EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000011498 (Gene tree)
Gene ID: -
Gene Symbol: ptrh1
Alias: zgc:112961
Full Name: peptidyl-tRNA hydrolase 1 homolog
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 7425 bases
Position: chrKQ557204.1:31254834-31262258
Accession: ZDB-GENE-050306-33
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000015179	Pept_tRNA_hydro	PF01195.19	2.5e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000015369	-	705	-	ENSXCOP00000015179	234 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000011498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011498's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000011498	ptrh1	91	50.467	ENSG00000187024	PTRH1	93	52.500	Homo_sapiens
ENSXCOG00000011498	ptrh1	86	80.198	ENSAPOG00000010719	ptrh1	72	80.198	Acanthochromis_polyacanthus
ENSXCOG00000011498	ptrh1	86	80.198	ENSAPOG00000003014	-	72	80.198	Acanthochromis_polyacanthus
ENSXCOG00000011498	ptrh1	86	80.198	ENSAPOG00000000947	PTRH1	72	80.198	Acanthochromis_polyacanthus
ENSXCOG00000011498	ptrh1	74	53.448	ENSAMEG00000016791	PTRH1	86	52.174	Ailuropoda_melanoleuca
ENSXCOG00000011498	ptrh1	84	84.343	ENSACIG00000006734	ptrh1	85	84.343	Amphilophus_citrinellus
ENSXCOG00000011498	ptrh1	95	72.222	ENSAOCG00000009725	ptrh1	72	81.281	Amphiprion_ocellaris
ENSXCOG00000011498	ptrh1	95	72.222	ENSAPEG00000020993	ptrh1	72	81.281	Amphiprion_percula
ENSXCOG00000011498	ptrh1	85	81.188	ENSATEG00000010003	ptrh1	72	81.188	Anabas_testudineus
ENSXCOG00000011498	ptrh1	91	52.804	ENSANAG00000025547	PTRH1	93	54.500	Aotus_nancymaae
ENSXCOG00000011498	ptrh1	86	80.097	ENSACLG00000025462	ptrh1	81	80.097	Astatotilapia_calliptera
ENSXCOG00000011498	ptrh1	86	67.662	ENSAMXG00000034117	ptrh1	75	67.662	Astyanax_mexicanus
ENSXCOG00000011498	ptrh1	62	56.944	ENSBTAG00000012736	PTRH1	50	57.447	Bos_taurus
ENSXCOG00000011498	ptrh1	86	53.234	ENSCJAG00000019841	PTRH1	71	56.923	Callithrix_jacchus
ENSXCOG00000011498	ptrh1	74	56.000	ENSCAFG00000020123	PTRH1	81	56.000	Canis_familiaris
ENSXCOG00000011498	ptrh1	74	56.322	ENSCAFG00020015776	PTRH1	78	56.322	Canis_lupus_dingo
ENSXCOG00000011498	ptrh1	89	54.067	ENSCHIG00000008188	PTRH1	93	55.000	Capra_hircus
ENSXCOG00000011498	ptrh1	55	56.250	ENSCAPG00000015926	PTRH1	92	56.250	Cavia_aperea
ENSXCOG00000011498	ptrh1	77	53.886	ENSCPOG00000023968	PTRH1	90	53.886	Cavia_porcellus
ENSXCOG00000011498	ptrh1	86	52.970	ENSCCAG00000023134	PTRH1	93	53.000	Cebus_capucinus
ENSXCOG00000011498	ptrh1	91	50.467	ENSCATG00000042852	PTRH1	93	52.500	Cercocebus_atys
ENSXCOG00000011498	ptrh1	85	53.000	ENSCLAG00000011155	PTRH1	93	53.000	Chinchilla_lanigera
ENSXCOG00000011498	ptrh1	91	50.467	ENSCSAG00000013748	PTRH1	88	52.500	Chlorocebus_sabaeus
ENSXCOG00000011498	ptrh1	71	53.892	ENSCPBG00000025207	PTRH1	95	53.892	Chrysemys_picta_bellii
ENSXCOG00000011498	ptrh1	84	52.792	ENSCANG00000039856	PTRH1	92	52.792	Colobus_angolensis_palliatus
