EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000011731 (Gene tree)
Gene ID: -
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3711 bases
Position: chrKQ557216.1:24446112-24449822
Accession: ZDB-GENE-040930-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000015512	RNA_pol_L_2	PF13656.6	7.5e-30	1	1
ENSXCOP00000015512	RNA_pol_L	PF01193.24	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000015705	-	393	-	ENSXCOP00000015512	130 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000011731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011731's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000011731	polr1d	75	75.510	ENSG00000186184	POLR1D	84	75.510	Homo_sapiens
ENSXCOG00000011731	polr1d	77	88.000	ENSAPOG00000021882	polr1d	94	88.000	Acanthochromis_polyacanthus
ENSXCOG00000011731	polr1d	75	75.510	ENSAMEG00000019095	POLR1D	78	75.510	Ailuropoda_melanoleuca
ENSXCOG00000011731	polr1d	77	88.000	ENSACIG00000013328	polr1d	87	88.000	Amphilophus_citrinellus
ENSXCOG00000011731	polr1d	80	84.615	ENSAOCG00000018500	polr1d	91	84.615	Amphiprion_ocellaris
ENSXCOG00000011731	polr1d	77	88.000	ENSAPEG00000009489	polr1d	91	84.615	Amphiprion_percula
ENSXCOG00000011731	polr1d	77	88.000	ENSATEG00000019322	polr1d	89	88.000	Anabas_testudineus
ENSXCOG00000011731	polr1d	75	70.103	ENSACAG00000015753	POLR1D	84	70.103	Anolis_carolinensis
ENSXCOG00000011731	polr1d	75	75.510	ENSANAG00000024486	POLR1D	74	75.510	Aotus_nancymaae
ENSXCOG00000011731	polr1d	77	90.000	ENSACLG00000023805	polr1d	88	90.000	Astatotilapia_calliptera
ENSXCOG00000011731	polr1d	77	78.000	ENSAMXG00000036118	polr1d	87	78.000	Astyanax_mexicanus
ENSXCOG00000011731	polr1d	75	75.510	ENSBTAG00000008642	POLR1D	74	75.510	Bos_taurus
ENSXCOG00000011731	polr1d	75	75.510	ENSBTAG00000033252	-	74	75.510	Bos_taurus
ENSXCOG00000011731	polr1d	62	38.750	WBGene00010230	rpac-19	56	38.750	Caenorhabditis_elegans
ENSXCOG00000011731	polr1d	75	75.510	ENSCJAG00000044669	POLR1D	74	75.510	Callithrix_jacchus
ENSXCOG00000011731	polr1d	75	75.510	ENSCAFG00000006755	POLR1D	74	75.510	Canis_familiaris
ENSXCOG00000011731	polr1d	75	74.490	ENSCHIG00000021910	POLR1D	74	74.490	Capra_hircus
ENSXCOG00000011731	polr1d	75	76.289	ENSTSYG00000026817	-	73	76.289	Carlito_syrichta
ENSXCOG00000011731	polr1d	75	65.657	ENSTSYG00000034852	-	82	65.657	Carlito_syrichta
ENSXCOG00000011731	polr1d	75	76.531	ENSCCAG00000021349	-	74	76.531	Cebus_capucinus
ENSXCOG00000011731	polr1d	75	58.163	ENSCCAG00000020191	-	71	58.163	Cebus_capucinus
ENSXCOG00000011731	polr1d	75	75.510	ENSCATG00000030710	-	74	75.510	Cercocebus_atys
ENSXCOG00000011731	polr1d	75	64.948	ENSCATG00000022900	-	71	64.948	Cercocebus_atys
