EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000011765 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
11365 bases
Position
chrKQ557204.1:31615925-31627289
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000015565KH_1PF00013.293.5e-6414
ENSXCOP00000015565KH_1PF00013.293.5e-6424
ENSXCOP00000015565KH_1PF00013.293.5e-6434
ENSXCOP00000015565KH_1PF00013.293.5e-6444
ENSXCOP00000015567KH_1PF00013.291.7e-6114
ENSXCOP00000015567KH_1PF00013.291.7e-6124
ENSXCOP00000015567KH_1PF00013.291.7e-6134
ENSXCOP00000015567KH_1PF00013.291.7e-6144
ENSXCOP00000015567KH_2PF07650.173.8e-2111
ENSXCOP00000015565KH_2PF07650.173.6e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000015758-1524-ENSXCOP00000015565507 (aa)--
ENSXCOT00000015760-1389-ENSXCOP00000015567462 (aa)--
Gene Model
Click here to download ENSXCOG00000011765's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011765's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000011765-9657.089ENSXCOG00000002806FUBP39657.089
ENSXCOG00000011765-8147.072ENSXCOG00000014443khsrp8142.370
ENSXCOG00000011765-8453.472ENSXCOG00000019354fubp18249.116
ENSXCOG00000011765-6930.000ENSXCOG00000020481pcbp38730.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000011765-8466.219ENSG00000107164FUBP39259.023Homo_sapiens
ENSXCOG00000011765-9776.164ENSAPOG00000018241-9975.605Acanthochromis_polyacanthus
ENSXCOG00000011765-9655.636ENSAPOG00000016135fubp39856.000Acanthochromis_polyacanthus
ENSXCOG00000011765-9559.962ENSAMEG00000016193FUBP39159.962Ailuropoda_melanoleuca
ENSXCOG00000011765-9359.063ENSACIG00000019595fubp39059.674Amphilophus_citrinellus
ENSXCOG00000011765-9781.349ENSACIG00000005212-8881.349Amphilophus_citrinellus
ENSXCOG00000011765-9775.978ENSAOCG00000008429-9975.419Amphiprion_ocellaris
ENSXCOG00000011765-9655.636ENSAOCG00000015110fubp39856.000Amphiprion_ocellaris
ENSXCOG00000011765-9656.182ENSAPEG00000015125fubp39856.545Amphiprion_percula
ENSXCOG00000011765-9775.978ENSAPEG00000022868-9975.419Amphiprion_percula
ENSXCOG00000011765-9654.463ENSATEG00000018030fubp39755.009Anabas_testudineus
ENSXCOG00000011765-9775.786ENSATEG00000014618-9775.786Anabas_testudineus
ENSXCOG00000011765-9357.469ENSAPLG00000011238FUBP38959.881Anas_platyrhynchos
ENSXCOG00000011765-9559.777ENSANAG00000022905FUBP39759.777Aotus_nancymaae
ENSXCOG00000011765-9774.954ENSACLG00000007655-9974.397Astatotilapia_calliptera
ENSXCOG00000011765-8163.594ENSACLG00000011819fubp37164.286Astatotilapia_calliptera
ENSXCOG00000011765-9860.886ENSAMXG00000008318fubp39461.439Astyanax_mexicanus
ENSXCOG00000011765-8667.035ENSBTAG00000013072FUBP39459.116Bos_taurus
ENSXCOG00000011765-9559.777ENSCJAG00000020542FUBP39759.777Callithrix_jacchus
ENSXCOG00000011765-9560.588ENSCAFG00000019942FUBP39365.359Canis_familiaris
ENSXCOG00000011765-9561.509ENSCAFG00020024002FUBP39761.509Canis_lupus_dingo
ENSXCOG00000011765-9561.017ENSCHIG00000027228FUBP39561.017Capra_hircus
ENSXCOG00000011765-7662.535ENSTSYG00000028199FUBP39057.403Carlito_syrichta
