EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000011871 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
Etr-3|cb906|cugbp2|fj87b07|wu:fj87b07
Full Name
-
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Minus strand
Length
131873 bases
Position
chrKQ557209.1:979786-1111658
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000015742RRM_1PF00076.222.1e-3912
ENSXCOP00000015742RRM_1PF00076.222.1e-3922
ENSXCOP00000015744RRM_1PF00076.222.4e-3912
ENSXCOP00000015744RRM_1PF00076.222.4e-3922
ENSXCOP00000015743RRM_1PF00076.223e-3912
ENSXCOP00000015743RRM_1PF00076.223e-3922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000015936-1392-ENSXCOP00000015742463 (aa)--
ENSXCOT00000015937-1518-ENSXCOP00000015743505 (aa)--
ENSXCOT00000015938-1446-ENSXCOP00000015744481 (aa)--
Gene Model
Click here to download ENSXCOG00000011871's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011871's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000011871-9439.443ENSXCOG00000017592celf49240.389
ENSXCOG00000011871-8542.188ENSXCOG00000017706-9442.700
ENSXCOG00000011871-9634.455ENSXCOG00000019503celf3b8936.099
ENSXCOG00000011871-9540.919ENSXCOG00000019737celf3a9938.938
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000011871-9981.727ENSG00000048740CELF210082.209Homo_sapiens
ENSXCOG00000011871-9972.545ENSAPOG00000008530-9871.627Acanthochromis_polyacanthus
ENSXCOG00000011871-9987.273ENSAPOG00000017441-10083.845Acanthochromis_polyacanthus
ENSXCOG00000011871-9980.040ENSAMEG00000004946CELF29779.960Ailuropoda_melanoleuca
ENSXCOG00000011871-9770.445ENSACIG00000019405-10069.980Amphilophus_citrinellus
ENSXCOG00000011871-9785.954ENSACIG00000004318-10085.954Amphilophus_citrinellus
ENSXCOG00000011871-7294.872ENSAOCG00000022420-8194.872Amphiprion_ocellaris
ENSXCOG00000011871-9972.545ENSAOCG00000022110-9572.505Amphiprion_ocellaris
ENSXCOG00000011871-9972.545ENSAPEG00000003362-10069.358Amphiprion_percula
ENSXCOG00000011871-9778.234ENSAPEG00000017360-10080.911Amphiprion_percula
ENSXCOG00000011871-9772.967ENSATEG00000017169-9572.505Anabas_testudineus
ENSXCOG00000011871-9988.105ENSATEG00000021942-10087.885Anabas_testudineus
ENSXCOG00000011871-9981.727ENSAPLG00000010064CELF29781.855Anas_platyrhynchos
ENSXCOG00000011871-9485.950ENSACAG00000007661CELF210085.950Anolis_carolinensis
ENSXCOG00000011871-9981.727ENSANAG00000024646CELF29981.087Aotus_nancymaae
ENSXCOG00000011871-9972.345ENSACLG00000003085-9572.177Astatotilapia_calliptera
ENSXCOG00000011871-9787.295ENSACLG00000013768-10087.295Astatotilapia_calliptera
ENSXCOG00000011871-10082.236ENSAMXG00000005933celf29583.401Astyanax_mexicanus
ENSXCOG00000011871-9981.727ENSBTAG00000008937CELF29585.205Bos_taurus
ENSXCOG00000011871-9981.200ENSCJAG00000020663CELF29981.087Callithrix_jacchus
ENSXCOG00000011871-9782.209ENSCAFG00000004973CELF210082.209Canis_familiaris
ENSXCOG00000011871-9881.616ENSCAFG00020005823CELF210078.178Canis_lupus_dingo
ENSXCOG00000011871-9981.200ENSCHIG00000015379CELF29781.200Capra_hircus
