EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000011552 (Gene tree)
Gene ID: -
Gene Symbol: tnpo3
Alias: zgc:55409
Full Name: transportin 3
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2725 bases
Position: chrKQ557209.1:90765-93489
Accession: ZDB-GENE-040426-708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000015245	Xpo1	PF08389.12	1.9e-25	1	1
ENSXCOP00000015245	IBN_N	PF03810.19	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000015436	-	876	-	ENSXCOP00000015245	291 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000011552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000011552	tnpo3	69	30.804	ENSXCOG00000007569	-	80	31.963

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000011552	tnpo3	97	54.417	ENSCSAVG00000008623	-	95	53.791	Ciona_savignyi
ENSXCOG00000011552	tnpo3	100	90.378	ENSCSEG00000005952	tnpo3	69	86.093	Cynoglossus_semilaevis
ENSXCOG00000011552	tnpo3	100	84.880	ENSECAG00000012815	TNPO3	59	84.880	Equus_caballus
ENSXCOG00000011552	tnpo3	100	83.618	ENSGALG00000039420	TNPO3	54	83.618	Gallus_gallus
ENSXCOG00000011552	tnpo3	100	99.656	ENSGAFG00000017639	tnpo3	100	99.656	Gambusia_affinis
ENSXCOG00000011552	tnpo3	100	89.691	ENSHCOG00000007221	tnpo3	63	86.395	Hippocampus_comes
ENSXCOG00000011552	tnpo3	70	32.701	ENSOANG00000006305	-	77	32.701	Ornithorhynchus_anatinus
ENSXCOG00000011552	tnpo3	77	81.333	ENSPSIG00000006156	-	57	81.333	Pelodiscus_sinensis
ENSXCOG00000011552	tnpo3	100	93.471	ENSPMGG00000009763	tnpo3	53	93.471	Periophthalmus_magnuspinnatus
ENSXCOG00000011552	tnpo3	100	98.969	ENSPMEG00000022731	tnpo3	66	98.969	Poecilia_mexicana
ENSXCOG00000011552	tnpo3	100	98.969	ENSPREG00000019847	tnpo3	100	98.969	Poecilia_reticulata
ENSXCOG00000011552	tnpo3	100	84.880	ENSSSCG00000016572	TNPO3	65	84.880	Sus_scrofa
ENSXCOG00000011552	tnpo3	65	82.105	ENSTGUG00000016200	-	98	82.105	Taeniopygia_guttata
ENSXCOG00000011552	tnpo3	100	85.911	ENSTRUG00000025251	tnpo3	100	84.983	Takifugu_rubripes