ENSXCOG00000011765-8463.357ENSCAPG00000007144FUBP39358.333Cavia_aperea
ENSXCOG00000011765-8665.142ENSCPOG00000010315FUBP39958.140Cavia_porcellus
ENSXCOG00000011765-8466.741ENSCCAG00000036313FUBP39259.475Cebus_capucinus
ENSXCOG00000011765-8462.500ENSCATG00000015864FUBP39255.910Cercocebus_atys
ENSXCOG00000011765-9559.184ENSCLAG00000009005FUBP39957.364Chinchilla_lanigera
ENSXCOG00000011765-8466.219ENSCSAG00000014748FUBP39259.023Chlorocebus_sabaeus
ENSXCOG00000011765-6776.119ENSCHOG00000010987FUBP36276.119Choloepus_hoffmanni
ENSXCOG00000011765-9463.299ENSCPBG00000022635FUBP39760.150Chrysemys_picta_bellii
ENSXCOG00000011765-8466.295ENSCANG00000042975FUBP39259.099Colobus_angolensis_palliatus
ENSXCOG00000011765-8067.757ENSCGRG00001011076Fubp39458.470Cricetulus_griseus_chok1gshd
ENSXCOG00000011765-8067.056ENSCGRG00000001872Fubp39955.039Cricetulus_griseus_crigri
ENSXCOG00000011765-9775.279ENSCSEG00000008761-9975.279Cynoglossus_semilaevis
ENSXCOG00000011765-9555.249ENSCSEG00000017815FUBP39655.985Cynoglossus_semilaevis
ENSXCOG00000011765-8164.720ENSCVAG00000017181FUBP37664.583Cyprinodon_variegatus
ENSXCOG00000011765-8877.462ENSCVAG00000006510-9395.752Cyprinodon_variegatus
ENSXCOG00000011765-9860.773ENSDARG00000086896fubp39560.958Danio_rerio
ENSXCOG00000011765-8659.783ENSDNOG00000014533FUBP38960.479Dasypus_novemcinctus
ENSXCOG00000011765-7681.818ENSETEG00000008842FUBP36581.818Echinops_telfairi
ENSXCOG00000011765-9563.527ENSEASG00005008416FUBP39958.467Equus_asinus_asinus
ENSXCOG00000011765-9563.527ENSECAG00000011500FUBP39063.527Equus_caballus
ENSXCOG00000011765-8462.864ENSEEUG00000000550FUBP37762.864Erinaceus_europaeus
ENSXCOG00000011765-9764.391ENSELUG00000009949-9864.760Esox_lucius
ENSXCOG00000011765-9861.455ENSELUG00000013808fubp39464.516Esox_lucius
ENSXCOG00000011765-9559.811ENSFCAG00000005113FUBP39458.333Felis_catus
ENSXCOG00000011765-8664.059ENSFALG00000001444FUBP39166.667Ficedula_albicollis
ENSXCOG00000011765-9556.944ENSFDAG00000013466FUBP39263.368Fukomys_damarensis
ENSXCOG00000011765-9656.742ENSFHEG00000003957fubp39756.691Fundulus_heteroclitus
ENSXCOG00000011765-7187.719ENSFHEG00000006558-8587.719Fundulus_heteroclitus
ENSXCOG00000011765-8786.207ENSGMOG00000002653FUBP38686.207Gadus_morhua
ENSXCOG00000011765-8160.698ENSGMOG00000017047-7461.395Gadus_morhua
ENSXCOG00000011765-9562.475ENSGALG00000003941FUBP39760.150Gallus_gallus
ENSXCOG00000011765-9770.881ENSGAFG00000019255-9974.904Gambusia_affinis
ENSXCOG00000011765-9656.391ENSGAFG00000010840FUBP39756.343Gambusia_affinis
ENSXCOG00000011765-9556.144ENSGACG00000016704fubp39655.495Gasterosteus_aculeatus
ENSXCOG00000011765-9758.970ENSGACG00000000957-9858.792Gasterosteus_aculeatus
ENSXCOG00000011765-9562.823ENSGAGG00000014090FUBP39760.681Gopherus_agassizii
ENSXCOG00000011765-8466.443ENSGGOG00000011318FUBP39259.211Gorilla_gorilla
ENSXCOG00000011765-9382.692ENSHBUG00000022475-9182.692Haplochromis_burtoni
ENSXCOG00000011765-8163.594ENSHBUG00000022849fubp37764.286Haplochromis_burtoni