ENSXCOG00000011871-9478.886ENSTSYG00000005118CELF29871.459Carlito_syrichta
ENSXCOG00000011871-9867.409ENSTSYG00000025428-9767.409Carlito_syrichta
ENSXCOG00000011871-9968.530ENSCAPG00000014106CELF29967.894Cavia_aperea
ENSXCOG00000011871-9981.727ENSCPOG00000012567CELF210081.059Cavia_porcellus
ENSXCOG00000011871-9981.200ENSCCAG00000020159CELF210082.209Cebus_capucinus
ENSXCOG00000011871-9981.727ENSCATG00000032144CELF210081.059Cercocebus_atys
ENSXCOG00000011871-9981.727ENSCLAG00000010311CELF210081.059Chinchilla_lanigera
ENSXCOG00000011871-9881.087ENSCSAG00000013405CELF29581.087Chlorocebus_sabaeus
ENSXCOG00000011871-9471.102ENSCHOG00000002945CELF210071.102Choloepus_hoffmanni
ENSXCOG00000011871-9981.928ENSCPBG00000027840CELF210080.000Chrysemys_picta_bellii
ENSXCOG00000011871-9881.087ENSCANG00000033443CELF210081.087Colobus_angolensis_palliatus
ENSXCOG00000011871-9981.526ENSCGRG00001015058Celf29980.800Cricetulus_griseus_chok1gshd
ENSXCOG00000011871-9981.526ENSCGRG00000011178Celf210081.800Cricetulus_griseus_crigri
ENSXCOG00000011871-9785.832ENSCSEG00000003342-10085.832Cynoglossus_semilaevis
ENSXCOG00000011871-9764.066ENSCSEG00000015335-10063.860Cynoglossus_semilaevis
ENSXCOG00000011871-9988.710ENSCVAG00000004383-10086.335Cyprinodon_variegatus
ENSXCOG00000011871-9971.026ENSCVAG00000009088-10067.871Cyprinodon_variegatus
ENSXCOG00000011871-9983.871ENSDARG00000002131celf210091.429Danio_rerio
ENSXCOG00000011871-9882.222ENSDNOG00000000252CELF210081.595Dasypus_novemcinctus
ENSXCOG00000011871-9981.727ENSDORG00000006455Celf210082.209Dipodomys_ordii
ENSXCOG00000011871-9864.244ENSETEG00000008414CELF210064.244Echinops_telfairi
ENSXCOG00000011871-9445.565ENSEBUG00000008128-9244.556Eptatretus_burgeri
ENSXCOG00000011871-9851.540ENSEBUG00000007835-9951.351Eptatretus_burgeri
ENSXCOG00000011871-10060.446ENSEBUG00000002471-8659.082Eptatretus_burgeri
ENSXCOG00000011871-9756.674ENSEBUG00000014743-10057.692Eptatretus_burgeri
ENSXCOG00000011871-9881.087ENSEASG00005019262CELF210077.694Equus_asinus_asinus
ENSXCOG00000011871-9981.124ENSECAG00000006649CELF210082.209Equus_caballus
ENSXCOG00000011871-9874.749ENSEEUG00000005658CELF210074.749Erinaceus_europaeus
ENSXCOG00000011871-9969.745ENSELUG00000008279-9769.548Esox_lucius
ENSXCOG00000011871-10083.644ENSELUG00000005848-10084.306Esox_lucius
ENSXCOG00000011871-9981.855ENSFCAG00000004738CELF210081.263Felis_catus
ENSXCOG00000011871-9981.727ENSFALG00000001873CELF29681.727Ficedula_albicollis
ENSXCOG00000011871-9981.727ENSFDAG00000015074CELF210081.059Fukomys_damarensis
ENSXCOG00000011871-9888.438ENSFHEG00000010537-10088.660Fundulus_heteroclitus
ENSXCOG00000011871-9971.429ENSFHEG00000007136-9570.356Fundulus_heteroclitus
ENSXCOG00000011871-9964.529ENSGMOG00000010163-9268.261Gadus_morhua
ENSXCOG00000011871-9981.727ENSGALG00000034590CELF210081.800Gallus_gallus
ENSXCOG00000011871-9872.581ENSGAFG00000015151-10068.821Gambusia_affinis
ENSXCOG00000011871-9787.705ENSGAFG00000004951-10087.705Gambusia_affinis
ENSXCOG00000011871-9981.727ENSGAGG00000023497CELF29581.727Gopherus_agassizii
