EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000011741 (Gene tree)
Gene ID: -
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 3
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5083 bases
Position: chrKQ557219.1:19902333-19907415
Accession: ZDB-GENE-040426-1997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000015525	Suf	PF05843.14	3.3e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000015718	-	1866	-	ENSXCOP00000015525	621 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000011741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011741's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000011741	cstf3	100	90.400	ENSG00000176102	CSTF3	87	90.400	Homo_sapiens
ENSXCOG00000011741	cstf3	100	96.950	ENSAPOG00000014054	cstf3	87	96.950	Acanthochromis_polyacanthus
ENSXCOG00000011741	cstf3	100	90.240	ENSAMEG00000007187	CSTF3	87	90.240	Ailuropoda_melanoleuca
ENSXCOG00000011741	cstf3	100	92.432	ENSACIG00000005539	cstf3	100	92.432	Amphilophus_citrinellus
ENSXCOG00000011741	cstf3	100	96.790	ENSAOCG00000010930	cstf3	87	96.790	Amphiprion_ocellaris
ENSXCOG00000011741	cstf3	100	96.790	ENSAPEG00000007903	cstf3	87	96.790	Amphiprion_percula
ENSXCOG00000011741	cstf3	100	96.950	ENSATEG00000000190	cstf3	87	96.950	Anabas_testudineus
ENSXCOG00000011741	cstf3	100	90.400	ENSAPLG00000007217	CSTF3	88	90.400	Anas_platyrhynchos
ENSXCOG00000011741	cstf3	100	90.720	ENSACAG00000002823	CSTF3	87	90.720	Anolis_carolinensis
ENSXCOG00000011741	cstf3	100	90.400	ENSANAG00000020699	CSTF3	100	90.400	Aotus_nancymaae
ENSXCOG00000011741	cstf3	100	96.469	ENSACLG00000007820	cstf3	88	96.469	Astatotilapia_calliptera
ENSXCOG00000011741	cstf3	100	93.429	ENSAMXG00000014198	cstf3	87	93.429	Astyanax_mexicanus
ENSXCOG00000011741	cstf3	100	90.400	ENSBTAG00000008617	CSTF3	93	90.400	Bos_taurus
ENSXCOG00000011741	cstf3	99	47.273	WBGene00006307	suf-1	89	47.273	Caenorhabditis_elegans
ENSXCOG00000011741	cstf3	100	90.400	ENSCJAG00000005533	CSTF3	100	90.400	Callithrix_jacchus
ENSXCOG00000011741	cstf3	100	90.400	ENSCAFG00000007264	CSTF3	87	90.400	Canis_familiaris
ENSXCOG00000011741	cstf3	100	90.400	ENSCAFG00020002715	CSTF3	89	90.400	Canis_lupus_dingo
ENSXCOG00000011741	cstf3	100	90.400	ENSCHIG00000016418	CSTF3	100	90.400	Capra_hircus
ENSXCOG00000011741	cstf3	100	90.720	ENSTSYG00000000451	CSTF3	100	90.720	Carlito_syrichta
ENSXCOG00000011741	cstf3	90	90.649	ENSCAPG00000010958	CSTF3	93	90.649	Cavia_aperea
ENSXCOG00000011741	cstf3	100	90.400	ENSCPOG00000005545	CSTF3	88	90.400	Cavia_porcellus
ENSXCOG00000011741	cstf3	100	90.400	ENSCCAG00000024790	CSTF3	100	90.400	Cebus_capucinus
ENSXCOG00000011741	cstf3	100	90.400	ENSCATG00000007080	CSTF3	100	90.400	Cercocebus_atys
ENSXCOG00000011741	cstf3	100	90.400	ENSCLAG00000016179	CSTF3	87	90.400	Chinchilla_lanigera
