EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000011662 (Gene tree)
Gene ID: -
Gene Symbol: zc3h6
Alias: unm_hu7905
Full Name: zinc finger CCCH-type containing 6
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 11218 bases
Position: chrKQ557215.1:10376508-10387725
Accession: ZDB-GENE-120727-18
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000015410	zf-CCCH	PF00642.24	8.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000015600	-	2592	-	ENSXCOP00000015408	863 (aa)	-	-
ENSXCOT00000015602	-	2620	-	ENSXCOP00000015410	873 (aa)	-	-
ENSXCOT00000015597	-	2679	-	ENSXCOP00000015405	892 (aa)	-	-
ENSXCOT00000015605	-	2664	-	ENSXCOP00000015413	887 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000011662's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011662's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000011662	zc3h6	74	53.472	ENSG00000188177	ZC3H6	51	63.592	Homo_sapiens
ENSXCOG00000011662	zc3h6	86	96.000	ENSAPOG00000002681	zc3h6	69	100.000	Acanthochromis_polyacanthus
ENSXCOG00000011662	zc3h6	80	54.196	ENSAMEG00000016194	ZC3H6	56	64.078	Ailuropoda_melanoleuca
ENSXCOG00000011662	zc3h6	92	90.909	ENSACIG00000021843	zc3h6	72	100.000	Amphilophus_citrinellus
ENSXCOG00000011662	zc3h6	85	92.857	ENSAOCG00000004039	zc3h6	68	100.000	Amphiprion_ocellaris
ENSXCOG00000011662	zc3h6	85	92.857	ENSAPEG00000014561	zc3h6	68	100.000	Amphiprion_percula
ENSXCOG00000011662	zc3h6	87	89.286	ENSATEG00000019063	zc3h6	69	96.000	Anabas_testudineus
ENSXCOG00000011662	zc3h6	78	60.000	ENSAPLG00000014287	ZC3H6	59	62.557	Anas_platyrhynchos
ENSXCOG00000011662	zc3h6	75	52.542	ENSANAG00000024229	ZC3H6	51	63.592	Aotus_nancymaae
ENSXCOG00000011662	zc3h6	86	92.857	ENSACLG00000026343	zc3h6	69	100.000	Astatotilapia_calliptera
ENSXCOG00000011662	zc3h6	75	52.542	ENSCJAG00000016479	ZC3H6	51	63.592	Callithrix_jacchus
ENSXCOG00000011662	zc3h6	74	54.545	ENSCAFG00000007160	ZC3H6	57	61.712	Canis_familiaris
ENSXCOG00000011662	zc3h6	74	51.930	ENSCAFG00020017525	ZC3H6	57	58.371	Canis_lupus_dingo
ENSXCOG00000011662	zc3h6	66	62.439	ENSCHIG00000019719	-	62	62.439	Capra_hircus
ENSXCOG00000011662	zc3h6	72	56.458	ENSTSYG00000031857	ZC3H6	51	64.563	Carlito_syrichta
ENSXCOG00000011662	zc3h6	74	44.291	ENSCPOG00000003445	ZC3H6	52	50.220	Cavia_porcellus
ENSXCOG00000011662	zc3h6	74	53.472	ENSCATG00000036595	ZC3H6	57	63.592	Cercocebus_atys
ENSXCOG00000011662	zc3h6	72	56.015	ENSCLAG00000006605	ZC3H6	57	63.592	Chinchilla_lanigera
ENSXCOG00000011662	zc3h6	74	53.472	ENSCSAG00000016793	ZC3H6	57	63.592	Chlorocebus_sabaeus
ENSXCOG00000011662	zc3h6	74	53.497	ENSCANG00000041036	ZC3H6	52	63.592	Colobus_angolensis_palliatus
ENSXCOG00000011662	zc3h6	77	51.292	ENSCGRG00001022022	Zc3h6	58	58.222	Cricetulus_griseus_chok1gshd
ENSXCOG00000011662	zc3h6	77	52.593	ENSCGRG00000016162	Zc3h6	57	59.821	Cricetulus_griseus_crigri
