALG00000002612U2SURP7776.242Gallus_gallus
ENSXCOG00000011427u2surp9397.585ENSGAFG00000004001u2surp9297.585Gambusia_affinis
ENSXCOG00000011427u2surp9979.666ENSGACG00000003763u2surp8886.916Gasterosteus_aculeatus
ENSXCOG00000011427u2surp8949.460ENSGACG00000020709zgc:1630988650.299Gasterosteus_aculeatus
ENSXCOG00000011427u2surp8976.290ENSGAGG00000010747U2SURP8575.706Gopherus_agassizii
ENSXCOG00000011427u2surp9176.087ENSGGOG00000005563U2SURP8572.503Gorilla_gorilla
ENSXCOG00000011427u2surp9451.663ENSHBUG00000022716zgc:1630989253.667Haplochromis_burtoni
ENSXCOG00000011427u2surp8091.667ENSHBUG00000015530u2surp8591.048Haplochromis_burtoni
ENSXCOG00000011427u2surp9176.087ENSHGLG00000017227-8574.942Heterocephalus_glaber_female
ENSXCOG00000011427u2surp8761.662ENSHGLG00000018851-7672.727Heterocephalus_glaber_female
ENSXCOG00000011427u2surp8372.727ENSHGLG00100001176-7672.727Heterocephalus_glaber_male
ENSXCOG00000011427u2surp8661.662ENSHGLG00100001134-7576.190Heterocephalus_glaber_male
ENSXCOG00000011427u2surp9176.087ENSHGLG00100005796-8574.942Heterocephalus_glaber_male
ENSXCOG00000011427u2surp9485.142ENSHCOG00000011508u2surp8484.652Hippocampus_comes
ENSXCOG00000011427u2surp9278.546ENSIPUG00000007822u2surp8578.308Ictalurus_punctatus
ENSXCOG00000011427u2surp9350.342ENSIPUG00000019652zgc:1630989753.784Ictalurus_punctatus
ENSXCOG00000011427u2surp9176.329ENSSTOG00000015997U2SURP7975.845Ictidomys_tridecemlineatus
ENSXCOG00000011427u2surp9275.234ENSJJAG00000021595U2surp8575.146Jaculus_jaculus
ENSXCOG00000011427u2surp9292.345ENSKMAG00000012083u2surp8991.829Kryptolebias_marmoratus
ENSXCOG00000011427u2surp9649.665ENSKMAG00000009727zgc:1630989348.727Kryptolebias_marmoratus
ENSXCOG00000011427u2surp9785.152ENSLBEG00000026284u2surp9388.513Labrus_bergylta
ENSXCOG00000011427u2surp8252.540ENSLBEG00000002498zgc:1630988854.545Labrus_bergylta
ENSXCOG00000011427u2surp9061.779ENSLACG00000008434zgc:1630988562.350Latimeria_chalumnae
ENSXCOG00000011427u2surp8975.432ENSLACG00000012318U2SURP8575.339Latimeria_chalumnae
ENSXCOG00000011427u2surp8753.752ENSLOCG00000013596zgc:1630988259.971Lepisosteus_oculatus
ENSXCOG00000011427u2surp9282.283ENSLOCG00000007828u2surp8582.185Lepisosteus_oculatus
ENSXCOG00000011427u2surp9275.598ENSLAFG00000002566U2SURP8075.598Loxodonta_africana
ENSXCOG00000011427u2surp9275.089ENSMFAG00000031084U2SURP8575.718Macaca_fascicularis
ENSXCOG00000011427u2surp9176.087ENSMMUG00000002775U2SURP8376.271Macaca_mulatta
ENSXCOG00000011427u2surp9275.089ENSMNEG00000034553U2SURP8575.718Macaca_nemestrina
ENSXCOG00000011427u2surp9275.089ENSMLEG00000021031U2SURP8575.718Mandrillus_leucophaeus
ENSXCOG00000011427u2surp9288.620ENSMAMG00000003004u2surp8588.207Mastacembelus_armatus