ENSXCOG00000011731	polr1d	75	74.490	ENSCLAG00000017623	POLR1D	79	74.490	Chinchilla_lanigera
ENSXCOG00000011731	polr1d	78	78.218	ENSCPBG00000004719	POLR1D	100	78.218	Chrysemys_picta_bellii
ENSXCOG00000011731	polr1d	75	75.510	ENSCANG00000028632	-	74	75.510	Colobus_angolensis_palliatus
ENSXCOG00000011731	polr1d	75	75.258	ENSCANG00000037694	-	73	75.258	Colobus_angolensis_palliatus
ENSXCOG00000011731	polr1d	75	75.510	ENSCGRG00001021251	Polr1d	74	75.510	Cricetulus_griseus_chok1gshd
ENSXCOG00000011731	polr1d	75	75.510	ENSCGRG00000011639	Polr1d	74	75.510	Cricetulus_griseus_crigri
ENSXCOG00000011731	polr1d	78	86.139	ENSCSEG00000018268	polr1d	86	86.139	Cynoglossus_semilaevis
ENSXCOG00000011731	polr1d	78	91.089	ENSCVAG00000018527	polr1d	89	91.089	Cyprinodon_variegatus
ENSXCOG00000011731	polr1d	73	75.789	ENSDARG00000037570	polr1d	85	75.789	Danio_rerio
ENSXCOG00000011731	polr1d	75	73.469	ENSDNOG00000046247	-	73	73.469	Dasypus_novemcinctus
ENSXCOG00000011731	polr1d	75	74.490	ENSDNOG00000043676	-	74	74.490	Dasypus_novemcinctus
ENSXCOG00000011731	polr1d	75	75.510	ENSDORG00000029155	Polr1d	74	75.510	Dipodomys_ordii
ENSXCOG00000011731	polr1d	71	44.565	FBgn0086447	l(2)37Cg	87	44.565	Drosophila_melanogaster
ENSXCOG00000011731	polr1d	75	74.490	ENSETEG00000012797	POLR1D	79	74.490	Echinops_telfairi
ENSXCOG00000011731	polr1d	93	51.938	ENSEBUG00000011748	polr1d	88	51.938	Eptatretus_burgeri
ENSXCOG00000011731	polr1d	75	75.510	ENSEASG00005022487	POLR1D	76	75.510	Equus_asinus_asinus
ENSXCOG00000011731	polr1d	75	75.510	ENSEEUG00000013144	POLR1D	79	75.510	Erinaceus_europaeus
ENSXCOG00000011731	polr1d	76	83.000	ENSELUG00000005105	rpac2	88	83.000	Esox_lucius
ENSXCOG00000011731	polr1d	75	75.510	ENSFCAG00000030162	POLR1D	74	75.510	Felis_catus
ENSXCOG00000011731	polr1d	66	82.558	ENSFALG00000011463	POLR1D	85	82.558	Ficedula_albicollis
ENSXCOG00000011731	polr1d	75	73.469	ENSFDAG00000004463	POLR1D	74	73.469	Fukomys_damarensis
ENSXCOG00000011731	polr1d	78	90.099	ENSFHEG00000015410	polr1d	88	90.099	Fundulus_heteroclitus
ENSXCOG00000011731	polr1d	78	97.030	ENSGAFG00000001693	polr1d	89	97.030	Gambusia_affinis
ENSXCOG00000011731	polr1d	78	86.139	ENSGACG00000018585	polr1d	86	86.139	Gasterosteus_aculeatus
ENSXCOG00000011731	polr1d	77	82.000	ENSGAGG00000008503	POLR1D	88	82.000	Gopherus_agassizii
ENSXCOG00000011731	polr1d	75	75.510	ENSGGOG00000004235	POLR1D	74	75.510	Gorilla_gorilla
ENSXCOG00000011731	polr1d	95	76.190	ENSHBUG00000002111	polr1d	89	88.119	Haplochromis_burtoni
ENSXCOG00000011731	polr1d	75	73.469	ENSHGLG00000003202	POLR1D	74	73.469	Heterocephalus_glaber_female
ENSXCOG00000011731	polr1d	75	73.469	ENSHGLG00100009393	POLR1D	74	73.469	Heterocephalus_glaber_male