ENSXCOG00000011765-9053.891ENSHGLG00000014728-8854.438Heterocephalus_glaber_female
ENSXCOG00000011765-9556.383ENSHGLG00000014381-9957.364Heterocephalus_glaber_female
ENSXCOG00000011765-9657.714ENSHCOG00000003639FUBP39357.714Hippocampus_comes
ENSXCOG00000011765-9769.274ENSHCOG00000021170-9871.078Hippocampus_comes
ENSXCOG00000011765-9759.341ENSIPUG00000019400FUBP39758.741Ictalurus_punctatus
ENSXCOG00000011765-8665.577ENSSTOG00000014105FUBP39957.364Ictidomys_tridecemlineatus
ENSXCOG00000011765-8463.593ENSJJAG00000009992Fubp39260.479Jaculus_jaculus
ENSXCOG00000011765-9779.223ENSKMAG00000021164-9978.244Kryptolebias_marmoratus
ENSXCOG00000011765-9652.684ENSKMAG00000016886fubp39552.816Kryptolebias_marmoratus
ENSXCOG00000011765-9776.199ENSLBEG00000007845-9975.646Labrus_bergylta
ENSXCOG00000011765-9656.564ENSLBEG00000017826FUBP39857.143Labrus_bergylta
ENSXCOG00000011765-9562.891ENSLACG00000017619FUBP39262.963Latimeria_chalumnae
ENSXCOG00000011765-9856.159ENSLOCG00000005411fubp39457.895Lepisosteus_oculatus
ENSXCOG00000011765-8665.577ENSLAFG00000011611FUBP39160.484Loxodonta_africana
ENSXCOG00000011765-8466.295ENSMFAG00000038309FUBP39259.099Macaca_fascicularis
ENSXCOG00000011765-8466.219ENSMMUG00000008249FUBP39259.023Macaca_mulatta
ENSXCOG00000011765-8466.295ENSMNEG00000039622FUBP39259.099Macaca_nemestrina
ENSXCOG00000011765-8263.747ENSMLEG00000037030FUBP39159.677Mandrillus_leucophaeus
ENSXCOG00000011765-9655.373ENSMAMG00000013259fubp39755.373Mastacembelus_armatus
ENSXCOG00000011765-9776.967ENSMAMG00000019009-9677.735Mastacembelus_armatus
ENSXCOG00000011765-9774.583ENSMZEG00005000329-9974.026Maylandia_zebra
ENSXCOG00000011765-9457.692ENSMGAG00000005342FUBP39760.636Meleagris_gallopavo
ENSXCOG00000011765-8067.757ENSMAUG00000012513Fubp39957.364Mesocricetus_auratus
ENSXCOG00000011765-9557.974ENSMICG00000034044-9260.714Microcebus_murinus
ENSXCOG00000011765-9561.132ENSMICG00000015452-9761.132Microcebus_murinus
ENSXCOG00000011765-8466.741ENSMOCG00000005635Fubp39958.462Microtus_ochrogaster
ENSXCOG00000011765-9877.863ENSMMOG00000020809-9877.863Mola_mola
ENSXCOG00000011765-9658.465ENSMMOG00000000105FUBP39660.159Mola_mola
ENSXCOG00000011765-9759.669ENSMODG00000012105FUBP39459.669Monodelphis_domestica
ENSXCOG00000011765-9656.926ENSMALG00000021819FUBP39756.147Monopterus_albus
ENSXCOG00000011765-9774.674ENSMALG00000002993-9973.929Monopterus_albus
ENSXCOG00000011765-9559.168MGP_CAROLIEiJ_G0023413Fubp39674.317Mus_caroli
ENSXCOG00000011765-9559.168ENSMUSG00000026843Fubp39674.317Mus_musculus
ENSXCOG00000011765-9558.790MGP_PahariEiJ_G0024870Fubp39673.224Mus_pahari
ENSXCOG00000011765-9559.168MGP_SPRETEiJ_G0024330Fubp39674.317Mus_spretus
ENSXCOG00000011765-8666.231ENSMPUG00000012692FUBP39260.150Mustela_putorius_furo
ENSXCOG00000011765-8663.420ENSMLUG00000008743FUBP39157.757Myotis_lucifugus
ENSXCOG00000011765-9758.965ENSNGAG00000016562Fubp39957.364Nannospalax_galili
ENSXCOG00000011765-9966.788ENSNBRG00000024313-9866.606Neolamprologus_brichardi
