EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000011864 (Gene tree)
Gene ID: -
Gene Symbol: rab23
Alias: zgc:110261
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 2163 bases
Position: chrKQ557215.1:12200546-12202708
Accession: ZDB-GENE-050522-328
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000015707	GTP_EFTU	PF00009.27	3.1e-06	1	1
ENSXCOP00000015707	MMR_HSR1	PF01926.23	5.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000015901	-	708	-	ENSXCOP00000015707	235 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000011864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000011864	rab23	80	36.126	ENSXCOG00000008042	-	79	36.047
ENSXCOG00000011864	rab23	71	34.104	ENSXCOG00000013344	rab33a	56	33.540
ENSXCOG00000011864	rab23	69	34.337	ENSXCOG00000019054	rab9a	70	33.117
ENSXCOG00000011864	rab23	60	30.769	ENSXCOG00000020608	hrasb	81	32.174
ENSXCOG00000011864	rab23	68	32.099	ENSXCOG00000020508	kras	85	32.099
ENSXCOG00000011864	rab23	67	37.975	ENSXCOG00000015802	RAB41	69	37.671
ENSXCOG00000011864	rab23	68	35.000	ENSXCOG00000006300	-	72	32.500
ENSXCOG00000011864	rab23	66	37.107	ENSXCOG00000006807	rab39bb	69	37.415
ENSXCOG00000011864	rab23	70	36.047	ENSXCOG00000016370	RAB29	75	35.032
ENSXCOG00000011864	rab23	65	34.416	ENSXCOG00000016452	rab22a	73	33.803
ENSXCOG00000011864	rab23	80	35.602	ENSXCOG00000001357	rab11a	66	36.047
ENSXCOG00000011864	rab23	69	35.366	ENSXCOG00000019281	rheb	80	35.294
ENSXCOG00000011864	rab23	73	34.682	ENSXCOG00000010770	-	63	35.897
ENSXCOG00000011864	rab23	67	37.342	ENSXCOG00000006259	rab6a	70	36.986
ENSXCOG00000011864	rab23	68	32.716	ENSXCOG00000011229	rras2	96	30.286
ENSXCOG00000011864	rab23	71	38.323	ENSXCOG00000019533	rab13	81	39.474
ENSXCOG00000011864	rab23	52	38.710	ENSXCOG00000009194	-	77	40.000
ENSXCOG00000011864	rab23	80	35.079	ENSXCOG00000009190	-	79	35.465
ENSXCOG00000011864	rab23	81	37.500	ENSXCOG00000009541	rab34a	70	35.450
ENSXCOG00000011864	rab23	66	35.404	ENSXCOG00000009094	rab9b	73	34.014
ENSXCOG00000011864	rab23	65	37.107	ENSXCOG00000012032	-	66	36.054
ENSXCOG00000011864	rab23	69	33.929	ENSXCOG00000020575	RAB9A	70	34.416
ENSXCOG00000011864	rab23	73	34.682	ENSXCOG00000013842	rab1ab	75	36.601
ENSXCOG00000011864	rab23	70	34.118	ENSXCOG00000020125	rab25a	83	34.959
ENSXCOG00000011864	rab23	68	36.250	ENSXCOG00000020121	rab5aa	69	35.135
ENSXCOG00000011864	rab23	70	36.686	ENSXCOG00000008410	si:dkey-34d22.5	71	37.580
ENSXCOG00000011864	rab23	74	33.889	ENSXCOG00000019310	rab12	63	35.849
ENSXCOG00000011864	rab23	71	36.364	ENSXCOG00000018683	zgc:101559	70	35.976
