EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000011438 (Gene tree)
Gene ID: -
Gene Symbol: mrpl4
Alias: si:dkey-23f9.3|zgc:110034|zgmrpl4
Full Name: mitochondrial ribosomal protein L4
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 4949 bases
Position: chrKQ557220.1:6262645-6267593
Accession: ZDB-GENE-050522-388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000015102	Ribosomal_L4	PF00573.22	7.2e-51	1	1
ENSXCOP00000015099	Ribosomal_L4	PF00573.22	7.7e-51	1	1
ENSXCOP00000015104	Ribosomal_L4	PF00573.22	7.7e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000015293	-	912	-	ENSXCOP00000015104	303 (aa)	-	-
ENSXCOT00000015291	-	915	-	ENSXCOP00000015102	304 (aa)	-	-
ENSXCOT00000015288	-	924	-	ENSXCOP00000015099	307 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000011438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011438's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000011438	mrpl4	82	64.542	ENSG00000105364	MRPL4	100	70.248	Homo_sapiens
ENSXCOG00000011438	mrpl4	100	81.908	ENSAPOG00000010156	mrpl4	100	81.908	Acanthochromis_polyacanthus
ENSXCOG00000011438	mrpl4	82	64.542	ENSAMEG00000011808	MRPL4	85	64.542	Ailuropoda_melanoleuca
ENSXCOG00000011438	mrpl4	95	84.247	ENSACIG00000011523	mrpl4	96	84.247	Amphilophus_citrinellus
ENSXCOG00000011438	mrpl4	99	79.114	ENSAOCG00000018507	mrpl4	98	79.114	Amphiprion_ocellaris
ENSXCOG00000011438	mrpl4	100	82.566	ENSAPEG00000006208	mrpl4	100	82.566	Amphiprion_percula
ENSXCOG00000011438	mrpl4	100	78.947	ENSATEG00000021694	mrpl4	100	78.947	Anabas_testudineus
ENSXCOG00000011438	mrpl4	97	63.051	ENSACAG00000008232	MRPL4	97	63.051	Anolis_carolinensis
ENSXCOG00000011438	mrpl4	82	63.347	ENSANAG00000025428	MRPL4	87	63.347	Aotus_nancymaae
ENSXCOG00000011438	mrpl4	100	82.895	ENSACLG00000017038	mrpl4	100	82.895	Astatotilapia_calliptera
ENSXCOG00000011438	mrpl4	99	64.686	ENSAMXG00000002236	mrpl4	99	64.686	Astyanax_mexicanus
ENSXCOG00000011438	mrpl4	70	42.991	WBGene00020717	mrpl-4	71	42.991	Caenorhabditis_elegans
ENSXCOG00000011438	mrpl4	100	56.066	ENSCJAG00000005764	MRPL4	99	56.066	Callithrix_jacchus
ENSXCOG00000011438	mrpl4	82	65.737	ENSCAFG00000017881	MRPL4	85	65.737	Canis_familiaris
ENSXCOG00000011438	mrpl4	82	65.737	ENSCAFG00020024405	MRPL4	83	65.737	Canis_lupus_dingo
ENSXCOG00000011438	mrpl4	82	66.932	ENSCHIG00000000516	MRPL4	85	66.932	Capra_hircus
ENSXCOG00000011438	mrpl4	83	65.613	ENSTSYG00000034805	MRPL4	85	65.613	Carlito_syrichta
ENSXCOG00000011438	mrpl4	67	68.137	ENSCAPG00000000036	MRPL4	100	68.137	Cavia_aperea
ENSXCOG00000011438	mrpl4	86	62.977	ENSCPOG00000006506	MRPL4	88	62.977	Cavia_porcellus