ENSXCOG00000011498	ptrh1	79	55.978	ENSCGRG00001013108	Ptrh1	89	55.978	Cricetulus_griseus_chok1gshd
ENSXCOG00000011498	ptrh1	79	55.978	ENSCGRG00000016553	Ptrh1	99	55.978	Cricetulus_griseus_crigri
ENSXCOG00000011498	ptrh1	86	68.720	ENSCSEG00000010332	ptrh1	77	68.720	Cynoglossus_semilaevis
ENSXCOG00000011498	ptrh1	86	83.582	ENSCVAG00000010701	ptrh1	74	83.582	Cyprinodon_variegatus
ENSXCOG00000011498	ptrh1	95	61.261	ENSDARG00000098206	ptrh1	85	65.990	Danio_rerio
ENSXCOG00000011498	ptrh1	82	54.974	ENSDNOG00000024194	PTRH1	88	55.026	Dasypus_novemcinctus
ENSXCOG00000011498	ptrh1	91	51.628	ENSDORG00000013321	Ptrh1	93	52.736	Dipodomys_ordii
ENSXCOG00000011498	ptrh1	91	51.402	ENSEASG00005020466	PTRH1	85	56.044	Equus_asinus_asinus
ENSXCOG00000011498	ptrh1	91	51.869	ENSECAG00000007615	PTRH1	67	56.044	Equus_caballus
ENSXCOG00000011498	ptrh1	87	69.951	ENSELUG00000015467	ptrh1	75	69.951	Esox_lucius
ENSXCOG00000011498	ptrh1	74	56.897	ENSFCAG00000001483	PTRH1	82	56.897	Felis_catus
ENSXCOG00000011498	ptrh1	76	51.412	ENSFALG00000001352	PTRH1	84	51.412	Ficedula_albicollis
ENSXCOG00000011498	ptrh1	78	56.593	ENSFDAG00000020077	PTRH1	89	56.593	Fukomys_damarensis
ENSXCOG00000011498	ptrh1	79	87.701	ENSFHEG00000010590	ptrh1	77	86.207	Fundulus_heteroclitus
ENSXCOG00000011498	ptrh1	88	93.204	ENSGAFG00000016215	ptrh1	85	94.554	Gambusia_affinis
ENSXCOG00000011498	ptrh1	72	80.357	ENSGACG00000014682	ptrh1	88	79.882	Gasterosteus_aculeatus
ENSXCOG00000011498	ptrh1	80	57.219	ENSGAGG00000022860	PTRH1	83	57.219	Gopherus_agassizii
ENSXCOG00000011498	ptrh1	91	50.000	ENSGGOG00000011033	PTRH1	93	52.000	Gorilla_gorilla
ENSXCOG00000011498	ptrh1	85	80.392	ENSHBUG00000020824	ptrh1	73	80.392	Haplochromis_burtoni
ENSXCOG00000011498	ptrh1	84	54.822	ENSHGLG00000019147	PTRH1	96	54.822	Heterocephalus_glaber_female
ENSXCOG00000011498	ptrh1	84	51.777	ENSHGLG00100003681	PTRH1	98	51.777	Heterocephalus_glaber_male
ENSXCOG00000011498	ptrh1	76	73.596	ENSHCOG00000014772	ptrh1	72	70.899	Hippocampus_comes
ENSXCOG00000011498	ptrh1	89	65.865	ENSIPUG00000015364	ptrh1	81	65.865	Ictalurus_punctatus
ENSXCOG00000011498	ptrh1	80	55.319	ENSSTOG00000008942	PTRH1	93	52.500	Ictidomys_tridecemlineatus
ENSXCOG00000011498	ptrh1	85	53.500	ENSJJAG00000014338	Ptrh1	97	53.500	Jaculus_jaculus
ENSXCOG00000011498	ptrh1	88	82.927	ENSKMAG00000003253	ptrh1	74	82.927	Kryptolebias_marmoratus
ENSXCOG00000011498	ptrh1	63	73.469	ENSLBEG00000028842	ptrh1	83	76.429	Labrus_bergylta
ENSXCOG00000011498	ptrh1	78	58.919	ENSLACG00000016741	PTRH1	76	58.919	Latimeria_chalumnae
ENSXCOG00000011498	ptrh1	82	50.777	ENSLAFG00000021934	PTRH1	95	50.777	Loxodonta_africana
ENSXCOG00000011498	ptrh1	91	50.467	ENSMFAG00000001700	PTRH1	93	52.500	Macaca_fascicularis
ENSXCOG00000011498	ptrh1	91	50.467	ENSMMUG00000016424	PTRH1	93	52.500	Macaca_mulatta
ENSXCOG00000011498	ptrh1	91	50.467	ENSMNEG00000033061	PTRH1	88	52.500	Macaca_nemestrina