ENSXCOG00000011741	cstf3	76	97.268	ENSCHOG00000002497	CSTF3	67	97.268	Choloepus_hoffmanni
ENSXCOG00000011741	cstf3	100	90.400	ENSCPBG00000006753	CSTF3	87	90.400	Chrysemys_picta_bellii
ENSXCOG00000011741	cstf3	100	62.520	ENSCING00000006401	-	87	62.520	Ciona_intestinalis
ENSXCOG00000011741	cstf3	100	60.952	ENSCSAVG00000004851	-	89	60.952	Ciona_savignyi
ENSXCOG00000011741	cstf3	100	90.400	ENSCANG00000035468	CSTF3	100	90.400	Colobus_angolensis_palliatus
ENSXCOG00000011741	cstf3	100	90.240	ENSCGRG00001014773	Cstf3	87	90.240	Cricetulus_griseus_chok1gshd
ENSXCOG00000011741	cstf3	100	90.240	ENSCGRG00000004142	Cstf3	87	90.240	Cricetulus_griseus_crigri
ENSXCOG00000011741	cstf3	100	95.666	ENSCSEG00000014283	cstf3	87	95.666	Cynoglossus_semilaevis
ENSXCOG00000011741	cstf3	100	98.555	ENSCVAG00000019739	cstf3	87	98.555	Cyprinodon_variegatus
ENSXCOG00000011741	cstf3	100	93.429	ENSDARG00000018904	cstf3	87	93.429	Danio_rerio
ENSXCOG00000011741	cstf3	100	90.400	ENSDNOG00000007366	CSTF3	87	90.400	Dasypus_novemcinctus
ENSXCOG00000011741	cstf3	100	83.520	ENSDORG00000005898	Cstf3	87	83.520	Dipodomys_ordii
ENSXCOG00000011741	cstf3	99	57.524	FBgn0003559	su(f)	87	57.524	Drosophila_melanogaster
ENSXCOG00000011741	cstf3	96	89.632	ENSETEG00000017097	CSTF3	83	89.632	Echinops_telfairi
ENSXCOG00000011741	cstf3	86	74.302	ENSEBUG00000015459	cstf3	86	74.302	Eptatretus_burgeri
ENSXCOG00000011741	cstf3	100	90.400	ENSEASG00005019884	CSTF3	89	90.400	Equus_asinus_asinus
ENSXCOG00000011741	cstf3	100	90.400	ENSECAG00000023338	CSTF3	89	90.400	Equus_caballus
ENSXCOG00000011741	cstf3	100	84.640	ENSEEUG00000015167	CSTF3	87	84.640	Erinaceus_europaeus
ENSXCOG00000011741	cstf3	100	94.071	ENSELUG00000023393	cstf3	87	94.071	Esox_lucius
ENSXCOG00000011741	cstf3	100	90.560	ENSFCAG00000030711	CSTF3	87	90.560	Felis_catus
ENSXCOG00000011741	cstf3	100	90.080	ENSFALG00000010764	CSTF3	96	90.080	Ficedula_albicollis
ENSXCOG00000011741	cstf3	100	90.560	ENSFDAG00000012082	CSTF3	87	90.560	Fukomys_damarensis
ENSXCOG00000011741	cstf3	100	98.074	ENSFHEG00000020623	cstf3	87	98.074	Fundulus_heteroclitus
ENSXCOG00000011741	cstf3	100	93.440	ENSGMOG00000012275	cstf3	87	93.440	Gadus_morhua
ENSXCOG00000011741	cstf3	100	90.400	ENSGALG00000011685	CSTF3	87	90.400	Gallus_gallus
ENSXCOG00000011741	cstf3	100	99.037	ENSGAFG00000002181	cstf3	87	99.037	Gambusia_affinis
ENSXCOG00000011741	cstf3	100	95.666	ENSGACG00000015997	cstf3	87	95.666	Gasterosteus_aculeatus
ENSXCOG00000011741	cstf3	100	90.400	ENSGAGG00000006200	CSTF3	87	90.400	Gopherus_agassizii
ENSXCOG00000011741	cstf3	100	85.600	ENSGGOG00000026591	CSTF3	89	85.600	Gorilla_gorilla
ENSXCOG00000011741	cstf3	100	96.629	ENSHBUG00000016656	cstf3	88	96.629	Haplochromis_burtoni
ENSXCOG00000011741	cstf3	100	90.400	ENSHGLG00000017834	CSTF3	87	90.400	Heterocephalus_glaber_female