ENSXCOG00000011731	polr1d	77	83.000	ENSHCOG00000003258	polr1d	88	83.000	Hippocampus_comes
ENSXCOG00000011731	polr1d	78	83.333	ENSIPUG00000014810	polr1d	89	83.333	Ictalurus_punctatus
ENSXCOG00000011731	polr1d	75	75.510	ENSSTOG00000013877	POLR1D	74	75.510	Ictidomys_tridecemlineatus
ENSXCOG00000011731	polr1d	75	73.469	ENSJJAG00000022671	-	82	73.469	Jaculus_jaculus
ENSXCOG00000011731	polr1d	72	59.574	ENSJJAG00000021667	-	54	59.574	Jaculus_jaculus
ENSXCOG00000011731	polr1d	78	87.129	ENSKMAG00000015256	polr1d	89	87.129	Kryptolebias_marmoratus
ENSXCOG00000011731	polr1d	78	87.129	ENSLBEG00000015919	polr1d	89	87.129	Labrus_bergylta
ENSXCOG00000011731	polr1d	74	71.134	ENSLACG00000006810	POLR1D	81	71.134	Latimeria_chalumnae
ENSXCOG00000011731	polr1d	55	85.915	ENSLOCG00000014976	polr1d	96	85.915	Lepisosteus_oculatus
ENSXCOG00000011731	polr1d	75	75.510	ENSLAFG00000032290	POLR1D	74	75.510	Loxodonta_africana
ENSXCOG00000011731	polr1d	75	75.510	ENSMFAG00000045264	POLR1D	76	75.510	Macaca_fascicularis
ENSXCOG00000011731	polr1d	55	73.611	ENSMMUG00000041570	-	65	73.611	Macaca_mulatta
ENSXCOG00000011731	polr1d	75	75.510	ENSMMUG00000020386	POLR1D	84	75.510	Macaca_mulatta
ENSXCOG00000011731	polr1d	75	60.825	ENSMNEG00000038120	-	70	60.825	Macaca_nemestrina
ENSXCOG00000011731	polr1d	75	75.510	ENSMNEG00000008630	-	74	75.510	Macaca_nemestrina
ENSXCOG00000011731	polr1d	75	67.010	ENSMLEG00000032251	-	71	67.010	Mandrillus_leucophaeus
ENSXCOG00000011731	polr1d	75	75.510	ENSMLEG00000041048	-	74	75.510	Mandrillus_leucophaeus
ENSXCOG00000011731	polr1d	77	90.000	ENSMAMG00000014834	polr1d	93	90.000	Mastacembelus_armatus
ENSXCOG00000011731	polr1d	77	90.000	ENSMZEG00005006638	polr1d	88	90.000	Maylandia_zebra
ENSXCOG00000011731	polr1d	73	77.320	ENSMGAG00000005322	POLR1D	89	77.320	Meleagris_gallopavo
ENSXCOG00000011731	polr1d	75	75.510	ENSMAUG00000001946	Polr1d	74	75.510	Mesocricetus_auratus
ENSXCOG00000011731	polr1d	75	74.490	ENSMICG00000016883	-	74	74.490	Microcebus_murinus
ENSXCOG00000011731	polr1d	75	58.163	ENSMICG00000007349	-	73	58.163	Microcebus_murinus
ENSXCOG00000011731	polr1d	75	74.490	ENSMOCG00000021288	Polr1d	74	74.490	Microtus_ochrogaster
ENSXCOG00000011731	polr1d	78	90.099	ENSMMOG00000009605	polr1d	89	90.099	Mola_mola
ENSXCOG00000011731	polr1d	77	81.000	ENSMODG00000023881	POLR1D	88	81.000	Monodelphis_domestica
ENSXCOG00000011731	polr1d	79	84.466	ENSMALG00000010652	polr1d	90	84.466	Monopterus_albus
ENSXCOG00000011731	polr1d	75	73.469	MGP_CAROLIEiJ_G0028034	Polr1d	74	73.469	Mus_caroli
ENSXCOG00000011731	polr1d	75	73.469	ENSMUSG00000029642	Polr1d	74	73.469	Mus_musculus
ENSXCOG00000011731	polr1d	75	73.469	MGP_PahariEiJ_G0024600	Polr1d	74	73.469	Mus_pahari