ENSXCOG00000011871-9981.200ENSGGOG00000009330CELF210081.087Gorilla_gorilla
ENSXCOG00000011871-9987.652ENSHBUG00000005058-9587.652Haplochromis_burtoni
ENSXCOG00000011871-9766.393ENSHBUG00000005718-10065.376Haplochromis_burtoni
ENSXCOG00000011871-9981.727ENSHGLG00000017139CELF210081.059Heterocephalus_glaber_female
ENSXCOG00000011871-9982.329ENSHGLG00100010282CELF210081.059Heterocephalus_glaber_male
ENSXCOG00000011871-9772.690ENSHCOG00000005953-10075.269Hippocampus_comes
ENSXCOG00000011871-9771.779ENSHCOG00000011353-9571.779Hippocampus_comes
ENSXCOG00000011871-9980.039ENSIPUG00000008622celf210079.482Ictalurus_punctatus
ENSXCOG00000011871-9981.727ENSSTOG00000001564CELF210081.595Ictidomys_tridecemlineatus
ENSXCOG00000011871-9981.928ENSJJAG00000011472Celf210081.800Jaculus_jaculus
ENSXCOG00000011871-10086.542ENSKMAG00000014795-10086.542Kryptolebias_marmoratus
ENSXCOG00000011871-10069.703ENSLBEG00000010618-9769.763Labrus_bergylta
ENSXCOG00000011871-9882.626ENSLACG00000009779CELF29682.072Latimeria_chalumnae
ENSXCOG00000011871-9984.040ENSLOCG00000015690celf29484.040Lepisosteus_oculatus
ENSXCOG00000011871-9981.727ENSLAFG00000013612CELF29481.727Loxodonta_africana
ENSXCOG00000011871-9981.200ENSMFAG00000033084CELF210081.059Macaca_fascicularis
ENSXCOG00000011871-9981.124ENSMMUG00000037449CELF29980.800Macaca_mulatta
ENSXCOG00000011871-9977.912ENSMNEG00000045450CELF29977.956Macaca_nemestrina
ENSXCOG00000011871-9478.886ENSMLEG00000040420CELF210077.427Mandrillus_leucophaeus
ENSXCOG00000011871-9973.293ENSMAMG00000023208-10073.361Mastacembelus_armatus
ENSXCOG00000011871-10095.477ENSMAMG00000017876-10087.090Mastacembelus_armatus
ENSXCOG00000011871-9972.345ENSMZEG00005006950-9572.177Maylandia_zebra
ENSXCOG00000011871-9988.259ENSMZEG00005021669-10086.128Maylandia_zebra
ENSXCOG00000011871-10080.556ENSMGAG00000004551CELF210082.004Meleagris_gallopavo
ENSXCOG00000011871-9474.769ENSMAUG00000009783Celf29174.769Mesocricetus_auratus
ENSXCOG00000011871-9981.200ENSMICG00000007867CELF210081.059Microcebus_murinus
ENSXCOG00000011871-9981.727ENSMOCG00000004765Celf210081.059Microtus_ochrogaster
ENSXCOG00000011871-9964.072ENSMMOG00000012104-10064.400Mola_mola
ENSXCOG00000011871-9786.885ENSMMOG00000006702-10086.885Mola_mola
ENSXCOG00000011871-9184.932ENSMODG00000016763CELF29984.932Monodelphis_domestica
ENSXCOG00000011871-9974.059ENSMALG00000011132-10068.311Monopterus_albus
ENSXCOG00000011871-10084.917ENSMALG00000000961-10086.885Monopterus_albus
ENSXCOG00000011871-9981.928MGP_CAROLIEiJ_G0023161Celf210097.826Mus_caroli
ENSXCOG00000011871-9981.928ENSMUSG00000002107Celf210097.826Mus_musculus
ENSXCOG00000011871-9981.928MGP_PahariEiJ_G0019221Celf210097.826Mus_pahari
ENSXCOG00000011871-9981.928MGP_SPRETEiJ_G0024079Celf210097.826Mus_spretus
ENSXCOG00000011871-9981.727ENSMPUG00000016406CELF29781.727Mustela_putorius_furo
ENSXCOG00000011871-9980.847ENSMLUG00000005791CELF29780.762Myotis_lucifugus
ENSXCOG00000011871-9979.381ENSNGAG00000021158Celf29778.969Nannospalax_galili