ENSXCOG00000011438	mrpl4	100	43.421	ENSCCAG00000036054	MRPL4	99	44.737	Cebus_capucinus
ENSXCOG00000011438	mrpl4	100	57.003	ENSCLAG00000004552	MRPL4	99	57.003	Chinchilla_lanigera
ENSXCOG00000011438	mrpl4	82	65.339	ENSCSAG00000007362	MRPL4	84	65.339	Chlorocebus_sabaeus
ENSXCOG00000011438	mrpl4	85	64.341	ENSCPBG00000005432	MRPL4	99	64.800	Chrysemys_picta_bellii
ENSXCOG00000011438	mrpl4	94	35.517	ENSCING00000003144	-	91	35.517	Ciona_intestinalis
ENSXCOG00000011438	mrpl4	99	33.657	ENSCSAVG00000007005	-	99	33.657	Ciona_savignyi
ENSXCOG00000011438	mrpl4	81	41.532	ENSCANG00000033167	MRPL4	60	41.532	Colobus_angolensis_palliatus
ENSXCOG00000011438	mrpl4	95	57.823	ENSCGRG00001013642	Mrpl4	99	57.823	Cricetulus_griseus_chok1gshd
ENSXCOG00000011438	mrpl4	95	57.823	ENSCGRG00000012922	Mrpl4	99	57.823	Cricetulus_griseus_crigri
ENSXCOG00000011438	mrpl4	100	77.961	ENSCSEG00000020580	mrpl4	100	77.961	Cynoglossus_semilaevis
ENSXCOG00000011438	mrpl4	50	79.085	ENSCVAG00000017296	mrpl4	87	78.443	Cyprinodon_variegatus
ENSXCOG00000011438	mrpl4	100	66.447	ENSDARG00000058824	mrpl4	100	66.447	Danio_rerio
ENSXCOG00000011438	mrpl4	82	63.454	ENSDNOG00000044263	-	99	56.066	Dasypus_novemcinctus
ENSXCOG00000011438	mrpl4	85	59.302	ENSDNOG00000010139	-	89	59.302	Dasypus_novemcinctus
ENSXCOG00000011438	mrpl4	82	65.339	ENSDORG00000003723	Mrpl4	98	65.339	Dipodomys_ordii
ENSXCOG00000011438	mrpl4	80	48.770	FBgn0001995	mRpL4	82	48.770	Drosophila_melanogaster
ENSXCOG00000011438	mrpl4	82	66.000	ENSETEG00000002009	MRPL4	84	66.000	Echinops_telfairi
ENSXCOG00000011438	mrpl4	96	53.584	ENSEBUG00000016597	mrpl4	94	53.041	Eptatretus_burgeri
ENSXCOG00000011438	mrpl4	89	62.637	ENSEASG00005010556	MRPL4	90	62.637	Equus_asinus_asinus
ENSXCOG00000011438	mrpl4	82	66.534	ENSECAG00000017013	MRPL4	83	66.534	Equus_caballus
ENSXCOG00000011438	mrpl4	63	66.667	ENSEEUG00000012011	MRPL4	64	66.897	Erinaceus_europaeus
ENSXCOG00000011438	mrpl4	100	73.026	ENSELUG00000010463	mrpl4	100	73.026	Esox_lucius
ENSXCOG00000011438	mrpl4	67	63.235	ENSFCAG00000043071	MRPL4	78	63.235	Felis_catus
ENSXCOG00000011438	mrpl4	75	66.079	ENSFDAG00000001936	MRPL4	100	66.079	Fukomys_damarensis
ENSXCOG00000011438	mrpl4	100	86.513	ENSFHEG00000003126	mrpl4	100	86.513	Fundulus_heteroclitus
ENSXCOG00000011438	mrpl4	94	74.825	ENSGMOG00000007229	mrpl4	100	74.825	Gadus_morhua
ENSXCOG00000011438	mrpl4	100	96.053	ENSGAFG00000018136	mrpl4	100	96.053	Gambusia_affinis
ENSXCOG00000011438	mrpl4	100	75.410	ENSGACG00000019808	mrpl4	100	75.410	Gasterosteus_aculeatus