ENSXCOG00000011765-8062.821ENSNBRG00000006751FUBP37063.918Neolamprologus_brichardi
ENSXCOG00000011765-8465.996ENSNLEG00000012523FUBP39959.057Nomascus_leucogenys
ENSXCOG00000011765-8468.323ENSMEUG00000007862FUBP38153.728Notamacropus_eugenii
ENSXCOG00000011765-9159.695ENSOPRG00000008648FUBP38462.092Ochotona_princeps
ENSXCOG00000011765-9453.024ENSONIG00000002861fubp39056.162Oreochromis_niloticus
ENSXCOG00000011765-9969.948ENSONIG00000000666-9969.948Oreochromis_niloticus
ENSXCOG00000011765-9457.980ENSOANG00000001042FUBP39265.688Ornithorhynchus_anatinus
ENSXCOG00000011765-8063.140ENSOCUG00000006183FUBP38763.140Oryctolagus_cuniculus
ENSXCOG00000011765-9673.832ENSORLG00000017565-9974.291Oryzias_latipes
ENSXCOG00000011765-9654.909ENSORLG00000007103fubp39754.909Oryzias_latipes
ENSXCOG00000011765-9577.583ENSORLG00020013143-9978.656Oryzias_latipes_hni
ENSXCOG00000011765-9654.909ENSORLG00020019624fubp39754.909Oryzias_latipes_hni
ENSXCOG00000011765-9577.583ENSORLG00015003412-9978.656Oryzias_latipes_hsok
ENSXCOG00000011765-9654.909ENSORLG00015007684fubp39754.909Oryzias_latipes_hsok
ENSXCOG00000011765-9575.141ENSOMEG00000007725-9974.480Oryzias_melastigma
ENSXCOG00000011765-9655.861ENSOMEG00000004190fubp39755.861Oryzias_melastigma
ENSXCOG00000011765-8665.359ENSOGAG00000007555FUBP39457.971Otolemur_garnettii
ENSXCOG00000011765-8460.093ENSOARG00000007540FUBP39156.731Ovis_aries
ENSXCOG00000011765-8466.219ENSPPAG00000011103FUBP39259.023Pan_paniscus
ENSXCOG00000011765-9457.490ENSPPRG00000023251FUBP39359.109Panthera_pardus
ENSXCOG00000011765-9458.058ENSPTIG00000019979FUBP39861.983Panthera_tigris_altaica
ENSXCOG00000011765-9558.769ENSPTRG00000021474FUBP39759.142Pan_troglodytes
ENSXCOG00000011765-9456.785ENSPTRG00000044650-9560.543Pan_troglodytes
ENSXCOG00000011765-8466.295ENSPANG00000025968FUBP39259.099Papio_anubis
ENSXCOG00000011765-9562.687ENSPKIG00000007267-9462.687Paramormyrops_kingsleyae
ENSXCOG00000011765-9567.807ENSPKIG00000004367fubp39668.675Paramormyrops_kingsleyae
ENSXCOG00000011765-9163.071ENSPSIG00000006734FUBP39162.500Pelodiscus_sinensis
ENSXCOG00000011765-8164.169ENSPMGG00000008874fubp39855.805Periophthalmus_magnuspinnatus
ENSXCOG00000011765-8264.646ENSPMGG00000016496-8363.009Periophthalmus_magnuspinnatus
ENSXCOG00000011765-9556.373ENSPEMG00000019195Fubp39957.364Peromyscus_maniculatus_bairdii
ENSXCOG00000011765-9563.043ENSPCIG00000024114FUBP39760.708Phascolarctos_cinereus
ENSXCOG00000011765-9785.069ENSPFOG00000008400-9985.069Poecilia_formosa
ENSXCOG00000011765-8165.187ENSPFOG00000019842FUBP37665.046Poecilia_formosa
ENSXCOG00000011765-9455.368ENSPLAG00000016612fubp38955.368Poecilia_latipinna
ENSXCOG00000011765-9776.577ENSPLAG00000008443-9976.577Poecilia_latipinna
ENSXCOG00000011765-9481.928ENSPMEG00000014351-9979.395Poecilia_mexicana
ENSXCOG00000011765-9457.782ENSPMEG00000016672FUBP38957.782Poecilia_mexicana
ENSXCOG00000011765-9985.632ENSPREG00000003168-9985.632Poecilia_reticulata
ENSXCOG00000011765-9655.091ENSPREG00000015101FUBP39555.091Poecilia_reticulata