ENSXCOG00000011741	cstf3	100	90.400	ENSHGLG00100018042	CSTF3	88	90.400	Heterocephalus_glaber_male
ENSXCOG00000011741	cstf3	100	93.740	ENSHCOG00000015218	cstf3	88	93.740	Hippocampus_comes
ENSXCOG00000011741	cstf3	100	92.788	ENSIPUG00000013170	CSTF3	88	92.788	Ictalurus_punctatus
ENSXCOG00000011741	cstf3	100	90.400	ENSSTOG00000013306	CSTF3	87	90.400	Ictidomys_tridecemlineatus
ENSXCOG00000011741	cstf3	100	78.880	ENSJJAG00000018430	Cstf3	86	78.880	Jaculus_jaculus
ENSXCOG00000011741	cstf3	100	95.345	ENSKMAG00000010916	cstf3	87	95.345	Kryptolebias_marmoratus
ENSXCOG00000011741	cstf3	100	95.345	ENSLBEG00000002306	cstf3	87	95.345	Labrus_bergylta
ENSXCOG00000011741	cstf3	100	89.423	ENSLACG00000017296	CSTF3	87	89.423	Latimeria_chalumnae
ENSXCOG00000011741	cstf3	100	93.600	ENSLOCG00000004415	cstf3	87	93.600	Lepisosteus_oculatus
ENSXCOG00000011741	cstf3	100	90.400	ENSLAFG00000008712	CSTF3	87	90.400	Loxodonta_africana
ENSXCOG00000011741	cstf3	100	90.400	ENSMFAG00000029516	CSTF3	100	90.400	Macaca_fascicularis
ENSXCOG00000011741	cstf3	100	90.400	ENSMMUG00000002542	CSTF3	87	90.400	Macaca_mulatta
ENSXCOG00000011741	cstf3	100	90.400	ENSMNEG00000021807	CSTF3	100	90.400	Macaca_nemestrina
ENSXCOG00000011741	cstf3	100	90.400	ENSMLEG00000039594	CSTF3	100	90.400	Mandrillus_leucophaeus
ENSXCOG00000011741	cstf3	100	96.308	ENSMAMG00000020423	cstf3	88	96.308	Mastacembelus_armatus
ENSXCOG00000011741	cstf3	100	96.469	ENSMZEG00005012082	cstf3	89	96.469	Maylandia_zebra
ENSXCOG00000011741	cstf3	100	90.400	ENSMGAG00000001383	CSTF3	88	89.968	Meleagris_gallopavo
ENSXCOG00000011741	cstf3	100	90.080	ENSMAUG00000002487	Cstf3	87	90.080	Mesocricetus_auratus
ENSXCOG00000011741	cstf3	100	90.400	ENSMICG00000004784	CSTF3	100	90.400	Microcebus_murinus
ENSXCOG00000011741	cstf3	100	90.240	ENSMOCG00000017583	Cstf3	87	90.240	Microtus_ochrogaster
ENSXCOG00000011741	cstf3	100	95.987	ENSMMOG00000016026	cstf3	83	95.987	Mola_mola
ENSXCOG00000011741	cstf3	100	90.400	ENSMODG00000009745	-	87	90.400	Monodelphis_domestica
ENSXCOG00000011741	cstf3	100	80.480	ENSMODG00000025205	-	87	80.480	Monodelphis_domestica
ENSXCOG00000011741	cstf3	100	96.469	ENSMALG00000012050	cstf3	87	96.469	Monopterus_albus
ENSXCOG00000011741	cstf3	100	90.240	MGP_CAROLIEiJ_G0024026	Cstf3	87	90.240	Mus_caroli
ENSXCOG00000011741	cstf3	100	90.240	ENSMUSG00000027176	Cstf3	87	90.240	Mus_musculus
ENSXCOG00000011741	cstf3	100	90.240	MGP_PahariEiJ_G0025464	Cstf3	87	90.240	Mus_pahari
ENSXCOG00000011741	cstf3	100	90.240	MGP_SPRETEiJ_G0024939	Cstf3	87	90.240	Mus_spretus
ENSXCOG00000011741	cstf3	100	90.240	ENSMPUG00000011457	CSTF3	87	90.240	Mustela_putorius_furo
ENSXCOG00000011741	cstf3	100	90.400	ENSMLUG00000003073	-	87	90.400	Myotis_lucifugus
ENSXCOG00000011741	cstf3	100	87.840	ENSMLUG00000026022	-	87	87.840	Myotis_lucifugus
ENSXCOG00000011741	cstf3	100	90.240	ENSNGAG00000010677	Cstf3	88	90.240	Nannospalax_galili