ENSXCOG00000011438	mrpl4	100	58.882	ENSGAGG00000018010	MRPL4	100	58.882	Gopherus_agassizii
ENSXCOG00000011438	mrpl4	82	63.745	ENSGGOG00000036529	-	80	63.745	Gorilla_gorilla
ENSXCOG00000011438	mrpl4	100	82.895	ENSHBUG00000006332	mrpl4	100	82.895	Haplochromis_burtoni
ENSXCOG00000011438	mrpl4	100	57.468	ENSHGLG00000007839	MRPL4	99	57.468	Heterocephalus_glaber_female
ENSXCOG00000011438	mrpl4	90	62.319	ENSHGLG00100002720	MRPL4	97	62.319	Heterocephalus_glaber_male
ENSXCOG00000011438	mrpl4	94	71.429	ENSHCOG00000002016	mrpl4	96	71.429	Hippocampus_comes
ENSXCOG00000011438	mrpl4	100	67.763	ENSIPUG00000011705	mrpl4	100	66.032	Ictalurus_punctatus
ENSXCOG00000011438	mrpl4	61	66.310	ENSSTOG00000030121	MRPL4	93	66.310	Ictidomys_tridecemlineatus
ENSXCOG00000011438	mrpl4	82	63.745	ENSJJAG00000010573	Mrpl4	85	63.745	Jaculus_jaculus
ENSXCOG00000011438	mrpl4	100	80.263	ENSKMAG00000012769	mrpl4	99	80.263	Kryptolebias_marmoratus
ENSXCOG00000011438	mrpl4	100	77.961	ENSLBEG00000000848	mrpl4	100	77.961	Labrus_bergylta
ENSXCOG00000011438	mrpl4	99	60.726	ENSLACG00000009255	MRPL4	92	60.726	Latimeria_chalumnae
ENSXCOG00000011438	mrpl4	100	66.118	ENSLOCG00000016632	mrpl4	99	66.118	Lepisosteus_oculatus
ENSXCOG00000011438	mrpl4	100	57.705	ENSLAFG00000015366	MRPL4	99	57.705	Loxodonta_africana
ENSXCOG00000011438	mrpl4	82	64.940	ENSMFAG00000003526	MRPL4	80	64.940	Macaca_fascicularis
ENSXCOG00000011438	mrpl4	82	64.940	ENSMMUG00000001219	MRPL4	84	64.940	Macaca_mulatta
ENSXCOG00000011438	mrpl4	82	64.940	ENSMNEG00000040746	MRPL4	84	64.940	Macaca_nemestrina
ENSXCOG00000011438	mrpl4	82	56.972	ENSMLEG00000041712	MRPL4	83	56.972	Mandrillus_leucophaeus
ENSXCOG00000011438	mrpl4	100	79.934	ENSMAMG00000001736	mrpl4	100	79.934	Mastacembelus_armatus
ENSXCOG00000011438	mrpl4	100	82.895	ENSMZEG00005005809	mrpl4	100	82.895	Maylandia_zebra
ENSXCOG00000011438	mrpl4	95	57.823	ENSMAUG00000013451	Mrpl4	99	57.823	Mesocricetus_auratus
ENSXCOG00000011438	mrpl4	82	66.534	ENSMICG00000010267	MRPL4	83	66.534	Microcebus_murinus
ENSXCOG00000011438	mrpl4	95	57.931	ENSMOCG00000014755	Mrpl4	99	57.931	Microtus_ochrogaster
ENSXCOG00000011438	mrpl4	100	68.750	ENSMMOG00000013673	mrpl4	100	68.750	Mola_mola
ENSXCOG00000011438	mrpl4	96	60.135	ENSMODG00000005476	MRPL4	96	60.135	Monodelphis_domestica
ENSXCOG00000011438	mrpl4	95	79.585	ENSMALG00000002391	mrpl4	93	80.000	Monopterus_albus
ENSXCOG00000011438	mrpl4	84	63.077	MGP_CAROLIEiJ_G0031854	Mrpl4	88	63.077	Mus_caroli
ENSXCOG00000011438	mrpl4	84	63.462	ENSMUSG00000003299	Mrpl4	88	63.462	Mus_musculus
ENSXCOG00000011438	mrpl4	84	62.692	MGP_PahariEiJ_G0014720	Mrpl4	88	62.692	Mus_pahari