ENSXCOG00000011731	polr1d	75	73.469	MGP_SPRETEiJ_G0029032	Polr1d	74	73.469	Mus_spretus
ENSXCOG00000011731	polr1d	75	76.289	ENSMLUG00000027169	-	73	76.289	Myotis_lucifugus
ENSXCOG00000011731	polr1d	75	70.103	ENSMLUG00000004118	-	73	70.103	Myotis_lucifugus
ENSXCOG00000011731	polr1d	75	75.510	ENSNGAG00000006014	Polr1d	84	75.510	Nannospalax_galili
ENSXCOG00000011731	polr1d	78	88.119	ENSNBRG00000020327	polr1d	89	88.119	Neolamprologus_brichardi
ENSXCOG00000011731	polr1d	75	75.510	ENSNLEG00000000358	POLR1D	74	75.510	Nomascus_leucogenys
ENSXCOG00000011731	polr1d	75	62.245	ENSODEG00000014801	-	71	62.245	Octodon_degus
ENSXCOG00000011731	polr1d	75	74.490	ENSODEG00000005294	-	74	74.490	Octodon_degus
ENSXCOG00000011731	polr1d	77	81.000	ENSOANG00000008708	-	93	81.000	Ornithorhynchus_anatinus
ENSXCOG00000011731	polr1d	75	75.510	ENSOCUG00000015706	POLR1D	60	75.510	Oryctolagus_cuniculus
ENSXCOG00000011731	polr1d	85	83.636	ENSORLG00000010257	polr1d	89	87.129	Oryzias_latipes
ENSXCOG00000011731	polr1d	78	88.235	ENSORLG00020000533	polr1d	68	87.129	Oryzias_latipes_hni
ENSXCOG00000011731	polr1d	99	74.242	ENSORLG00015013267	polr1d	67	88.119	Oryzias_latipes_hsok
ENSXCOG00000011731	polr1d	78	88.119	ENSOMEG00000014912	polr1d	67	88.119	Oryzias_melastigma
ENSXCOG00000011731	polr1d	75	76.531	ENSOGAG00000014601	POLR1D	74	76.531	Otolemur_garnettii
ENSXCOG00000011731	polr1d	75	74.490	ENSOARG00000017005	POLR1D	75	74.490	Ovis_aries
ENSXCOG00000011731	polr1d	75	75.510	ENSPPAG00000028138	POLR1D	74	75.510	Pan_paniscus
ENSXCOG00000011731	polr1d	75	75.510	ENSPPRG00000003381	POLR1D	74	75.510	Panthera_pardus
ENSXCOG00000011731	polr1d	75	75.510	ENSPTIG00000018137	POLR1D	74	75.510	Panthera_tigris_altaica
ENSXCOG00000011731	polr1d	75	75.510	ENSPTRG00000005734	POLR1D	74	75.510	Pan_troglodytes
ENSXCOG00000011731	polr1d	75	75.510	ENSPANG00000020259	-	74	75.510	Papio_anubis
ENSXCOG00000011731	polr1d	75	65.979	ENSPANG00000035051	-	71	65.979	Papio_anubis
ENSXCOG00000011731	polr1d	68	82.955	ENSPKIG00000021891	polr1d	90	62.281	Paramormyrops_kingsleyae
ENSXCOG00000011731	polr1d	77	78.000	ENSPSIG00000011822	POLR1D	78	78.000	Pelodiscus_sinensis
ENSXCOG00000011731	polr1d	78	84.158	ENSPMGG00000010359	polr1d	88	84.158	Periophthalmus_magnuspinnatus
ENSXCOG00000011731	polr1d	78	75.248	ENSPMGG00000012998	POLR1D	73	75.248	Periophthalmus_magnuspinnatus
ENSXCOG00000011731	polr1d	75	74.490	ENSPEMG00000006336	-	75	74.490	Peromyscus_maniculatus_bairdii
ENSXCOG00000011731	polr1d	75	60.204	ENSPMAG00000004228	polr1d	81	60.204	Petromyzon_marinus
ENSXCOG00000011731	polr1d	77	81.000	ENSPCIG00000001673	POLR1D	88	81.000	Phascolarctos_cinereus
ENSXCOG00000011731	polr1d	78	98.020	ENSPFOG00000023343	polr1d	89	98.020	Poecilia_formosa