ENSXCOG00000011662	zc3h6	81	67.134	ENSCSEG00000012267	zc3h6	78	66.580	Cynoglossus_semilaevis
ENSXCOG00000011662	zc3h6	70	57.540	ENSDNOG00000044811	ZC3H6	52	62.621	Dasypus_novemcinctus
ENSXCOG00000011662	zc3h6	74	52.203	ENSDORG00000013967	Zc3h6	51	63.107	Dipodomys_ordii
ENSXCOG00000011662	zc3h6	76	59.363	ENSEASG00005006493	ZC3H6	68	61.261	Equus_asinus_asinus
ENSXCOG00000011662	zc3h6	80	53.659	ENSECAG00000023620	ZC3H6	56	61.261	Equus_caballus
ENSXCOG00000011662	zc3h6	66	52.880	ENSEEUG00000013883	-	53	52.604	Erinaceus_europaeus
ENSXCOG00000011662	zc3h6	77	77.465	ENSELUG00000012256	zc3h6	62	73.684	Esox_lucius
ENSXCOG00000011662	zc3h6	75	54.545	ENSFCAG00000008089	ZC3H6	53	61.712	Felis_catus
ENSXCOG00000011662	zc3h6	82	55.439	ENSFALG00000011589	ZC3H6	58	62.150	Ficedula_albicollis
ENSXCOG00000011662	zc3h6	75	53.310	ENSFDAG00000002521	ZC3H6	55	63.592	Fukomys_damarensis
ENSXCOG00000011662	zc3h6	86	63.462	ENSGALG00000008269	ZC3H6	64	62.617	Gallus_gallus
ENSXCOG00000011662	zc3h6	84	98.333	ENSGAFG00000006771	zc3h6	81	98.333	Gambusia_affinis
ENSXCOG00000011662	zc3h6	84	80.556	ENSGACG00000005343	zc3h6	69	70.404	Gasterosteus_aculeatus
ENSXCOG00000011662	zc3h6	86	62.288	ENSGAGG00000010857	ZC3H6	66	62.791	Gopherus_agassizii
ENSXCOG00000011662	zc3h6	74	53.472	ENSGGOG00000001665	ZC3H6	51	63.592	Gorilla_gorilla
ENSXCOG00000011662	zc3h6	86	92.857	ENSHBUG00000010088	zc3h6	69	100.000	Haplochromis_burtoni
ENSXCOG00000011662	zc3h6	73	56.554	ENSHGLG00000011882	ZC3H6	52	60.262	Heterocephalus_glaber_female
ENSXCOG00000011662	zc3h6	75	51.724	ENSHGLG00100002559	ZC3H6	53	57.456	Heterocephalus_glaber_male
ENSXCOG00000011662	zc3h6	81	66.278	ENSHCOG00000012519	zc3h6	65	66.399	Hippocampus_comes
ENSXCOG00000011662	zc3h6	77	56.391	ENSSTOG00000008120	-	61	63.592	Ictidomys_tridecemlineatus
ENSXCOG00000011662	zc3h6	73	55.036	ENSJJAG00000013206	Zc3h6	51	63.107	Jaculus_jaculus
ENSXCOG00000011662	zc3h6	87	96.296	ENSKMAG00000016252	zc3h6	71	86.667	Kryptolebias_marmoratus
ENSXCOG00000011662	zc3h6	92	91.379	ENSLBEG00000003054	zc3h6	77	91.379	Labrus_bergylta
ENSXCOG00000011662	zc3h6	81	62.205	ENSLACG00000012014	ZC3H6	50	66.184	Latimeria_chalumnae
ENSXCOG00000011662	zc3h6	84	79.167	ENSLOCG00000016548	zc3h6	63	78.431	Lepisosteus_oculatus
ENSXCOG00000011662	zc3h6	74	53.873	ENSLAFG00000001151	ZC3H6	57	60.526	Loxodonta_africana
ENSXCOG00000011662	zc3h6	74	53.472	ENSMFAG00000036963	ZC3H6	51	63.592	Macaca_fascicularis
ENSXCOG00000011662	zc3h6	74	53.472	ENSMMUG00000016430	ZC3H6	51	63.592	Macaca_mulatta
ENSXCOG00000011662	zc3h6	74	53.472	ENSMNEG00000031225	ZC3H6	57	63.592	Macaca_nemestrina
ENSXCOG00000011662	zc3h6	74	53.472	ENSMLEG00000038821	ZC3H6	51	63.592	Mandrillus_leucophaeus
ENSXCOG00000011662	zc3h6	86	92.857	ENSMAMG00000021546	zc3h6	69	100.000	Mastacembelus_armatus