ENSXCOG00000011427u2surp9351.784ENSMAMG00000016977zgc:1630988853.990Mastacembelus_armatus
ENSXCOG00000011427u2surp9288.902ENSMZEG00005021991u2surp8688.675Maylandia_zebra
ENSXCOG00000011427u2surp9451.821ENSMZEG00005016805zgc:1630988953.423Maylandia_zebra
ENSXCOG00000011427u2surp9176.456ENSMGAG00000006549U2SURP8576.242Meleagris_gallopavo
ENSXCOG00000011427u2surp9176.208ENSMICG00000049294U2SURP7976.024Microcebus_murinus
ENSXCOG00000011427u2surp9175.966ENSMOCG00000000631U2surp8574.825Microtus_ochrogaster
ENSXCOG00000011427u2surp9286.603ENSMMOG00000004474u2surp8885.060Mola_mola
ENSXCOG00000011427u2surp9445.595ENSMMOG00000016677zgc:1630988647.512Mola_mola
ENSXCOG00000011427u2surp9966.228ENSMODG00000010847-8569.366Monodelphis_domestica
ENSXCOG00000011427u2surp9174.232ENSMODG00000021242-7873.286Monodelphis_domestica
ENSXCOG00000011427u2surp9452.826ENSMALG00000015881zgc:1630989553.317Monopterus_albus
ENSXCOG00000011427u2surp9289.988ENSMALG00000007458u2surp9389.988Monopterus_albus
ENSXCOG00000011427u2surp9079.610MGP_CAROLIEiJ_G0032530-8076.437Mus_caroli
ENSXCOG00000011427u2surp9176.087ENSMUSG00000032407U2surp8574.709Mus_musculus
ENSXCOG00000011427u2surp9176.087MGP_PahariEiJ_G0015398U2surp8574.825Mus_pahari
ENSXCOG00000011427u2surp9176.087MGP_SPRETEiJ_G0033672U2surp8574.825Mus_spretus
ENSXCOG00000011427u2surp9176.087ENSMPUG00000011855U2SURP7976.024Mustela_putorius_furo
ENSXCOG00000011427u2surp9174.248ENSMLUG00000014633-7974.034Myotis_lucifugus
ENSXCOG00000011427u2surp9175.659ENSMLUG00000002920-8075.870Myotis_lucifugus
ENSXCOG00000011427u2surp9175.966ENSNGAG00000013707U2surp8574.825Nannospalax_galili
ENSXCOG00000011427u2surp9278.382ENSNBRG00000017162u2surp9788.674Neolamprologus_brichardi
ENSXCOG00000011427u2surp9176.208ENSNLEG00000004915U2SURP8475.718Nomascus_leucogenys
ENSXCOG00000011427u2surp7976.316ENSMEUG00000000127U2SURP7076.316Notamacropus_eugenii
ENSXCOG00000011427u2surp8496.552ENSOPRG00000011328U2SURP7793.333Ochotona_princeps
ENSXCOG00000011427u2surp9175.966ENSODEG00000008767U2SURP8574.825Octodon_degus
ENSXCOG00000011427u2surp9290.516ENSONIG00000005909u2surp8590.288Oreochromis_niloticus
ENSXCOG00000011427u2surp9351.484ENSONIG00000005263zgc:1630988954.657Oreochromis_niloticus
ENSXCOG00000011427u2surp9772.707ENSOANG00000003644U2SURP8273.721Ornithorhynchus_anatinus
ENSXCOG00000011427u2surp9176.087ENSOCUG00000012121U2SURP7976.024Oryctolagus_cuniculus
ENSXCOG00000011427u2surp9290.036ENSORLG00000010235u2surp8489.976Oryzias_latipes
ENSXCOG00000011427u2surp9252.476ENSORLG00000007141zgc:1630989054.342Oryzias_latipes
ENSXCOG00000011427u2surp9252.712ENSORLG00020005525zgc:1630989054.591Oryzias_latipes_hni