ENSXCOG00000011498	ptrh1	84	79.188	ENSMAMG00000017386	ptrh1	72	79.188	Mastacembelus_armatus
ENSXCOG00000011498	ptrh1	85	80.693	ENSMZEG00005020001	ptrh1	80	80.693	Maylandia_zebra
ENSXCOG00000011498	ptrh1	79	57.065	ENSMAUG00000006266	Ptrh1	89	57.065	Mesocricetus_auratus
ENSXCOG00000011498	ptrh1	81	54.497	ENSMICG00000005611	PTRH1	88	54.497	Microcebus_murinus
ENSXCOG00000011498	ptrh1	77	56.906	ENSMOCG00000013992	Ptrh1	89	56.906	Microtus_ochrogaster
ENSXCOG00000011498	ptrh1	86	77.184	ENSMMOG00000014747	ptrh1	73	78.641	Mola_mola
ENSXCOG00000011498	ptrh1	87	51.724	ENSMODG00000005503	PTRH1	84	55.191	Monodelphis_domestica
ENSXCOG00000011498	ptrh1	65	76.974	ENSMALG00000005392	ptrh1	89	76.974	Monopterus_albus
ENSXCOG00000011498	ptrh1	73	59.649	MGP_CAROLIEiJ_G0023450	Ptrh1	84	59.649	Mus_caroli
ENSXCOG00000011498	ptrh1	73	59.649	ENSMUSG00000053746	Ptrh1	84	59.649	Mus_musculus
ENSXCOG00000011498	ptrh1	73	59.649	MGP_PahariEiJ_G0024907	Ptrh1	84	59.649	Mus_pahari
ENSXCOG00000011498	ptrh1	73	59.064	MGP_SPRETEiJ_G0024367	Ptrh1	84	59.064	Mus_spretus
ENSXCOG00000011498	ptrh1	74	55.682	ENSMPUG00000013790	PTRH1	85	54.301	Mustela_putorius_furo
ENSXCOG00000011498	ptrh1	83	51.208	ENSMLUG00000013454	PTRH1	92	50.739	Myotis_lucifugus
ENSXCOG00000011498	ptrh1	86	53.234	ENSNGAG00000014008	Ptrh1	89	56.044	Nannospalax_galili
ENSXCOG00000011498	ptrh1	86	79.612	ENSNBRG00000015590	ptrh1	74	79.612	Neolamprologus_brichardi
ENSXCOG00000011498	ptrh1	86	51.980	ENSNLEG00000017468	PTRH1	93	52.000	Nomascus_leucogenys
ENSXCOG00000011498	ptrh1	85	53.500	ENSODEG00000004012	PTRH1	93	53.571	Octodon_degus
ENSXCOG00000011498	ptrh1	86	77.184	ENSONIG00000013912	ptrh1	79	79.612	Oreochromis_niloticus
ENSXCOG00000011498	ptrh1	81	52.910	ENSOANG00000011891	PTRH1	84	52.910	Ornithorhynchus_anatinus
ENSXCOG00000011498	ptrh1	84	52.792	ENSOCUG00000006894	PTRH1	85	52.792	Oryctolagus_cuniculus
ENSXCOG00000011498	ptrh1	79	55.978	ENSOGAG00000008094	PTRH1	96	52.451	Otolemur_garnettii
ENSXCOG00000011498	ptrh1	85	50.237	ENSOARG00000011808	PTRH1	94	50.239	Ovis_aries
ENSXCOG00000011498	ptrh1	91	50.467	ENSPPAG00000041782	PTRH1	93	52.500	Pan_paniscus
ENSXCOG00000011498	ptrh1	78	56.044	ENSPPRG00000007889	PTRH1	85	56.044	Panthera_pardus
ENSXCOG00000011498	ptrh1	51	53.333	ENSPTIG00000021082	-	94	53.333	Panthera_tigris_altaica
ENSXCOG00000011498	ptrh1	91	50.467	ENSPTRG00000021394	PTRH1	93	52.500	Pan_troglodytes
ENSXCOG00000011498	ptrh1	91	43.779	ENSPANG00000031755	PTRH1	93	45.320	Papio_anubis
ENSXCOG00000011498	ptrh1	84	63.776	ENSPKIG00000005449	ptrh1	65	63.776	Paramormyrops_kingsleyae
ENSXCOG00000011498	ptrh1	87	51.659	ENSPSIG00000013828	PTRH1	72	51.256	Pelodiscus_sinensis
ENSXCOG00000011498	ptrh1	73	68.421	ENSPMGG00000002148	ptrh1	70	63.235	Periophthalmus_magnuspinnatus
ENSXCOG00000011498	ptrh1	67	62.821	ENSPEMG00000014360	Ptrh1	89	58.152	Peromyscus_maniculatus_bairdii
