EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000011779 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: si:dkey-85a20.4
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 12507 bases
Position: chrKQ557215.1:11440148-11452654
Accession: ZDB-GENE-090313-347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000015580	SpoU_methylase	PF00588.19	4.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000015773	-	3669	-	ENSXCOP00000015580	1223 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000011779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011779's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000011779	si:dkey-85a20.4	93	48.704	ENSG00000059588	TARBP1	78	48.704	Homo_sapiens
ENSXCOG00000011779	si:dkey-85a20.4	99	77.573	ENSAPOG00000016419	si:dkey-85a20.4	84	77.441	Acanthochromis_polyacanthus
ENSXCOG00000011779	si:dkey-85a20.4	91	48.295	ENSAMEG00000003359	TARBP1	90	48.295	Ailuropoda_melanoleuca
ENSXCOG00000011779	si:dkey-85a20.4	99	74.317	ENSATEG00000020266	si:dkey-85a20.4	82	74.317	Anabas_testudineus
ENSXCOG00000011779	si:dkey-85a20.4	91	51.362	ENSAPLG00000007666	TARBP1	91	51.362	Anas_platyrhynchos
ENSXCOG00000011779	si:dkey-85a20.4	91	47.724	ENSACAG00000001142	TARBP1	80	47.586	Anolis_carolinensis
ENSXCOG00000011779	si:dkey-85a20.4	94	49.116	ENSANAG00000022031	TARBP1	81	49.116	Aotus_nancymaae
ENSXCOG00000011779	si:dkey-85a20.4	93	49.113	ENSBTAG00000004517	TARBP1	75	53.831	Bos_taurus
ENSXCOG00000011779	si:dkey-85a20.4	94	48.840	ENSCJAG00000018155	TARBP1	78	49.046	Callithrix_jacchus
ENSXCOG00000011779	si:dkey-85a20.4	93	49.386	ENSCAFG00000011533	TARBP1	89	49.386	Canis_familiaris
ENSXCOG00000011779	si:dkey-85a20.4	93	49.250	ENSCAFG00020027141	TARBP1	78	49.250	Canis_lupus_dingo
ENSXCOG00000011779	si:dkey-85a20.4	93	48.971	ENSCHIG00000011437	TARBP1	77	48.834	Capra_hircus
ENSXCOG00000011779	si:dkey-85a20.4	87	48.431	ENSTSYG00000010382	TARBP1	88	48.431	Carlito_syrichta
ENSXCOG00000011779	si:dkey-85a20.4	88	46.458	ENSCAPG00000010831	TARBP1	92	46.322	Cavia_aperea
ENSXCOG00000011779	si:dkey-85a20.4	94	48.224	ENSCPOG00000013995	TARBP1	79	48.087	Cavia_porcellus
ENSXCOG00000011779	si:dkey-85a20.4	93	49.116	ENSCCAG00000037278	TARBP1	78	49.116	Cebus_capucinus
ENSXCOG00000011779	si:dkey-85a20.4	97	46.460	ENSCATG00000011754	TARBP1	82	46.460	Cercocebus_atys
ENSXCOG00000011779	si:dkey-85a20.4	86	48.158	ENSCLAG00000003655	TARBP1	87	48.022	Chinchilla_lanigera
ENSXCOG00000011779	si:dkey-85a20.4	86	48.704	ENSCSAG00000010100	TARBP1	90	48.704	Chlorocebus_sabaeus