ENSXCOG00000011864	rab23	75	35.519	ENSXCOG00000019921	rab7a	77	35.119
ENSXCOG00000011864	rab23	60	36.364	ENSXCOG00000007650	rras	75	35.811
ENSXCOG00000011864	rab23	70	33.929	ENSXCOG00000003428	rab42a	72	34.615
ENSXCOG00000011864	rab23	88	32.381	ENSXCOG00000004226	rab11al	87	31.937
ENSXCOG00000011864	rab23	80	33.684	ENSXCOG00000004227	rab25b	79	33.333
ENSXCOG00000011864	rab23	67	38.608	ENSXCOG00000002232	rab6bb	70	38.356
ENSXCOG00000011864	rab23	68	36.875	ENSXCOG00000016788	rab5c	74	34.375
ENSXCOG00000011864	rab23	61	36.054	ENSXCOG00000000469	rab33ba	56	35.556
ENSXCOG00000011864	rab23	74	36.364	ENSXCOG00000010695	zgc:171927	76	38.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000011864	rab23	99	81.780	ENSG00000112210	RAB23	99	81.780	Homo_sapiens
ENSXCOG00000011864	rab23	100	94.468	ENSAPOG00000008892	rab23	100	94.468	Acanthochromis_polyacanthus
ENSXCOG00000011864	rab23	99	81.356	ENSAMEG00000006825	RAB23	99	81.356	Ailuropoda_melanoleuca
ENSXCOG00000011864	rab23	100	82.128	ENSACIG00000020496	rab23	100	82.128	Amphilophus_citrinellus
ENSXCOG00000011864	rab23	100	94.894	ENSAOCG00000004234	rab23	100	94.894	Amphiprion_ocellaris
ENSXCOG00000011864	rab23	100	94.894	ENSAPEG00000019758	rab23	100	94.894	Amphiprion_percula
ENSXCOG00000011864	rab23	100	95.319	ENSATEG00000020913	rab23	100	95.319	Anabas_testudineus
ENSXCOG00000011864	rab23	75	89.266	ENSAPLG00000003715	RAB23	100	89.266	Anas_platyrhynchos
ENSXCOG00000011864	rab23	99	77.637	ENSACAG00000006656	RAB23	99	77.637	Anolis_carolinensis
ENSXCOG00000011864	rab23	99	81.780	ENSANAG00000027052	-	99	81.780	Aotus_nancymaae
ENSXCOG00000011864	rab23	100	93.617	ENSACLG00000002819	rab23	100	93.617	Astatotilapia_calliptera
ENSXCOG00000011864	rab23	100	86.498	ENSAMXG00000014960	rab23	100	86.498	Astyanax_mexicanus
ENSXCOG00000011864	rab23	99	80.508	ENSBTAG00000005362	RAB23	99	80.508	Bos_taurus
ENSXCOG00000011864	rab23	99	81.780	ENSCJAG00000010247	RAB23	99	81.780	Callithrix_jacchus
ENSXCOG00000011864	rab23	99	81.780	ENSCAFG00000002459	RAB23	99	81.780	Canis_familiaris
ENSXCOG00000011864	rab23	99	81.780	ENSCAFG00020015900	RAB23	99	81.780	Canis_lupus_dingo
ENSXCOG00000011864	rab23	99	80.508	ENSCHIG00000009815	RAB23	99	80.508	Capra_hircus
ENSXCOG00000011864	rab23	100	81.435	ENSTSYG00000029126	RAB23	100	81.435	Carlito_syrichta
ENSXCOG00000011864	rab23	99	80.851	ENSCPOG00000030218	RAB23	99	80.851	Cavia_porcellus
ENSXCOG00000011864	rab23	99	81.356	ENSCCAG00000020364	RAB23	99	81.356	Cebus_capucinus
ENSXCOG00000011864	rab23	99	82.203	ENSCATG00000027876	RAB23	99	82.203	Cercocebus_atys
ENSXCOG00000011864	rab23	99	81.356	ENSCLAG00000000797	RAB23	99	81.356	Chinchilla_lanigera