ENSXCOG00000011741	cstf3	100	96.469	ENSNBRG00000007345	cstf3	100	96.469	Neolamprologus_brichardi
ENSXCOG00000011741	cstf3	100	90.400	ENSNLEG00000017901	CSTF3	100	90.400	Nomascus_leucogenys
ENSXCOG00000011741	cstf3	81	89.723	ENSMEUG00000005640	-	97	89.723	Notamacropus_eugenii
ENSXCOG00000011741	cstf3	65	83.624	ENSOPRG00000000199	-	56	83.624	Ochotona_princeps
ENSXCOG00000011741	cstf3	100	90.560	ENSODEG00000016737	-	89	90.560	Octodon_degus
ENSXCOG00000011741	cstf3	99	80.484	ENSODEG00000006311	-	95	80.484	Octodon_degus
ENSXCOG00000011741	cstf3	100	96.469	ENSONIG00000005563	cstf3	87	96.469	Oreochromis_niloticus
ENSXCOG00000011741	cstf3	100	90.271	ENSOANG00000015140	CSTF3	96	90.271	Ornithorhynchus_anatinus
ENSXCOG00000011741	cstf3	100	90.240	ENSOCUG00000015417	CSTF3	87	90.240	Oryctolagus_cuniculus
ENSXCOG00000011741	cstf3	100	95.506	ENSORLG00000009762	cstf3	87	95.506	Oryzias_latipes
ENSXCOG00000011741	cstf3	100	95.506	ENSORLG00020005540	cstf3	88	95.506	Oryzias_latipes_hni
ENSXCOG00000011741	cstf3	100	95.345	ENSORLG00015003551	cstf3	89	95.345	Oryzias_latipes_hsok
ENSXCOG00000011741	cstf3	100	96.148	ENSOMEG00000003848	cstf3	91	96.148	Oryzias_melastigma
ENSXCOG00000011741	cstf3	100	89.809	ENSOGAG00000010229	CSTF3	87	89.809	Otolemur_garnettii
ENSXCOG00000011741	cstf3	100	90.400	ENSOARG00000017271	CSTF3	96	90.400	Ovis_aries
ENSXCOG00000011741	cstf3	100	88.320	ENSPPAG00000027358	CSTF3	89	88.320	Pan_paniscus
ENSXCOG00000011741	cstf3	100	90.560	ENSPPRG00000016852	CSTF3	87	90.560	Panthera_pardus
ENSXCOG00000011741	cstf3	100	90.560	ENSPTIG00000008716	CSTF3	87	90.560	Panthera_tigris_altaica
ENSXCOG00000011741	cstf3	100	90.400	ENSPTRG00000003485	CSTF3	89	88.640	Pan_troglodytes
ENSXCOG00000011741	cstf3	100	90.400	ENSPANG00000013722	CSTF3	88	90.400	Papio_anubis
ENSXCOG00000011741	cstf3	100	93.429	ENSPKIG00000023648	cstf3	87	93.429	Paramormyrops_kingsleyae
ENSXCOG00000011741	cstf3	100	90.400	ENSPSIG00000009173	CSTF3	87	90.400	Pelodiscus_sinensis
ENSXCOG00000011741	cstf3	73	98.022	ENSPMGG00000000164	cstf3	83	98.022	Periophthalmus_magnuspinnatus
ENSXCOG00000011741	cstf3	100	90.080	ENSPEMG00000011481	Cstf3	87	90.080	Peromyscus_maniculatus_bairdii
ENSXCOG00000011741	cstf3	100	79.745	ENSPMAG00000007282	cstf3	87	79.936	Petromyzon_marinus
ENSXCOG00000011741	cstf3	100	90.880	ENSPCIG00000026406	-	100	90.880	Phascolarctos_cinereus
ENSXCOG00000011741	cstf3	100	75.879	ENSPCIG00000030419	-	78	76.198	Phascolarctos_cinereus
ENSXCOG00000011741	cstf3	100	99.037	ENSPFOG00000017239	cstf3	87	99.037	Poecilia_formosa
ENSXCOG00000011741	cstf3	100	99.037	ENSPLAG00000009456	cstf3	87	99.037	Poecilia_latipinna
ENSXCOG00000011741	cstf3	100	99.037	ENSPMEG00000010320	cstf3	87	99.037	Poecilia_mexicana
ENSXCOG00000011741	cstf3	100	98.876	ENSPREG00000013549	cstf3	88	98.876	Poecilia_reticulata