ENSXCOG00000011779	si:dkey-85a20.4	87	48.250	ENSCPBG00000005587	TARBP1	81	48.250	Chrysemys_picta_bellii
ENSXCOG00000011779	si:dkey-85a20.4	90	49.113	ENSCANG00000034343	TARBP1	90	49.113	Colobus_angolensis_palliatus
ENSXCOG00000011779	si:dkey-85a20.4	97	43.852	ENSCGRG00001016690	Tarbp1	80	48.295	Cricetulus_griseus_chok1gshd
ENSXCOG00000011779	si:dkey-85a20.4	97	43.852	ENSCGRG00000016893	Tarbp1	86	48.295	Cricetulus_griseus_crigri
ENSXCOG00000011779	si:dkey-85a20.4	99	61.712	ENSCSEG00000005255	si:dkey-85a20.4	89	62.005	Cynoglossus_semilaevis
ENSXCOG00000011779	si:dkey-85a20.4	100	51.064	ENSDARG00000079055	si:dkey-85a20.4	97	66.025	Danio_rerio
ENSXCOG00000011779	si:dkey-85a20.4	93	49.729	ENSDNOG00000008637	TARBP1	79	49.660	Dasypus_novemcinctus
ENSXCOG00000011779	si:dkey-85a20.4	87	48.571	ENSDORG00000007984	Tarbp1	91	48.571	Dipodomys_ordii
ENSXCOG00000011779	si:dkey-85a20.4	93	49.386	ENSEASG00005000252	TARBP1	79	49.386	Equus_asinus_asinus
ENSXCOG00000011779	si:dkey-85a20.4	93	49.250	ENSECAG00000023673	TARBP1	78	49.250	Equus_caballus
ENSXCOG00000011779	si:dkey-85a20.4	99	60.614	ENSELUG00000012193	si:dkey-85a20.4	87	60.486	Esox_lucius
ENSXCOG00000011779	si:dkey-85a20.4	93	47.107	ENSFCAG00000014183	TARBP1	77	47.107	Felis_catus
ENSXCOG00000011779	si:dkey-85a20.4	91	50.543	ENSFALG00000013565	TARBP1	98	50.543	Ficedula_albicollis
ENSXCOG00000011779	si:dkey-85a20.4	86	46.509	ENSFDAG00000001308	TARBP1	99	41.398	Fukomys_damarensis
ENSXCOG00000011779	si:dkey-85a20.4	84	80.453	ENSFHEG00000007565	si:dkey-85a20.4	84	80.453	Fundulus_heteroclitus
ENSXCOG00000011779	si:dkey-85a20.4	97	63.165	ENSGMOG00000004549	si:dkey-85a20.4	94	63.165	Gadus_morhua
ENSXCOG00000011779	si:dkey-85a20.4	91	49.863	ENSGALG00000011000	TARBP1	80	49.863	Gallus_gallus
ENSXCOG00000011779	si:dkey-85a20.4	100	87.871	ENSGAFG00000007387	si:dkey-85a20.4	84	87.613	Gambusia_affinis
ENSXCOG00000011779	si:dkey-85a20.4	97	72.543	ENSGACG00000005865	si:dkey-85a20.4	93	72.832	Gasterosteus_aculeatus
ENSXCOG00000011779	si:dkey-85a20.4	91	50.815	ENSGAGG00000012102	TARBP1	81	51.018	Gopherus_agassizii
ENSXCOG00000011779	si:dkey-85a20.4	91	46.648	ENSGGOG00000022879	TARBP1	90	46.648	Gorilla_gorilla
ENSXCOG00000011779	si:dkey-85a20.4	99	77.702	ENSHBUG00000008877	si:dkey-85a20.4	83	77.702	Haplochromis_burtoni
ENSXCOG00000011779	si:dkey-85a20.4	91	47.885	ENSHGLG00000011592	TARBP1	77	47.885	Heterocephalus_glaber_female
ENSXCOG00000011779	si:dkey-85a20.4	91	47.885	ENSHGLG00100015169	TARBP1	85	47.885	Heterocephalus_glaber_male
ENSXCOG00000011779	si:dkey-85a20.4	99	60.828	ENSIPUG00000005249	si:dkey-85a20.4	85	58.460	Ictalurus_punctatus