ENSXCOG00000011662	zc3h6	86	92.857	ENSMZEG00005006828	zc3h6	69	100.000	Maylandia_zebra
ENSXCOG00000011662	zc3h6	82	58.687	ENSMGAG00000003025	ZC3H6	65	62.617	Meleagris_gallopavo
ENSXCOG00000011662	zc3h6	71	52.574	ENSMAUG00000017009	Zc3h6	52	59.556	Mesocricetus_auratus
ENSXCOG00000011662	zc3h6	75	53.147	ENSMICG00000036353	ZC3H6	51	63.592	Microcebus_murinus
ENSXCOG00000011662	zc3h6	71	53.875	ENSMOCG00000002054	Zc3h6	53	60.360	Microtus_ochrogaster
ENSXCOG00000011662	zc3h6	72	54.511	ENSMODG00000006612	ZC3H6	53	56.769	Monodelphis_domestica
ENSXCOG00000011662	zc3h6	92	94.545	ENSMALG00000002048	zc3h6	75	91.379	Monopterus_albus
ENSXCOG00000011662	zc3h6	77	52.963	MGP_CAROLIEiJ_G0024278	Zc3h6	55	62.136	Mus_caroli
ENSXCOG00000011662	zc3h6	76	53.333	ENSMUSG00000042851	Zc3h6	56	59.459	Mus_musculus
ENSXCOG00000011662	zc3h6	76	52.222	MGP_PahariEiJ_G0025723	Zc3h6	55	62.376	Mus_pahari
ENSXCOG00000011662	zc3h6	76	53.333	MGP_SPRETEiJ_G0025198	Zc3h6	56	59.459	Mus_spretus
ENSXCOG00000011662	zc3h6	74	54.196	ENSMPUG00000009624	ZC3H6	59	64.078	Mustela_putorius_furo
ENSXCOG00000011662	zc3h6	75	54.167	ENSMLUG00000004896	ZC3H6	53	60.360	Myotis_lucifugus
ENSXCOG00000011662	zc3h6	74	51.903	ENSNGAG00000013596	Zc3h6	61	64.078	Nannospalax_galili
ENSXCOG00000011662	zc3h6	92	94.545	ENSNBRG00000015382	zc3h6	79	89.655	Neolamprologus_brichardi
ENSXCOG00000011662	zc3h6	71	55.039	ENSNLEG00000033657	ZC3H6	51	60.976	Nomascus_leucogenys
ENSXCOG00000011662	zc3h6	71	56.818	ENSOPRG00000012717	ZC3H6	51	64.078	Ochotona_princeps
ENSXCOG00000011662	zc3h6	72	56.015	ENSODEG00000009099	ZC3H6	58	63.592	Octodon_degus
ENSXCOG00000011662	zc3h6	86	89.286	ENSONIG00000009880	zc3h6	66	73.522	Oreochromis_niloticus
ENSXCOG00000011662	zc3h6	81	57.463	ENSOANG00000012054	-	66	66.019	Ornithorhynchus_anatinus
ENSXCOG00000011662	zc3h6	74	54.355	ENSOCUG00000011125	ZC3H6	56	64.563	Oryctolagus_cuniculus
ENSXCOG00000011662	zc3h6	86	92.000	ENSORLG00000011179	zc3h6	69	100.000	Oryzias_latipes
ENSXCOG00000011662	zc3h6	86	92.000	ENSORLG00020017202	zc3h6	69	100.000	Oryzias_latipes_hni
ENSXCOG00000011662	zc3h6	86	92.000	ENSORLG00015001664	zc3h6	69	100.000	Oryzias_latipes_hsok
ENSXCOG00000011662	zc3h6	86	92.000	ENSOMEG00000001296	zc3h6	67	100.000	Oryzias_melastigma
ENSXCOG00000011662	zc3h6	75	52.962	ENSOGAG00000002556	ZC3H6	52	63.592	Otolemur_garnettii
ENSXCOG00000011662	zc3h6	75	55.052	ENSOARG00000014503	ZC3H6	52	65.534	Ovis_aries
ENSXCOG00000011662	zc3h6	74	53.472	ENSPPAG00000030495	ZC3H6	52	63.592	Pan_paniscus
ENSXCOG00000011662	zc3h6	75	54.545	ENSPPRG00000005673	ZC3H6	53	61.712	Panthera_pardus
ENSXCOG00000011662	zc3h6	75	52.281	ENSPTIG00000015800	ZC3H6	53	58.824	Panthera_tigris_altaica
ENSXCOG00000011662	zc3h6	74	53.472	ENSPTRG00000012363	ZC3H6	51	63.592	Pan_troglodytes