ENSXCOG00000011864	rab23	99	82.203	ENSCSAG00000013438	RAB23	99	82.203	Chlorocebus_sabaeus
ENSXCOG00000011864	rab23	99	81.356	ENSCPBG00000022640	RAB23	99	80.932	Chrysemys_picta_bellii
ENSXCOG00000011864	rab23	100	65.844	ENSCING00000001155	-	100	66.667	Ciona_intestinalis
ENSXCOG00000011864	rab23	100	63.071	ENSCSAVG00000001356	-	100	63.223	Ciona_savignyi
ENSXCOG00000011864	rab23	99	81.780	ENSCANG00000031065	RAB23	99	81.780	Colobus_angolensis_palliatus
ENSXCOG00000011864	rab23	99	81.780	ENSCGRG00001008994	Rab23	99	81.780	Cricetulus_griseus_chok1gshd
ENSXCOG00000011864	rab23	99	80.851	ENSCGRG00000013630	Rab23	99	80.851	Cricetulus_griseus_crigri
ENSXCOG00000011864	rab23	100	81.277	ENSCSEG00000010565	rab23	100	81.277	Cynoglossus_semilaevis
ENSXCOG00000011864	rab23	100	93.617	ENSCVAG00000020501	rab23	100	93.617	Cyprinodon_variegatus
ENSXCOG00000011864	rab23	100	85.654	ENSDARG00000004151	rab23	100	85.654	Danio_rerio
ENSXCOG00000011864	rab23	99	80.508	ENSDNOG00000015501	RAB23	99	80.508	Dasypus_novemcinctus
ENSXCOG00000011864	rab23	100	79.325	ENSDORG00000028344	Rab23	100	79.325	Dipodomys_ordii
ENSXCOG00000011864	rab23	94	60.793	FBgn0037364	Rab23	82	60.793	Drosophila_melanogaster
ENSXCOG00000011864	rab23	96	64.348	ENSEBUG00000010861	-	91	64.348	Eptatretus_burgeri
ENSXCOG00000011864	rab23	99	81.780	ENSEASG00005003529	RAB23	99	81.780	Equus_asinus_asinus
ENSXCOG00000011864	rab23	99	81.780	ENSECAG00000013427	RAB23	99	81.780	Equus_caballus
ENSXCOG00000011864	rab23	100	80.591	ENSEEUG00000015045	RAB23	100	80.591	Erinaceus_europaeus
ENSXCOG00000011864	rab23	99	88.362	ENSELUG00000020788	rab23	99	88.362	Esox_lucius
ENSXCOG00000011864	rab23	99	81.780	ENSFCAG00000044358	RAB23	99	81.780	Felis_catus
ENSXCOG00000011864	rab23	99	80.508	ENSFALG00000001708	RAB23	99	80.508	Ficedula_albicollis
ENSXCOG00000011864	rab23	99	81.356	ENSFDAG00000014834	RAB23	99	81.356	Fukomys_damarensis
ENSXCOG00000011864	rab23	100	97.021	ENSFHEG00000023069	rab23	100	97.021	Fundulus_heteroclitus
ENSXCOG00000011864	rab23	100	90.213	ENSGMOG00000005102	rab23	100	90.213	Gadus_morhua
ENSXCOG00000011864	rab23	99	81.780	ENSGALG00000016279	RAB23	99	81.780	Gallus_gallus
ENSXCOG00000011864	rab23	100	99.149	ENSGAFG00000007684	rab23	100	99.149	Gambusia_affinis
ENSXCOG00000011864	rab23	100	93.617	ENSGACG00000006151	rab23	100	93.617	Gasterosteus_aculeatus
ENSXCOG00000011864	rab23	99	80.932	ENSGAGG00000012709	RAB23	99	80.508	Gopherus_agassizii
ENSXCOG00000011864	rab23	100	81.277	ENSHBUG00000007966	rab23	100	81.277	Haplochromis_burtoni