ENSXCOG00000011871-9787.295ENSNBRG00000012818-10087.295Neolamprologus_brichardi
ENSXCOG00000011871-9972.345ENSNBRG00000000322-10069.070Neolamprologus_brichardi
ENSXCOG00000011871-9981.000ENSNLEG00000011968CELF29980.962Nomascus_leucogenys
ENSXCOG00000011871-9870.135ENSMEUG00000015276CELF210070.135Notamacropus_eugenii
ENSXCOG00000011871-9879.921ENSOPRG00000011502CELF210079.921Ochotona_princeps
ENSXCOG00000011871-9981.727ENSODEG00000000887CELF210081.595Octodon_degus
ENSXCOG00000011871-9872.782ENSONIG00000008624-9572.323Oreochromis_niloticus
ENSXCOG00000011871-9988.259ENSONIG00000017931-9488.259Oreochromis_niloticus
ENSXCOG00000011871-9167.188ENSOANG00000015432-9567.188Ornithorhynchus_anatinus
ENSXCOG00000011871-9981.727ENSOCUG00000004961CELF29481.727Oryctolagus_cuniculus
ENSXCOG00000011871-10071.571ENSORLG00000003894-10068.571Oryzias_latipes
ENSXCOG00000011871-9988.057ENSORLG00000017111-9588.057Oryzias_latipes
ENSXCOG00000011871-10085.300ENSORLG00020006562-10087.885Oryzias_latipes_hni
ENSXCOG00000011871-10071.571ENSORLG00020015261-9771.315Oryzias_latipes_hni
ENSXCOG00000011871-9988.057ENSORLG00015006221-9788.057Oryzias_latipes_hsok
ENSXCOG00000011871-10071.571ENSORLG00015008084-10068.571Oryzias_latipes_hsok
ENSXCOG00000011871-10071.485ENSOMEG00000000277-10068.501Oryzias_melastigma
ENSXCOG00000011871-9988.259ENSOMEG00000023599-9588.235Oryzias_melastigma
ENSXCOG00000011871-8987.535ENSOGAG00000005541CELF29887.535Otolemur_garnettii
ENSXCOG00000011871-9182.740ENSOARG00000014052CELF29582.740Ovis_aries
ENSXCOG00000011871-9981.200ENSPPAG00000029170CELF210081.087Pan_paniscus
ENSXCOG00000011871-9981.400ENSPPRG00000021517CELF210081.263Panthera_pardus
ENSXCOG00000011871-9474.208ENSPTIG00000019418CELF28773.077Panthera_tigris_altaica
ENSXCOG00000011871-9981.200ENSPTRG00000002284CELF210081.059Pan_troglodytes
ENSXCOG00000011871-9981.727ENSPANG00000023401CELF29981.616Papio_anubis
ENSXCOG00000011871-9984.274ENSPKIG00000025033-10079.430Paramormyrops_kingsleyae
ENSXCOG00000011871-76100.000ENSPKIG00000025513-82100.000Paramormyrops_kingsleyae
ENSXCOG00000011871-9882.222ENSPSIG00000013861CELF29781.673Pelodiscus_sinensis
ENSXCOG00000011871-9766.803ENSPMGG00000005719-10065.092Periophthalmus_magnuspinnatus
ENSXCOG00000011871-9987.885ENSPMGG00000014571-9887.195Periophthalmus_magnuspinnatus
ENSXCOG00000011871-9981.727ENSPEMG00000017244Celf210081.059Peromyscus_maniculatus_bairdii
ENSXCOG00000011871-7848.921ENSPMAG00000006638-9948.325Petromyzon_marinus
ENSXCOG00000011871-6487.619ENSPCIG00000003025CELF210087.619Phascolarctos_cinereus
ENSXCOG00000011871-9972.366ENSPFOG00000013076-10069.333Poecilia_formosa
ENSXCOG00000011871-9478.769ENSPFOG00000012840-10078.769Poecilia_formosa
ENSXCOG00000011871-9872.929ENSPLAG00000021601-10070.021Poecilia_latipinna
ENSXCOG00000011871-8993.388ENSPLAG00000020446-8593.388Poecilia_latipinna
ENSXCOG00000011871-9973.092ENSPMEG00000007082-10069.202Poecilia_mexicana
ENSXCOG00000011871-9988.664ENSPMEG00000013036-10088.501Poecilia_mexicana