ENSXCOG00000011662	zc3h6	74	53.846	ENSPANG00000025224	ZC3H6	51	63.592	Papio_anubis
ENSXCOG00000011662	zc3h6	77	71.041	ENSPKIG00000007353	zc3h6	76	75.124	Paramormyrops_kingsleyae
ENSXCOG00000011662	zc3h6	70	61.864	ENSPSIG00000002520	ZC3H6	52	65.174	Pelodiscus_sinensis
ENSXCOG00000011662	zc3h6	73	51.211	ENSPEMG00000000918	Zc3h6	53	60.360	Peromyscus_maniculatus_bairdii
ENSXCOG00000011662	zc3h6	80	61.089	ENSPCIG00000029741	ZC3H6	73	61.739	Phascolarctos_cinereus
ENSXCOG00000011662	zc3h6	83	89.783	ENSPFOG00000015748	zc3h6	69	89.783	Poecilia_formosa
ENSXCOG00000011662	zc3h6	79	88.757	ENSPLAG00000002469	zc3h6	66	88.757	Poecilia_latipinna
ENSXCOG00000011662	zc3h6	83	89.783	ENSPMEG00000020802	zc3h6	83	89.058	Poecilia_mexicana
ENSXCOG00000011662	zc3h6	100	86.562	ENSPREG00000023126	zc3h6	86	86.562	Poecilia_reticulata
ENSXCOG00000011662	zc3h6	75	52.218	ENSPCOG00000016627	ZC3H6	51	63.592	Propithecus_coquereli
ENSXCOG00000011662	zc3h6	92	94.545	ENSPNYG00000018130	zc3h6	75	89.655	Pundamilia_nyererei
ENSXCOG00000011662	zc3h6	84	75.385	ENSPNAG00000009331	zc3h6	67	54.326	Pygocentrus_nattereri
ENSXCOG00000011662	zc3h6	70	62.621	ENSRNOG00000026277	Zc3h6	55	62.621	Rattus_norvegicus
ENSXCOG00000011662	zc3h6	75	52.542	ENSSBOG00000033489	ZC3H6	57	63.592	Saimiri_boliviensis_boliviensis
ENSXCOG00000011662	zc3h6	70	58.687	ENSSHAG00000016634	ZC3H6	62	60.870	Sarcophilus_harrisii
ENSXCOG00000011662	zc3h6	87	76.271	ENSSFOG00015004488	zc3h6	67	49.223	Scleropages_formosus
ENSXCOG00000011662	zc3h6	86	89.286	ENSSMAG00000008411	zc3h6	64	70.833	Scophthalmus_maximus
ENSXCOG00000011662	zc3h6	87	92.857	ENSSDUG00000006105	zc3h6	68	100.000	Seriola_dumerili
ENSXCOG00000011662	zc3h6	87	92.857	ENSSLDG00000021813	zc3h6	68	100.000	Seriola_lalandi_dorsalis
ENSXCOG00000011662	zc3h6	77	51.211	ENSSARG00000001035	ZC3H6	54	62.927	Sorex_araneus
ENSXCOG00000011662	zc3h6	57	57.143	ENSSPUG00000013031	-	50	46.606	Sphenodon_punctatus
ENSXCOG00000011662	zc3h6	74	54.266	ENSSSCG00000008096	ZC3H6	57	65.534	Sus_scrofa
ENSXCOG00000011662	zc3h6	82	58.140	ENSTGUG00000007468	ZC3H6	58	62.441	Taeniopygia_guttata
ENSXCOG00000011662	zc3h6	87	82.143	ENSTRUG00000012901	zc3h6	67	68.340	Takifugu_rubripes
ENSXCOG00000011662	zc3h6	81	78.879	ENSTNIG00000016608	zc3h6	67	86.567	Tetraodon_nigroviridis
ENSXCOG00000011662	zc3h6	80	54.545	ENSUAMG00000002401	ZC3H6	62	64.563	Ursus_americanus
ENSXCOG00000011662	zc3h6	80	54.545	ENSUMAG00000008663	ZC3H6	64	64.563	Ursus_maritimus
ENSXCOG00000011662	zc3h6	75	53.846	ENSVPAG00000005912	ZC3H6	52	64.078	Vicugna_pacos
ENSXCOG00000011662	zc3h6	74	54.545	ENSVVUG00000028662	ZC3H6	64	61.712	Vulpes_vulpes
ENSXCOG00000011662	zc3h6	81	36.304	ENSXETG00000013762	zc3h6	64	36.917	Xenopus_tropicalis
ENSXCOG00000011662	zc3h6	89	98.333	ENSXMAG00000020822	zc3h6	73	98.333	Xiphophorus_maculatus