ENSXCOG00000011864	rab23	99	67.500	ENSHGLG00000009371	-	99	66.667	Heterocephalus_glaber_female
ENSXCOG00000011864	rab23	99	82.627	ENSHGLG00000013030	-	99	82.627	Heterocephalus_glaber_female
ENSXCOG00000011864	rab23	99	67.500	ENSHGLG00100017177	-	99	66.667	Heterocephalus_glaber_male
ENSXCOG00000011864	rab23	99	82.627	ENSHGLG00100005945	-	99	82.627	Heterocephalus_glaber_male
ENSXCOG00000011864	rab23	100	79.574	ENSHCOG00000013919	rab23	100	79.574	Hippocampus_comes
ENSXCOG00000011864	rab23	100	74.262	ENSIPUG00000016494	rab23	100	74.262	Ictalurus_punctatus
ENSXCOG00000011864	rab23	99	80.932	ENSSTOG00000010962	RAB23	99	80.932	Ictidomys_tridecemlineatus
ENSXCOG00000011864	rab23	99	81.356	ENSJJAG00000020094	Rab23	99	81.356	Jaculus_jaculus
ENSXCOG00000011864	rab23	100	94.468	ENSKMAG00000018270	rab23	100	94.468	Kryptolebias_marmoratus
ENSXCOG00000011864	rab23	99	94.444	ENSLBEG00000013176	rab23	99	94.444	Labrus_bergylta
ENSXCOG00000011864	rab23	100	82.700	ENSLACG00000004025	RAB23	100	82.700	Latimeria_chalumnae
ENSXCOG00000011864	rab23	100	83.333	ENSLOCG00000016999	rab23	100	82.917	Lepisosteus_oculatus
ENSXCOG00000011864	rab23	99	82.203	ENSLAFG00000007209	RAB23	99	82.203	Loxodonta_africana
ENSXCOG00000011864	rab23	99	82.203	ENSMFAG00000032369	RAB23	99	82.203	Macaca_fascicularis
ENSXCOG00000011864	rab23	99	82.203	ENSMMUG00000018003	RAB23	99	82.203	Macaca_mulatta
ENSXCOG00000011864	rab23	99	82.203	ENSMNEG00000037012	RAB23	99	82.203	Macaca_nemestrina
ENSXCOG00000011864	rab23	99	82.203	ENSMLEG00000042429	RAB23	99	82.203	Mandrillus_leucophaeus
ENSXCOG00000011864	rab23	100	94.043	ENSMAMG00000015456	rab23	100	94.043	Mastacembelus_armatus
ENSXCOG00000011864	rab23	100	93.617	ENSMZEG00005005441	rab23	100	93.617	Maylandia_zebra
ENSXCOG00000011864	rab23	99	81.356	ENSMGAG00000013882	RAB23	99	81.356	Meleagris_gallopavo
ENSXCOG00000011864	rab23	99	82.627	ENSMICG00000014037	RAB23	99	82.627	Microcebus_murinus
ENSXCOG00000011864	rab23	99	81.356	ENSMOCG00000000444	Rab23	99	81.356	Microtus_ochrogaster
ENSXCOG00000011864	rab23	100	82.128	ENSMMOG00000007703	rab23	100	82.128	Mola_mola
ENSXCOG00000011864	rab23	99	81.356	ENSMODG00000018720	RAB23	99	81.356	Monodelphis_domestica
ENSXCOG00000011864	rab23	100	92.340	ENSMALG00000002136	rab23	100	92.340	Monopterus_albus
ENSXCOG00000011864	rab23	99	80.085	MGP_CAROLIEiJ_G0014015	Rab23	99	80.085	Mus_caroli
ENSXCOG00000011864	rab23	99	79.661	ENSMUSG00000004768	Rab23	99	79.661	Mus_musculus
ENSXCOG00000011864	rab23	99	79.237	MGP_PahariEiJ_G0027261	Rab23	99	79.237	Mus_pahari
ENSXCOG00000011864	rab23	99	79.661	MGP_SPRETEiJ_G0014820	Rab23	99	79.661	Mus_spretus