ENSXCOG00000011779	si:dkey-85a20.4	89	47.962	ENSSTOG00000032291	TARBP1	89	46.887	Ictidomys_tridecemlineatus
ENSXCOG00000011779	si:dkey-85a20.4	91	47.613	ENSJJAG00000017840	Tarbp1	85	47.613	Jaculus_jaculus
ENSXCOG00000011779	si:dkey-85a20.4	92	73.889	ENSKMAG00000017546	si:dkey-85a20.4	77	73.889	Kryptolebias_marmoratus
ENSXCOG00000011779	si:dkey-85a20.4	87	72.891	ENSLBEG00000012132	si:dkey-85a20.4	88	62.383	Labrus_bergylta
ENSXCOG00000011779	si:dkey-85a20.4	98	51.220	ENSLACG00000004337	TARBP1	80	50.834	Latimeria_chalumnae
ENSXCOG00000011779	si:dkey-85a20.4	96	61.219	ENSLOCG00000016214	si:dkey-85a20.4	80	61.219	Lepisosteus_oculatus
ENSXCOG00000011779	si:dkey-85a20.4	93	49.796	ENSLAFG00000011394	TARBP1	80	49.796	Loxodonta_africana
ENSXCOG00000011779	si:dkey-85a20.4	93	48.704	ENSMFAG00000041068	TARBP1	79	48.704	Macaca_fascicularis
ENSXCOG00000011779	si:dkey-85a20.4	93	48.704	ENSMMUG00000021703	TARBP1	78	48.704	Macaca_mulatta
ENSXCOG00000011779	si:dkey-85a20.4	93	48.704	ENSMNEG00000045002	TARBP1	78	48.704	Macaca_nemestrina
ENSXCOG00000011779	si:dkey-85a20.4	90	48.840	ENSMLEG00000044182	TARBP1	90	48.840	Mandrillus_leucophaeus
ENSXCOG00000011779	si:dkey-85a20.4	99	74.966	ENSMAMG00000021760	si:dkey-85a20.4	84	74.831	Mastacembelus_armatus
ENSXCOG00000011779	si:dkey-85a20.4	99	77.702	ENSMZEG00005005751	si:dkey-85a20.4	83	77.702	Maylandia_zebra
ENSXCOG00000011779	si:dkey-85a20.4	93	48.774	ENSMAUG00000020968	Tarbp1	80	48.568	Mesocricetus_auratus
ENSXCOG00000011779	si:dkey-85a20.4	93	44.658	ENSMICG00000015280	TARBP1	76	44.658	Microcebus_murinus
ENSXCOG00000011779	si:dkey-85a20.4	93	47.891	ENSMOCG00000004128	Tarbp1	80	47.690	Microtus_ochrogaster
ENSXCOG00000011779	si:dkey-85a20.4	98	64.165	ENSMMOG00000007795	si:dkey-85a20.4	88	62.797	Mola_mola
ENSXCOG00000011779	si:dkey-85a20.4	93	49.183	ENSMODG00000008504	TARBP1	77	49.046	Monodelphis_domestica
ENSXCOG00000011779	si:dkey-85a20.4	99	66.930	ENSMALG00000002916	si:dkey-85a20.4	88	66.930	Monopterus_albus
ENSXCOG00000011779	si:dkey-85a20.4	94	47.832	MGP_CAROLIEiJ_G0031729	Tarbp1	75	57.831	Mus_caroli
ENSXCOG00000011779	si:dkey-85a20.4	94	48.103	ENSMUSG00000090290	Tarbp1	80	47.967	Mus_musculus
ENSXCOG00000011779	si:dkey-85a20.4	93	48.571	MGP_PahariEiJ_G0023326	Tarbp1	80	48.435	Mus_pahari
ENSXCOG00000011779	si:dkey-85a20.4	94	47.967	MGP_SPRETEiJ_G0032846	Tarbp1	80	47.832	Mus_spretus
ENSXCOG00000011779	si:dkey-85a20.4	82	48.431	ENSMPUG00000002802	TARBP1	90	48.431	Mustela_putorius_furo
ENSXCOG00000011779	si:dkey-85a20.4	90	46.794	ENSMLUG00000002414	TARBP1	89	46.794	Myotis_lucifugus