ENSXCOG00000011765-8466.219ENSPPYG00000019693FUBP39259.023Pongo_abelii
ENSXCOG00000011765-8162.326ENSPCAG00000001717FUBP37562.326Procavia_capensis
ENSXCOG00000011765-8666.667ENSPCOG00000022783FUBP39260.456Propithecus_coquereli
ENSXCOG00000011765-8068.692ENSPVAG00000001510FUBP39260.338Pteropus_vampyrus
ENSXCOG00000011765-9878.887ENSPNYG00000013607-9878.887Pundamilia_nyererei
ENSXCOG00000011765-9255.983ENSPNYG00000009567fubp38758.547Pundamilia_nyererei
ENSXCOG00000011765-9864.162ENSPNAG00000013478fubp39464.740Pygocentrus_nattereri
ENSXCOG00000011765-9556.684ENSRNOG00000009139Fubp39259.203Rattus_norvegicus
ENSXCOG00000011765-8466.295ENSRBIG00000042110-9259.099Rhinopithecus_bieti
ENSXCOG00000011765-8264.220ENSRBIG00000030864-9256.579Rhinopithecus_bieti
ENSXCOG00000011765-8466.295ENSRROG00000030006-9259.099Rhinopithecus_roxellana
ENSXCOG00000011765-8463.087ENSRROG00000032640-9256.391Rhinopithecus_roxellana
ENSXCOG00000011765-8448.845ENSSBOG00000021755FUBP39738.920Saimiri_boliviensis_boliviensis
ENSXCOG00000011765-8661.098ENSSHAG00000015689FUBP39363.778Sarcophilus_harrisii
ENSXCOG00000011765-9961.552ENSSFOG00015012455-9662.206Scleropages_formosus
ENSXCOG00000011765-9565.669ENSSFOG00015011098fubp39565.868Scleropages_formosus
ENSXCOG00000011765-9856.481ENSSMAG00000003793FUBP39956.852Scophthalmus_maximus
ENSXCOG00000011765-9776.252ENSSMAG00000017905-9975.605Scophthalmus_maximus
ENSXCOG00000011765-9780.233ENSSDUG00000005975-9972.321Seriola_dumerili
ENSXCOG00000011765-9656.611ENSSDUG00000023495fubp39657.169Seriola_dumerili
ENSXCOG00000011765-9656.343ENSSLDG00000009455FUBP39756.903Seriola_lalandi_dorsalis
ENSXCOG00000011765-9272.931ENSSLDG00000013592-9077.376Seriola_lalandi_dorsalis
ENSXCOG00000011765-9461.782ENSSPUG00000013444FUBP39759.962Sphenodon_punctatus
ENSXCOG00000011765-9655.273ENSSPAG00000018848fubp39755.818Stegastes_partitus
ENSXCOG00000011765-9776.350ENSSPAG00000022405-9975.791Stegastes_partitus
ENSXCOG00000011765-9559.439ENSSSCG00000005702FUBP39165.148Sus_scrofa
ENSXCOG00000011765-9360.777ENSTGUG00000004662FUBP39660.232Taeniopygia_guttata
ENSXCOG00000011765-9778.125ENSTRUG00000013259-9978.125Takifugu_rubripes
ENSXCOG00000011765-9655.347ENSTRUG00000018658fubp39355.910Takifugu_rubripes
ENSXCOG00000011765-9870.318ENSTNIG00000005858-9970.318Tetraodon_nigroviridis
ENSXCOG00000011765-7961.574ENSTNIG00000009019fubp37162.125Tetraodon_nigroviridis
ENSXCOG00000011765-9543.627ENSTTRG00000015138FUBP39245.301Tursiops_truncatus
ENSXCOG00000011765-9561.686ENSUAMG00000009671FUBP39761.686Ursus_americanus
ENSXCOG00000011765-8266.362ENSUMAG00000018745FUBP39465.675Ursus_maritimus
ENSXCOG00000011765-9858.165ENSVVUG00000027641FUBP39958.165Vulpes_vulpes
ENSXCOG00000011765-9561.569ENSXETG00000001344fubp39261.569Xenopus_tropicalis
ENSXCOG00000011765-9656.530ENSXMAG00000005541FUBP39756.530Xiphophorus_maculatus
ENSXCOG00000011765-8893.492ENSXMAG00000000237-10080.414Xiphophorus_maculatus

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