ENSXCOG00000011864	rab23	99	72.996	ENSMPUG00000002642	RAB23	99	72.996	Mustela_putorius_furo
ENSXCOG00000011864	rab23	99	82.627	ENSMLUG00000004058	RAB23	99	82.627	Myotis_lucifugus
ENSXCOG00000011864	rab23	99	81.356	ENSNGAG00000018038	Rab23	99	81.356	Nannospalax_galili
ENSXCOG00000011864	rab23	100	93.617	ENSNBRG00000013691	rab23	100	93.617	Neolamprologus_brichardi
ENSXCOG00000011864	rab23	99	82.203	ENSNLEG00000027830	RAB23	99	82.203	Nomascus_leucogenys
ENSXCOG00000011864	rab23	99	80.085	ENSODEG00000016056	RAB23	99	80.085	Octodon_degus
ENSXCOG00000011864	rab23	100	93.644	ENSONIG00000009749	rab23	100	93.644	Oreochromis_niloticus
ENSXCOG00000011864	rab23	99	81.780	ENSOANG00000001398	RAB23	99	81.780	Ornithorhynchus_anatinus
ENSXCOG00000011864	rab23	99	82.203	ENSOCUG00000004816	RAB23	99	82.203	Oryctolagus_cuniculus
ENSXCOG00000011864	rab23	100	90.213	ENSORLG00000010115	rab23	100	90.213	Oryzias_latipes
ENSXCOG00000011864	rab23	100	90.213	ENSORLG00020020220	rab23	100	90.213	Oryzias_latipes_hni
ENSXCOG00000011864	rab23	100	90.213	ENSORLG00015004033	rab23	100	90.213	Oryzias_latipes_hsok
ENSXCOG00000011864	rab23	100	91.489	ENSOMEG00000001706	rab23	100	91.489	Oryzias_melastigma
ENSXCOG00000011864	rab23	99	81.356	ENSOGAG00000005675	RAB23	99	81.356	Otolemur_garnettii
ENSXCOG00000011864	rab23	99	80.508	ENSOARG00000005749	RAB23	99	80.508	Ovis_aries
ENSXCOG00000011864	rab23	99	81.780	ENSPPAG00000010023	RAB23	99	81.780	Pan_paniscus
ENSXCOG00000011864	rab23	99	81.356	ENSPPRG00000012453	RAB23	99	81.356	Panthera_pardus
ENSXCOG00000011864	rab23	99	81.780	ENSPTIG00000009435	RAB23	99	81.780	Panthera_tigris_altaica
ENSXCOG00000011864	rab23	99	82.203	ENSPTRG00000043341	RAB23	99	82.203	Pan_troglodytes
ENSXCOG00000011864	rab23	99	82.203	ENSPANG00000017772	RAB23	99	82.203	Papio_anubis
ENSXCOG00000011864	rab23	86	83.085	ENSPKIG00000024310	rab23	99	83.085	Paramormyrops_kingsleyae
ENSXCOG00000011864	rab23	99	80.932	ENSPSIG00000015579	RAB23	99	80.508	Pelodiscus_sinensis
ENSXCOG00000011864	rab23	100	77.872	ENSPMGG00000008577	rab23	100	77.872	Periophthalmus_magnuspinnatus
ENSXCOG00000011864	rab23	99	80.932	ENSPEMG00000023271	Rab23	99	80.932	Peromyscus_maniculatus_bairdii
ENSXCOG00000011864	rab23	100	67.660	ENSPMAG00000006835	-	100	67.660	Petromyzon_marinus
ENSXCOG00000011864	rab23	99	80.508	ENSPCIG00000007267	RAB23	99	80.508	Phascolarctos_cinereus
ENSXCOG00000011864	rab23	100	99.149	ENSPFOG00000011493	rab23	100	99.149	Poecilia_formosa
ENSXCOG00000011864	rab23	100	98.723	ENSPLAG00000011697	rab23	100	98.723	Poecilia_latipinna