ENSXCOG00000011427u2surp9290.097ENSORLG00020011726u2surp9690.097Oryzias_latipes_hni
ENSXCOG00000011427u2surp9289.915ENSORLG00015011465u2surp8489.855Oryzias_latipes_hsok
ENSXCOG00000011427u2surp9252.420ENSORLG00015010776zgc:1630989054.286Oryzias_latipes_hsok
ENSXCOG00000011427u2surp9187.946ENSOMEG00000004962u2surp9882.888Oryzias_melastigma
ENSXCOG00000011427u2surp9252.214ENSOMEG00000002172zgc:1630989054.703Oryzias_melastigma
ENSXCOG00000011427u2surp9176.087ENSOGAG00000004335U2SURP7976.024Otolemur_garnettii
ENSXCOG00000011427u2surp9075.942ENSOARG00000005871U2SURP7975.239Ovis_aries
ENSXCOG00000011427u2surp9176.087ENSPPRG00000022258U2SURP7976.024Panthera_pardus
ENSXCOG00000011427u2surp9175.725ENSPTIG00000001167U2SURP7975.663Panthera_tigris_altaica
ENSXCOG00000011427u2surp9176.087ENSPTRG00000015489U2SURP8076.724Pan_troglodytes
ENSXCOG00000011427u2surp9176.208ENSPANG00000000710U2SURP8775.725Papio_anubis
ENSXCOG00000011427u2surp9279.067ENSPKIG00000021859u2surp8679.028Paramormyrops_kingsleyae
ENSXCOG00000011427u2surp9058.852ENSPKIG00000017920zgc:1630988758.759Paramormyrops_kingsleyae
ENSXCOG00000011427u2surp8975.985ENSPSIG00000016578U2SURP8475.892Pelodiscus_sinensis
ENSXCOG00000011427u2surp8749.872ENSPMGG00000008623zgc:1630989868.323Periophthalmus_magnuspinnatus
ENSXCOG00000011427u2surp9175.845ENSPEMG00000020825U2surp8574.709Peromyscus_maniculatus_bairdii
ENSXCOG00000011427u2surp9173.045ENSPCIG00000004246U2SURP8671.995Phascolarctos_cinereus
ENSXCOG00000011427u2surp9297.932ENSPFOG00000014489u2surp8597.944Poecilia_formosa
ENSXCOG00000011427u2surp9350.698ENSPFOG00000011956zgc:1630989451.291Poecilia_formosa
ENSXCOG00000011427u2surp9297.932ENSPLAG00000006816u2surp8597.944Poecilia_latipinna
ENSXCOG00000011427u2surp9350.698ENSPLAG00000008250zgc:1630989451.291Poecilia_latipinna
ENSXCOG00000011427u2surp9296.459ENSPMEG00000014599u2surp9196.459Poecilia_mexicana
ENSXCOG00000011427u2surp9350.698ENSPMEG00000017413zgc:1630989451.174Poecilia_mexicana
ENSXCOG00000011427u2surp9350.698ENSPREG00000023067zgc:1630989351.056Poecilia_reticulata
ENSXCOG00000011427u2surp9298.173ENSPREG00000009325u2surp9496.010Poecilia_reticulata
ENSXCOG00000011427u2surp9175.937ENSPPYG00000014178U2SURP7975.513Pongo_abelii
ENSXCOG00000011427u2surp9172.738ENSPCAG00000015251U2SURP8072.738Procavia_capensis
ENSXCOG00000011427u2surp9172.033ENSPCOG00000019599U2SURP8372.203Propithecus_coquereli
ENSXCOG00000011427u2surp9171.377ENSPVAG00000016077U2SURP7971.325Pteropus_vampyrus
ENSXCOG00000011427u2surp9451.769ENSPNYG00000016481zgc:1630988953.545Pundamilia_nyererei
ENSXCOG00000011427u2surp9281.544ENSPNYG00000006246u2surp8681.665Pundamilia_nyererei