ENSXCOG00000011438	mrpl4	84	63.077	MGP_SPRETEiJ_G0032978	Mrpl4	88	63.077	Mus_spretus
ENSXCOG00000011438	mrpl4	82	64.940	ENSMPUG00000006825	MRPL4	85	64.940	Mustela_putorius_furo
ENSXCOG00000011438	mrpl4	82	66.135	ENSMLUG00000012280	MRPL4	97	66.135	Myotis_lucifugus
ENSXCOG00000011438	mrpl4	84	61.479	ENSNGAG00000014705	Mrpl4	89	61.479	Nannospalax_galili
ENSXCOG00000011438	mrpl4	100	82.895	ENSNBRG00000004804	mrpl4	100	82.895	Neolamprologus_brichardi
ENSXCOG00000011438	mrpl4	67	48.529	ENSNLEG00000012155	-	60	53.788	Nomascus_leucogenys
ENSXCOG00000011438	mrpl4	83	55.859	ENSMEUG00000002199	MRPL4	98	55.859	Notamacropus_eugenii
ENSXCOG00000011438	mrpl4	82	64.542	ENSOPRG00000005735	MRPL4	83	64.542	Ochotona_princeps
ENSXCOG00000011438	mrpl4	82	62.948	ENSODEG00000016194	MRPL4	86	62.948	Octodon_degus
ENSXCOG00000011438	mrpl4	100	82.237	ENSONIG00000000136	mrpl4	100	82.237	Oreochromis_niloticus
ENSXCOG00000011438	mrpl4	69	66.190	ENSOANG00000013891	MRPL4	100	66.190	Ornithorhynchus_anatinus
ENSXCOG00000011438	mrpl4	50	49.045	ENSOCUG00000029187	-	99	40.805	Oryctolagus_cuniculus
ENSXCOG00000011438	mrpl4	100	77.303	ENSORLG00000000085	mrpl4	96	77.303	Oryzias_latipes
ENSXCOG00000011438	mrpl4	100	76.316	ENSORLG00020020476	mrpl4	100	76.316	Oryzias_latipes_hni
ENSXCOG00000011438	mrpl4	100	76.645	ENSORLG00015020892	mrpl4	100	76.645	Oryzias_latipes_hsok
ENSXCOG00000011438	mrpl4	91	61.566	ENSOGAG00000011051	MRPL4	95	61.566	Otolemur_garnettii
ENSXCOG00000011438	mrpl4	77	68.376	ENSOARG00000015602	MRPL4	88	65.251	Ovis_aries
ENSXCOG00000011438	mrpl4	82	64.940	ENSPPAG00000041740	-	80	64.940	Pan_paniscus
ENSXCOG00000011438	mrpl4	67	63.725	ENSPPRG00000004312	MRPL4	80	63.725	Panthera_pardus
ENSXCOG00000011438	mrpl4	67	63.725	ENSPTIG00000010912	MRPL4	77	63.725	Panthera_tigris_altaica
ENSXCOG00000011438	mrpl4	82	64.542	ENSPTRG00000010462	MRPL4	80	64.542	Pan_troglodytes
ENSXCOG00000011438	mrpl4	82	64.542	ENSPANG00000001265	MRPL4	80	64.542	Papio_anubis
ENSXCOG00000011438	mrpl4	100	63.158	ENSPKIG00000008086	mrpl4	99	63.158	Paramormyrops_kingsleyae
ENSXCOG00000011438	mrpl4	95	76.389	ENSPMGG00000002329	mrpl4	99	76.573	Periophthalmus_magnuspinnatus
ENSXCOG00000011438	mrpl4	82	65.737	ENSPEMG00000017474	Mrpl4	87	65.737	Peromyscus_maniculatus_bairdii
ENSXCOG00000011438	mrpl4	81	63.265	ENSPMAG00000007691	mrpl4	95	63.265	Petromyzon_marinus
ENSXCOG00000011438	mrpl4	100	94.408	ENSPFOG00000013329	mrpl4	100	94.408	Poecilia_formosa
ENSXCOG00000011438	mrpl4	100	94.737	ENSPLAG00000012864	mrpl4	100	94.737	Poecilia_latipinna