ENSXCOG00000011864	rab23	100	98.723	ENSPMEG00000017300	rab23	100	98.723	Poecilia_mexicana
ENSXCOG00000011864	rab23	100	85.532	ENSPREG00000022509	rab23	100	85.532	Poecilia_reticulata
ENSXCOG00000011864	rab23	99	82.203	ENSPPYG00000016739	RAB23	99	82.203	Pongo_abelii
ENSXCOG00000011864	rab23	99	82.203	ENSPCOG00000028471	RAB23	99	82.203	Propithecus_coquereli
ENSXCOG00000011864	rab23	99	72.881	ENSPVAG00000017693	RAB23	99	72.881	Pteropus_vampyrus
ENSXCOG00000011864	rab23	100	93.617	ENSPNYG00000019639	rab23	100	93.617	Pundamilia_nyererei
ENSXCOG00000011864	rab23	100	86.498	ENSPNAG00000024728	rab23	100	86.498	Pygocentrus_nattereri
ENSXCOG00000011864	rab23	99	80.932	ENSRNOG00000012629	Rab23	99	80.932	Rattus_norvegicus
ENSXCOG00000011864	rab23	99	77.178	ENSRBIG00000030547	RAB23	99	77.178	Rhinopithecus_bieti
ENSXCOG00000011864	rab23	99	82.203	ENSRROG00000035920	RAB23	99	82.203	Rhinopithecus_roxellana
ENSXCOG00000011864	rab23	99	81.356	ENSSBOG00000033237	RAB23	99	81.356	Saimiri_boliviensis_boliviensis
ENSXCOG00000011864	rab23	99	80.508	ENSSHAG00000006379	RAB23	99	80.508	Sarcophilus_harrisii
ENSXCOG00000011864	rab23	100	86.920	ENSSFOG00015012604	rab23	100	86.920	Scleropages_formosus
ENSXCOG00000011864	rab23	99	94.872	ENSSMAG00000006341	rab23	99	94.872	Scophthalmus_maximus
ENSXCOG00000011864	rab23	100	95.319	ENSSDUG00000023508	rab23	100	95.319	Seriola_dumerili
ENSXCOG00000011864	rab23	100	95.319	ENSSLDG00000000287	rab23	100	95.319	Seriola_lalandi_dorsalis
ENSXCOG00000011864	rab23	99	80.508	ENSSARG00000013689	RAB23	99	80.508	Sorex_araneus
ENSXCOG00000011864	rab23	99	82.627	ENSSPUG00000006274	RAB23	99	82.627	Sphenodon_punctatus
ENSXCOG00000011864	rab23	100	94.894	ENSSPAG00000010373	rab23	100	94.894	Stegastes_partitus
ENSXCOG00000011864	rab23	99	80.085	ENSSSCG00000029539	RAB23	99	80.085	Sus_scrofa
ENSXCOG00000011864	rab23	99	80.932	ENSTGUG00000012794	RAB23	99	80.932	Taeniopygia_guttata
ENSXCOG00000011864	rab23	100	90.638	ENSTRUG00000015697	rab23	100	90.638	Takifugu_rubripes
ENSXCOG00000011864	rab23	100	90.638	ENSTNIG00000016575	rab23	100	90.638	Tetraodon_nigroviridis
ENSXCOG00000011864	rab23	99	81.780	ENSUAMG00000013367	RAB23	99	81.780	Ursus_americanus
ENSXCOG00000011864	rab23	99	81.780	ENSUMAG00000018629	RAB23	99	81.780	Ursus_maritimus
ENSXCOG00000011864	rab23	81	63.874	ENSVPAG00000006805	RAB23	100	63.874	Vicugna_pacos
ENSXCOG00000011864	rab23	99	82.203	ENSVVUG00000008535	RAB23	99	82.203	Vulpes_vulpes
ENSXCOG00000011864	rab23	99	76.371	ENSXETG00000004449	rab23	99	76.371	Xenopus_tropicalis
ENSXCOG00000011864	rab23	100	99.574	ENSXMAG00000009387	rab23	100	99.574	Xiphophorus_maculatus