ENSXCOG00000011498	ptrh1	88	93.204	ENSPFOG00000003715	ptrh1	78	93.204	Poecilia_formosa
ENSXCOG00000011498	ptrh1	98	84.348	ENSPLAG00000023354	ptrh1	81	94.059	Poecilia_latipinna
ENSXCOG00000011498	ptrh1	88	93.204	ENSPMEG00000000447	ptrh1	78	93.204	Poecilia_mexicana
ENSXCOG00000011498	ptrh1	88	90.777	ENSPREG00000012612	ptrh1	78	90.777	Poecilia_reticulata
ENSXCOG00000011498	ptrh1	86	49.505	ENSPPYG00000019628	PTRH1	87	49.500	Pongo_abelii
ENSXCOG00000011498	ptrh1	88	52.913	ENSPCAG00000007016	PTRH1	89	54.167	Procavia_capensis
ENSXCOG00000011498	ptrh1	80	54.255	ENSPCOG00000014541	PTRH1	87	54.255	Propithecus_coquereli
ENSXCOG00000011498	ptrh1	88	53.398	ENSPVAG00000000954	PTRH1	90	55.208	Pteropus_vampyrus
ENSXCOG00000011498	ptrh1	86	79.612	ENSPNYG00000007789	ptrh1	74	79.612	Pundamilia_nyererei
ENSXCOG00000011498	ptrh1	86	68.812	ENSPNAG00000029930	ptrh1	75	68.812	Pygocentrus_nattereri
ENSXCOG00000011498	ptrh1	73	59.064	ENSRNOG00000049034	Ptrh1	84	59.064	Rattus_norvegicus
ENSXCOG00000011498	ptrh1	91	50.467	ENSRBIG00000027290	PTRH1	93	52.500	Rhinopithecus_bieti
ENSXCOG00000011498	ptrh1	91	50.467	ENSRROG00000028799	PTRH1	88	52.500	Rhinopithecus_roxellana
ENSXCOG00000011498	ptrh1	74	32.240	YHR189W	PTH1	94	32.240	Saccharomyces_cerevisiae
ENSXCOG00000011498	ptrh1	91	51.402	ENSSBOG00000026699	PTRH1	88	52.500	Saimiri_boliviensis_boliviensis
ENSXCOG00000011498	ptrh1	74	57.303	ENSSHAG00000018238	PTRH1	87	57.303	Sarcophilus_harrisii
ENSXCOG00000011498	ptrh1	78	66.304	ENSSFOG00015007053	ptrh1	88	65.556	Scleropages_formosus
ENSXCOG00000011498	ptrh1	84	75.743	ENSSMAG00000016747	ptrh1	89	74.762	Scophthalmus_maximus
ENSXCOG00000011498	ptrh1	88	72.464	ENSSDUG00000013471	ptrh1	96	74.860	Seriola_dumerili
ENSXCOG00000011498	ptrh1	85	73.500	ENSSLDG00000024662	ptrh1	88	78.000	Seriola_lalandi_dorsalis
ENSXCOG00000011498	ptrh1	79	53.514	ENSSPUG00000000040	PTRH1	81	53.514	Sphenodon_punctatus
ENSXCOG00000011498	ptrh1	85	81.313	ENSSPAG00000003298	ptrh1	91	81.868	Stegastes_partitus
ENSXCOG00000011498	ptrh1	91	51.869	ENSSSCG00000005615	PTRH1	93	53.000	Sus_scrofa
ENSXCOG00000011498	ptrh1	57	57.463	ENSTGUG00000003648	PTRH1	100	57.463	Taeniopygia_guttata
ENSXCOG00000011498	ptrh1	85	75.743	ENSTRUG00000019801	PTRH1	75	75.490	Takifugu_rubripes
ENSXCOG00000011498	ptrh1	85	75.124	ENSTNIG00000016735	ptrh1	89	75.124	Tetraodon_nigroviridis
ENSXCOG00000011498	ptrh1	86	50.990	ENSTTRG00000016458	PTRH1	93	51.000	Tursiops_truncatus
ENSXCOG00000011498	ptrh1	79	55.435	ENSUAMG00000023948	-	82	55.435	Ursus_americanus
ENSXCOG00000011498	ptrh1	78	43.407	ENSVPAG00000001805	PTRH1	100	43.407	Vicugna_pacos
ENSXCOG00000011498	ptrh1	81	52.577	ENSVVUG00000013198	PTRH1	87	52.577	Vulpes_vulpes
ENSXCOG00000011498	ptrh1	75	56.000	ENSXETG00000009980	ptrh1	94	56.000	Xenopus_tropicalis
ENSXCOG00000011498	ptrh1	88	96.117	ENSXMAG00000009256	ptrh1	78	96.117	Xiphophorus_maculatus