ENSXCOG00000011779	si:dkey-85a20.4	93	48.977	ENSNLEG00000002518	TARBP1	78	49.113	Nomascus_leucogenys
ENSXCOG00000011779	si:dkey-85a20.4	81	51.695	ENSOPRG00000013822	TARBP1	68	51.695	Ochotona_princeps
ENSXCOG00000011779	si:dkey-85a20.4	91	48.431	ENSODEG00000005238	TARBP1	80	48.295	Octodon_degus
ENSXCOG00000011779	si:dkey-85a20.4	97	77.551	ENSONIG00000009789	si:dkey-85a20.4	93	77.551	Oreochromis_niloticus
ENSXCOG00000011779	si:dkey-85a20.4	93	46.922	ENSOCUG00000017418	TARBP1	78	46.922	Oryctolagus_cuniculus
ENSXCOG00000011779	si:dkey-85a20.4	100	71.003	ENSORLG00000010529	si:dkey-85a20.4	82	71.003	Oryzias_latipes
ENSXCOG00000011779	si:dkey-85a20.4	100	70.461	ENSORLG00020019264	si:dkey-85a20.4	82	70.461	Oryzias_latipes_hni
ENSXCOG00000011779	si:dkey-85a20.4	99	71.409	ENSORLG00015003276	si:dkey-85a20.4	82	71.409	Oryzias_latipes_hsok
ENSXCOG00000011779	si:dkey-85a20.4	93	46.248	ENSOGAG00000002379	TARBP1	78	46.248	Otolemur_garnettii
ENSXCOG00000011779	si:dkey-85a20.4	93	48.974	ENSOARG00000003434	TARBP1	84	48.837	Ovis_aries
ENSXCOG00000011779	si:dkey-85a20.4	90	48.977	ENSPPAG00000028097	TARBP1	90	48.977	Pan_paniscus
ENSXCOG00000011779	si:dkey-85a20.4	91	47.885	ENSPPRG00000013561	TARBP1	80	47.885	Panthera_pardus
ENSXCOG00000011779	si:dkey-85a20.4	89	47.885	ENSPTIG00000009281	TARBP1	90	47.885	Panthera_tigris_altaica
ENSXCOG00000011779	si:dkey-85a20.4	93	49.113	ENSPTRG00000002124	TARBP1	78	49.113	Pan_troglodytes
ENSXCOG00000011779	si:dkey-85a20.4	93	48.704	ENSPANG00000021933	TARBP1	78	48.704	Papio_anubis
ENSXCOG00000011779	si:dkey-85a20.4	99	63.215	ENSPKIG00000016716	si:dkey-85a20.4	82	62.943	Paramormyrops_kingsleyae
ENSXCOG00000011779	si:dkey-85a20.4	86	50.408	ENSPSIG00000010699	TARBP1	91	50.408	Pelodiscus_sinensis
ENSXCOG00000011779	si:dkey-85a20.4	93	48.840	ENSPEMG00000006888	Tarbp1	84	48.427	Peromyscus_maniculatus_bairdii
ENSXCOG00000011779	si:dkey-85a20.4	81	67.914	ENSPCIG00000029710	TARBP1	75	67.914	Phascolarctos_cinereus
ENSXCOG00000011779	si:dkey-85a20.4	97	86.264	ENSPFOG00000013020	si:dkey-85a20.4	95	86.393	Poecilia_formosa
ENSXCOG00000011779	si:dkey-85a20.4	100	86.968	ENSPLAG00000006044	si:dkey-85a20.4	84	87.097	Poecilia_latipinna
ENSXCOG00000011779	si:dkey-85a20.4	100	86.839	ENSPMEG00000017857	si:dkey-85a20.4	84	86.968	Poecilia_mexicana
ENSXCOG00000011779	si:dkey-85a20.4	100	91.144	ENSPREG00000022753	si:dkey-85a20.4	83	91.281	Poecilia_reticulata
ENSXCOG00000011779	si:dkey-85a20.4	81	48.840	ENSPPYG00000000102	TARBP1	76	48.840	Pongo_abelii