ENSXCOG00000011427u2surp9578.236ENSPNAG00000001722u2surp10078.236Pygocentrus_nattereri
ENSXCOG00000011427u2surp9351.628ENSPNAG00000023885zgc:1630988754.367Pygocentrus_nattereri
ENSXCOG00000011427u2surp9175.966ENSRNOG00000008607U2surp8574.825Rattus_norvegicus
ENSXCOG00000011427u2surp9173.835ENSRBIG00000041099U2SURP7974.458Rhinopithecus_bieti
ENSXCOG00000011427u2surp9275.659ENSRROG00000043548U2SURP8575.598Rhinopithecus_roxellana
ENSXCOG00000011427u2surp9176.087ENSSBOG00000027984U2SURP7976.024Saimiri_boliviensis_boliviensis
ENSXCOG00000011427u2surp9175.418ENSSHAG00000014407U2SURP7974.851Sarcophilus_harrisii
ENSXCOG00000011427u2surp8959.379ENSSFOG00015004962zgc:1630988463.184Scleropages_formosus
ENSXCOG00000011427u2surp9280.287ENSSFOG00015010470u2surp8479.527Scleropages_formosus
ENSXCOG00000011427u2surp9289.952ENSSMAG00000012475u2surp8490.132Scophthalmus_maximus
ENSXCOG00000011427u2surp9453.263ENSSMAG00000013442zgc:1630988754.819Scophthalmus_maximus
ENSXCOG00000011427u2surp9290.109ENSSDUG00000006136u2surp8887.455Seriola_dumerili
ENSXCOG00000011427u2surp9453.621ENSSDUG00000009881zgc:1630989650.512Seriola_dumerili
ENSXCOG00000011427u2surp9453.472ENSSLDG00000020364zgc:1630989555.615Seriola_lalandi_dorsalis
ENSXCOG00000011427u2surp9292.029ENSSLDG00000022385u2surp8592.039Seriola_lalandi_dorsalis
ENSXCOG00000011427u2surp7978.361ENSSARG00000013779U2SURP7178.887Sorex_araneus
ENSXCOG00000011427u2surp9076.543ENSSPUG00000013871U2SURP8675.666Sphenodon_punctatus
ENSXCOG00000011427u2surp9291.505ENSSPAG00000020432u2surp8991.556Stegastes_partitus
ENSXCOG00000011427u2surp9252.139ENSSPAG00000000916zgc:1630989552.431Stegastes_partitus
ENSXCOG00000011427u2surp9873.562ENSSSCG00000011684U2SURP8476.145Sus_scrofa
ENSXCOG00000011427u2surp9176.578ENSTGUG00000008687U2SURP8576.364Taeniopygia_guttata
ENSXCOG00000011427u2surp9387.681ENSTRUG00000017810u2surp9187.560Takifugu_rubripes
ENSXCOG00000011427u2surp9188.794ENSTNIG00000012767u2surp8788.672Tetraodon_nigroviridis
ENSXCOG00000011427u2surp8770.662ENSTBEG00000016313U2SURP7571.627Tupaia_belangeri
ENSXCOG00000011427u2surp9175.845ENSTTRG00000017170U2SURP7975.783Tursiops_truncatus
ENSXCOG00000011427u2surp9873.451ENSUAMG00000028259U2SURP8676.724Ursus_americanus
ENSXCOG00000011427u2surp9175.269ENSVPAG00000004697U2SURP8075.904Vicugna_pacos
ENSXCOG00000011427u2surp9873.451ENSVVUG00000021495U2SURP8476.024Vulpes_vulpes
ENSXCOG00000011427u2surp9275.952ENSXETG00000022133u2surp8575.476Xenopus_tropicalis
ENSXCOG00000011427u2surp9295.278ENSXMAG00000002608u2surp9195.278Xiphophorus_maculatus
ENSXCOG00000011427u2surp9350.930ENSXMAG00000012662zgc:1630988853.750Xiphophorus_maculatus

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