ENSXCOG00000011871-9872.782ENSPREG00000007795-10069.011Poecilia_reticulata
ENSXCOG00000011871-9989.069ENSPREG00000018002-10088.912Poecilia_reticulata
ENSXCOG00000011871-9981.200ENSPPYG00000002083CELF29781.200Pongo_abelii
ENSXCOG00000011871-9873.372ENSPCAG00000010882CELF29972.968Procavia_capensis
ENSXCOG00000011871-10080.493ENSPCOG00000026161CELF210080.493Propithecus_coquereli
ENSXCOG00000011871-7394.681ENSPVAG00000003294CELF27294.681Pteropus_vampyrus
ENSXCOG00000011871-9972.545ENSPNYG00000002565-10069.260Pundamilia_nyererei
ENSXCOG00000011871-10086.335ENSPNYG00000015832-10086.335Pundamilia_nyererei
ENSXCOG00000011871-9983.468ENSPNAG00000006639celf210083.162Pygocentrus_nattereri
ENSXCOG00000011871-9881.818ENSRNOG00000023661Celf210078.368Rattus_norvegicus
ENSXCOG00000011871-9981.000ENSRBIG00000042443CELF210081.059Rhinopithecus_bieti
ENSXCOG00000011871-9978.600ENSRROG00000044478CELF29978.600Rhinopithecus_roxellana
ENSXCOG00000011871-9981.727ENSSBOG00000028844CELF210081.325Saimiri_boliviensis_boliviensis
ENSXCOG00000011871-10073.506ENSSFOG00015023817-10073.415Scleropages_formosus
ENSXCOG00000011871-9980.321ENSSFOG00015023981-9980.645Scleropages_formosus
ENSXCOG00000011871-9771.487ENSSMAG00000008985-10071.166Scophthalmus_maximus
ENSXCOG00000011871-9987.097ENSSMAG00000008925-10083.573Scophthalmus_maximus
ENSXCOG00000011871-9787.090ENSSDUG00000015603-10087.090Seriola_dumerili
ENSXCOG00000011871-9773.320ENSSDUG00000022515-10069.202Seriola_dumerili
ENSXCOG00000011871-9972.892ENSSLDG00000010918-10069.202Seriola_lalandi_dorsalis
ENSXCOG00000011871-9785.451ENSSLDG00000001157-10085.451Seriola_lalandi_dorsalis
ENSXCOG00000011871-9778.958ENSSPUG00000018833CELF210078.958Sphenodon_punctatus
ENSXCOG00000011871-9973.092ENSSPAG00000005647-9573.061Stegastes_partitus
ENSXCOG00000011871-9386.111ENSSPAG00000007458-9786.111Stegastes_partitus
ENSXCOG00000011871-9981.855ENSSSCG00000011121-9985.479Sus_scrofa
ENSXCOG00000011871-9882.222ENSTGUG00000002136CELF210082.222Taeniopygia_guttata
ENSXCOG00000011871-9969.048ENSTRUG00000016905-9768.787Takifugu_rubripes
ENSXCOG00000011871-9988.057ENSTRUG00000010147-9488.057Takifugu_rubripes
ENSXCOG00000011871-9984.476ENSTNIG00000007201-9984.476Tetraodon_nigroviridis
ENSXCOG00000011871-9969.679ENSTNIG00000016009-9969.416Tetraodon_nigroviridis
ENSXCOG00000011871-9879.882ENSTBEG00000007939CELF210079.882Tupaia_belangeri
ENSXCOG00000011871-9872.169ENSTTRG00000014665CELF210072.169Tursiops_truncatus
ENSXCOG00000011871-5787.097ENSUAMG00000008810CELF29387.097Ursus_americanus
ENSXCOG00000011871-9976.954ENSUMAG00000012780CELF29876.877Ursus_maritimus
ENSXCOG00000011871-9470.615ENSVPAG00000009360CELF210070.615Vicugna_pacos
ENSXCOG00000011871-9982.056ENSVVUG00000006430CELF210082.209Vulpes_vulpes
ENSXCOG00000011871-9980.237ENSXETG00000021992celf210080.335Xenopus_tropicalis
ENSXCOG00000011871-9773.061ENSXMAG00000016859-10068.821Xiphophorus_maculatus
ENSXCOG00000011871-9889.047ENSXMAG00000024223-9589.047Xiphophorus_maculatus

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