ENSXCOG00000011779	si:dkey-85a20.4	70	76.087	ENSPCAG00000004808	TARBP1	61	76.087	Procavia_capensis
ENSXCOG00000011779	si:dkey-85a20.4	93	47.658	ENSPCOG00000005666	TARBP1	78	47.514	Propithecus_coquereli
ENSXCOG00000011779	si:dkey-85a20.4	86	58.545	ENSPVAG00000014798	TARBP1	78	42.409	Pteropus_vampyrus
ENSXCOG00000011779	si:dkey-85a20.4	99	68.448	ENSPNYG00000019135	si:dkey-85a20.4	87	68.375	Pundamilia_nyererei
ENSXCOG00000011779	si:dkey-85a20.4	91	45.380	ENSRNOG00000053574	Tarbp1	78	45.245	Rattus_norvegicus
ENSXCOG00000011779	si:dkey-85a20.4	88	48.977	ENSRBIG00000043362	TARBP1	81	48.977	Rhinopithecus_bieti
ENSXCOG00000011779	si:dkey-85a20.4	93	48.977	ENSRROG00000029527	TARBP1	81	48.977	Rhinopithecus_roxellana
ENSXCOG00000011779	si:dkey-85a20.4	90	48.707	ENSSBOG00000034503	TARBP1	87	48.844	Saimiri_boliviensis_boliviensis
ENSXCOG00000011779	si:dkey-85a20.4	90	49.595	ENSSHAG00000000013	TARBP1	90	49.595	Sarcophilus_harrisii
ENSXCOG00000011779	si:dkey-85a20.4	91	60.769	ENSSFOG00015002660	si:dkey-85a20.4	94	60.769	Scleropages_formosus
ENSXCOG00000011779	si:dkey-85a20.4	99	74.114	ENSSMAG00000007081	si:dkey-85a20.4	82	74.114	Scophthalmus_maximus
ENSXCOG00000011779	si:dkey-85a20.4	99	73.728	ENSSDUG00000023566	si:dkey-85a20.4	84	73.728	Seriola_dumerili
ENSXCOG00000011779	si:dkey-85a20.4	99	76.060	ENSSLDG00000020200	si:dkey-85a20.4	83	75.923	Seriola_lalandi_dorsalis
ENSXCOG00000011779	si:dkey-85a20.4	81	58.173	ENSSARG00000012207	TARBP1	67	57.933	Sorex_araneus
ENSXCOG00000011779	si:dkey-85a20.4	94	50.409	ENSSPUG00000015364	TARBP1	79	50.409	Sphenodon_punctatus
ENSXCOG00000011779	si:dkey-85a20.4	100	78.997	ENSSPAG00000007213	si:dkey-85a20.4	83	78.862	Stegastes_partitus
ENSXCOG00000011779	si:dkey-85a20.4	93	49.113	ENSSSCG00000010160	TARBP1	79	49.113	Sus_scrofa
ENSXCOG00000011779	si:dkey-85a20.4	88	49.864	ENSTGUG00000010214	TARBP1	90	49.864	Taeniopygia_guttata
ENSXCOG00000011779	si:dkey-85a20.4	100	66.584	ENSTNIG00000016586	si:dkey-85a20.4	99	63.039	Tetraodon_nigroviridis
ENSXCOG00000011779	si:dkey-85a20.4	86	45.889	ENSTTRG00000008707	TARBP1	76	45.889	Tursiops_truncatus
ENSXCOG00000011779	si:dkey-85a20.4	87	48.295	ENSUMAG00000006730	TARBP1	88	48.295	Ursus_maritimus
ENSXCOG00000011779	si:dkey-85a20.4	74	72.619	ENSVPAG00000007665	TARBP1	67	72.619	Vicugna_pacos
ENSXCOG00000011779	si:dkey-85a20.4	91	49.250	ENSVVUG00000007460	TARBP1	91	48.093	Vulpes_vulpes
ENSXCOG00000011779	si:dkey-85a20.4	90	46.739	ENSXETG00000016224	tarbp1	90	46.594	Xenopus_tropicalis
ENSXCOG00000011779	si:dkey-85a20.4	72	98.214	ENSXMAG00000009600	si:dkey-85a20.4	96	90.231	Xiphophorus_maculatus