ENSXCOG00000011731	polr1d	78	98.020	ENSPLAG00000009675	polr1d	89	98.020	Poecilia_latipinna
ENSXCOG00000011731	polr1d	78	98.020	ENSPMEG00000004628	polr1d	89	98.020	Poecilia_mexicana
ENSXCOG00000011731	polr1d	78	98.020	ENSPREG00000022032	polr1d	89	98.020	Poecilia_reticulata
ENSXCOG00000011731	polr1d	75	73.469	ENSPCOG00000028175	POLR1D	74	73.469	Propithecus_coquereli
ENSXCOG00000011731	polr1d	78	88.119	ENSPNYG00000000107	polr1d	89	88.119	Pundamilia_nyererei
ENSXCOG00000011731	polr1d	74	76.042	ENSPNAG00000001512	polr1d	89	72.642	Pygocentrus_nattereri
ENSXCOG00000011731	polr1d	75	73.196	ENSRBIG00000000336	-	73	73.196	Rhinopithecus_bieti
ENSXCOG00000011731	polr1d	75	75.510	ENSRBIG00000036378	-	74	75.510	Rhinopithecus_bieti
ENSXCOG00000011731	polr1d	75	74.227	ENSRROG00000026751	-	73	74.227	Rhinopithecus_roxellana
ENSXCOG00000011731	polr1d	75	75.510	ENSRROG00000042232	-	74	75.510	Rhinopithecus_roxellana
ENSXCOG00000011731	polr1d	66	54.651	YNL113W	RPC19	70	51.515	Saccharomyces_cerevisiae
ENSXCOG00000011731	polr1d	78	68.627	ENSSBOG00000030146	-	75	68.627	Saimiri_boliviensis_boliviensis
ENSXCOG00000011731	polr1d	75	75.510	ENSSBOG00000028482	-	74	75.510	Saimiri_boliviensis_boliviensis
ENSXCOG00000011731	polr1d	77	79.000	ENSSHAG00000001190	POLR1D	78	79.000	Sarcophilus_harrisii
ENSXCOG00000011731	polr1d	78	79.412	ENSSFOG00015011375	polr1d	89	79.412	Scleropages_formosus
ENSXCOG00000011731	polr1d	78	87.129	ENSSMAG00000011861	polr1d	89	87.129	Scophthalmus_maximus
ENSXCOG00000011731	polr1d	78	86.139	ENSSDUG00000011930	polr1d	89	86.139	Seriola_dumerili
ENSXCOG00000011731	polr1d	92	78.151	ENSSLDG00000023871	polr1d	99	78.151	Seriola_lalandi_dorsalis
ENSXCOG00000011731	polr1d	75	75.510	ENSSARG00000007840	POLR1D	74	75.510	Sorex_araneus
ENSXCOG00000011731	polr1d	70	78.022	ENSSPUG00000005786	POLR1D	83	74.227	Sphenodon_punctatus
ENSXCOG00000011731	polr1d	78	89.109	ENSSPAG00000011764	polr1d	89	89.109	Stegastes_partitus
ENSXCOG00000011731	polr1d	78	72.549	ENSSSCG00000009310	POLR1D	77	72.549	Sus_scrofa
ENSXCOG00000011731	polr1d	66	82.558	ENSTGUG00000005450	POLR1D	90	82.558	Taeniopygia_guttata
ENSXCOG00000011731	polr1d	78	84.158	ENSTRUG00000019741	polr1d	89	84.158	Takifugu_rubripes
ENSXCOG00000011731	polr1d	75	75.510	ENSTBEG00000007006	POLR1D	79	75.510	Tupaia_belangeri
ENSXCOG00000011731	polr1d	75	75.510	ENSUAMG00000011413	POLR1D	74	75.510	Ursus_americanus
ENSXCOG00000011731	polr1d	75	75.510	ENSUMAG00000016968	POLR1D	77	75.510	Ursus_maritimus
ENSXCOG00000011731	polr1d	75	75.510	ENSVVUG00000009216	POLR1D	74	75.510	Vulpes_vulpes
ENSXCOG00000011731	polr1d	100	96.923	ENSXMAG00000017538	polr1d	100	96.923	Xiphophorus_maculatus