ENSXCOG00000011741	cstf3	100	90.400	ENSPPYG00000003375	CSTF3	87	90.400	Pongo_abelii
ENSXCOG00000011741	cstf3	66	96.154	ENSPCAG00000008025	-	58	96.154	Procavia_capensis
ENSXCOG00000011741	cstf3	100	86.400	ENSPCOG00000014417	CSTF3	88	86.400	Propithecus_coquereli
ENSXCOG00000011741	cstf3	100	86.240	ENSPVAG00000002350	CSTF3	87	86.240	Pteropus_vampyrus
ENSXCOG00000011741	cstf3	100	96.629	ENSPNYG00000018259	cstf3	89	96.629	Pundamilia_nyererei
ENSXCOG00000011741	cstf3	100	94.071	ENSPNAG00000020182	cstf3	100	86.378	Pygocentrus_nattereri
ENSXCOG00000011741	cstf3	100	89.920	ENSRNOG00000012089	Cstf3	100	89.920	Rattus_norvegicus
ENSXCOG00000011741	cstf3	100	90.400	ENSRBIG00000044258	CSTF3	100	90.400	Rhinopithecus_bieti
ENSXCOG00000011741	cstf3	100	90.400	ENSRROG00000043450	CSTF3	100	90.400	Rhinopithecus_roxellana
ENSXCOG00000011741	cstf3	100	90.400	ENSSBOG00000024764	CSTF3	100	90.400	Saimiri_boliviensis_boliviensis
ENSXCOG00000011741	cstf3	100	81.600	ENSSHAG00000003135	-	86	81.600	Sarcophilus_harrisii
ENSXCOG00000011741	cstf3	100	90.720	ENSSHAG00000018128	-	87	90.720	Sarcophilus_harrisii
ENSXCOG00000011741	cstf3	100	93.590	ENSSFOG00015022133	cstf3	87	93.590	Scleropages_formosus
ENSXCOG00000011741	cstf3	100	95.827	ENSSMAG00000002197	cstf3	87	95.827	Scophthalmus_maximus
ENSXCOG00000011741	cstf3	100	96.790	ENSSDUG00000020426	cstf3	87	96.790	Seriola_dumerili
ENSXCOG00000011741	cstf3	100	96.950	ENSSLDG00000025649	cstf3	91	96.950	Seriola_lalandi_dorsalis
ENSXCOG00000011741	cstf3	100	90.080	ENSSARG00000000391	CSTF3	87	90.080	Sorex_araneus
ENSXCOG00000011741	cstf3	100	89.760	ENSSPUG00000010546	CSTF3	90	89.760	Sphenodon_punctatus
ENSXCOG00000011741	cstf3	100	96.790	ENSSPAG00000004958	cstf3	87	96.790	Stegastes_partitus
ENSXCOG00000011741	cstf3	100	90.240	ENSSSCG00000040954	CSTF3	87	90.240	Sus_scrofa
ENSXCOG00000011741	cstf3	100	90.080	ENSTGUG00000005010	CSTF3	88	90.080	Taeniopygia_guttata
ENSXCOG00000011741	cstf3	100	95.666	ENSTRUG00000004959	cstf3	90	93.098	Takifugu_rubripes
ENSXCOG00000011741	cstf3	100	95.987	ENSTNIG00000013811	cstf3	87	95.987	Tetraodon_nigroviridis
ENSXCOG00000011741	cstf3	100	87.680	ENSTBEG00000001544	CSTF3	88	87.680	Tupaia_belangeri
ENSXCOG00000011741	cstf3	100	87.200	ENSTTRG00000016366	CSTF3	87	87.200	Tursiops_truncatus
ENSXCOG00000011741	cstf3	100	90.080	ENSUMAG00000018971	CSTF3	100	90.080	Ursus_maritimus
ENSXCOG00000011741	cstf3	100	90.240	ENSVPAG00000007800	CSTF3	87	90.240	Vicugna_pacos
ENSXCOG00000011741	cstf3	100	90.400	ENSVVUG00000014938	CSTF3	100	90.400	Vulpes_vulpes
ENSXCOG00000011741	cstf3	97	75.772	ENSXETG00000021399	cstf3	99	75.777	Xenopus_tropicalis
ENSXCOG00000011741	cstf3	63	34.761	ENSXETG00000017946	-	82	34.761	Xenopus_tropicalis
ENSXCOG00000011741	cstf3	100	99.518	ENSXMAG00000009545	cstf3	87	99.518	Xiphophorus_maculatus