ENSXCOG00000011438	mrpl4	100	94.408	ENSPMEG00000004937	mrpl4	100	94.408	Poecilia_mexicana
ENSXCOG00000011438	mrpl4	97	92.857	ENSPREG00000021621	mrpl4	99	93.950	Poecilia_reticulata
ENSXCOG00000011438	mrpl4	100	56.393	ENSPPYG00000009547	MRPL4	94	56.393	Pongo_abelii
ENSXCOG00000011438	mrpl4	66	59.113	ENSPCAG00000002385	MRPL4	84	59.113	Procavia_capensis
ENSXCOG00000011438	mrpl4	85	60.920	ENSPCOG00000016733	MRPL4	87	60.920	Propithecus_coquereli
ENSXCOG00000011438	mrpl4	89	47.253	ENSPVAG00000003681	MRPL4	87	47.253	Pteropus_vampyrus
ENSXCOG00000011438	mrpl4	100	82.566	ENSPNYG00000023505	mrpl4	100	82.566	Pundamilia_nyererei
ENSXCOG00000011438	mrpl4	100	67.434	ENSPNAG00000011785	mrpl4	89	67.434	Pygocentrus_nattereri
ENSXCOG00000011438	mrpl4	89	61.172	ENSRNOG00000020659	Mrpl4	92	61.172	Rattus_norvegicus
ENSXCOG00000011438	mrpl4	67	68.627	ENSRBIG00000032283	-	93	68.627	Rhinopithecus_bieti
ENSXCOG00000011438	mrpl4	100	57.049	ENSRROG00000003982	MRPL4	99	57.049	Rhinopithecus_roxellana
ENSXCOG00000011438	mrpl4	82	62.550	ENSSBOG00000020666	MRPL4	85	62.550	Saimiri_boliviensis_boliviensis
ENSXCOG00000011438	mrpl4	85	65.891	ENSSHAG00000008539	MRPL4	86	65.891	Sarcophilus_harrisii
ENSXCOG00000011438	mrpl4	100	65.461	ENSSFOG00015003308	mrpl4	99	65.461	Scleropages_formosus
ENSXCOG00000011438	mrpl4	92	73.214	ENSSMAG00000021118	mrpl4	97	71.769	Scophthalmus_maximus
ENSXCOG00000011438	mrpl4	100	83.224	ENSSDUG00000002078	mrpl4	100	83.224	Seriola_dumerili
ENSXCOG00000011438	mrpl4	100	83.224	ENSSLDG00000015083	mrpl4	100	83.224	Seriola_lalandi_dorsalis
ENSXCOG00000011438	mrpl4	100	79.934	ENSSPAG00000010120	mrpl4	100	79.934	Stegastes_partitus
ENSXCOG00000011438	mrpl4	82	66.932	ENSSSCG00000013656	MRPL4	90	66.932	Sus_scrofa
ENSXCOG00000011438	mrpl4	100	76.316	ENSTRUG00000008532	mrpl4	100	76.316	Takifugu_rubripes
ENSXCOG00000011438	mrpl4	100	70.820	ENSTNIG00000003265	mrpl4	100	70.820	Tetraodon_nigroviridis
ENSXCOG00000011438	mrpl4	74	58.696	ENSTBEG00000006336	MRPL4	93	58.696	Tupaia_belangeri
ENSXCOG00000011438	mrpl4	89	60.806	ENSTTRG00000009532	MRPL4	87	60.806	Tursiops_truncatus
ENSXCOG00000011438	mrpl4	68	61.836	ENSUAMG00000020392	MRPL4	67	61.836	Ursus_americanus
ENSXCOG00000011438	mrpl4	82	64.542	ENSUMAG00000025105	MRPL4	85	64.542	Ursus_maritimus
ENSXCOG00000011438	mrpl4	66	53.960	ENSVPAG00000006123	MRPL4	66	54.187	Vicugna_pacos
ENSXCOG00000011438	mrpl4	82	65.737	ENSVVUG00000028961	MRPL4	85	65.737	Vulpes_vulpes
ENSXCOG00000011438	mrpl4	94	64.460	ENSXETG00000022060	mrpl4	97	63.946	Xenopus_tropicalis
ENSXCOG00000011438	mrpl4	100	97.368	ENSXMAG00000030102	mrpl4	100	98.980	Xiphophorus_maculatus