EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000011896 (Gene tree)
Gene ID: -
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 25009 bases
Position: chrKQ557203.1:6801595-6826603
Accession: ZDB-GENE-030131-9180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000015750	Exo_endo_phos	PF03372.23	1.5e-14	1	1
ENSXCOP00000015748	Exo_endo_phos	PF03372.23	1.6e-14	1	1
ENSXCOP00000015750	DUF1866	PF08952.11	2e-55	1	1
ENSXCOP00000015748	DUF1866	PF08952.11	2.1e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000015942	-	4017	-	ENSXCOP00000015748	1338 (aa)	-	-
ENSXCOT00000015944	-	3897	-	ENSXCOP00000015750	1298 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000011896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011896's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000011896	synj1	99	68.130	ENSG00000159082	SYNJ1	100	81.702	Homo_sapiens
ENSXCOG00000011896	synj1	99	84.655	ENSAPOG00000002809	synj1	99	84.471	Acanthochromis_polyacanthus
ENSXCOG00000011896	synj1	96	68.154	ENSAMEG00000015028	SYNJ1	68	75.909	Ailuropoda_melanoleuca
ENSXCOG00000011896	synj1	99	87.557	ENSACIG00000008857	synj1	99	86.489	Amphilophus_citrinellus
ENSXCOG00000011896	synj1	99	89.308	ENSAOCG00000009835	synj1	99	88.538	Amphiprion_ocellaris
ENSXCOG00000011896	synj1	99	88.409	ENSAPEG00000021010	synj1	79	88.744	Amphiprion_percula
ENSXCOG00000011896	synj1	99	87.738	ENSATEG00000002306	synj1	79	87.434	Anabas_testudineus
ENSXCOG00000011896	synj1	84	75.846	ENSAPLG00000011832	SYNJ1	68	75.846	Anas_platyrhynchos
ENSXCOG00000011896	synj1	96	68.986	ENSACAG00000003006	-	84	77.455	Anolis_carolinensis
ENSXCOG00000011896	synj1	96	68.150	ENSANAG00000027325	SYNJ1	84	75.771	Aotus_nancymaae
ENSXCOG00000011896	synj1	99	87.709	ENSACLG00000002255	synj1	99	86.456	Astatotilapia_calliptera
ENSXCOG00000011896	synj1	99	81.136	ENSAMXG00000008208	synj1	80	83.026	Astyanax_mexicanus
ENSXCOG00000011896	synj1	96	71.226	ENSBTAG00000003063	SYNJ1	83	76.182	Bos_taurus
ENSXCOG00000011896	synj1	96	70.347	ENSCJAG00000009187	SYNJ1	84	75.793	Callithrix_jacchus
ENSXCOG00000011896	synj1	99	67.730	ENSCAFG00000009041	SYNJ1	86	74.864	Canis_familiaris
ENSXCOG00000011896	synj1	99	69.711	ENSCAFG00020025776	SYNJ1	84	75.636	Canis_lupus_dingo
ENSXCOG00000011896	synj1	96	70.657	ENSCHIG00000005095	SYNJ1	72	75.818	Capra_hircus
ENSXCOG00000011896	synj1	99	68.209	ENSTSYG00000014541	SYNJ1	85	75.590	Carlito_syrichta
ENSXCOG00000011896	synj1	92	59.535	ENSCAPG00000014483	SYNJ1	75	72.901	Cavia_aperea
ENSXCOG00000011896	synj1	98	67.299	ENSCPOG00000012182	SYNJ1	83	75.978	Cavia_porcellus
ENSXCOG00000011896	synj1	96	68.596	ENSCCAG00000020825	SYNJ1	84	75.681	Cebus_capucinus
ENSXCOG00000011896	synj1	96	70.533	ENSCATG00000033891	SYNJ1	86	75.771	Cercocebus_atys
ENSXCOG00000011896	synj1	96	70.101	ENSCLAG00000009796	SYNJ1	100	81.081	Chinchilla_lanigera
ENSXCOG00000011896	synj1	97	67.352	ENSCSAG00000009654	SYNJ1	83	75.953	Chlorocebus_sabaeus
ENSXCOG00000011896	synj1	65	72.491	ENSCHOG00000012390	SYNJ1	54	72.491	Choloepus_hoffmanni
ENSXCOG00000011896	synj1	90	71.452	ENSCPBG00000006402	SYNJ1	87	76.364	Chrysemys_picta_bellii
ENSXCOG00000011896	synj1	96	69.881	ENSCANG00000031359	SYNJ1	84	75.953	Colobus_angolensis_palliatus
ENSXCOG00000011896	synj1	99	69.947	ENSCGRG00001010861	Synj1	83	75.477	Cricetulus_griseus_chok1gshd
ENSXCOG00000011896	synj1	99	68.981	ENSCGRG00000015749	Synj1	100	80.939	Cricetulus_griseus_crigri
ENSXCOG00000011896	synj1	95	87.302	ENSCSEG00000019614	synj1	97	89.457	Cynoglossus_semilaevis
ENSXCOG00000011896	synj1	99	89.377	ENSCVAG00000019250	synj1	99	89.363	Cyprinodon_variegatus
ENSXCOG00000011896	synj1	99	82.407	ENSDARG00000025011	synj1	99	83.142	Danio_rerio
ENSXCOG00000011896	synj1	96	67.004	ENSDNOG00000010732	SYNJ1	70	72.966	Dasypus_novemcinctus
ENSXCOG00000011896	synj1	54	80.939	ENSDORG00000014735	-	100	80.939	Dipodomys_ordii
ENSXCOG00000011896	synj1	69	76.923	ENSETEG00000018674	SYNJ1	59	76.923	Echinops_telfairi
ENSXCOG00000011896	synj1	99	67.620	ENSEASG00005006287	SYNJ1	98	77.042	Equus_asinus_asinus
ENSXCOG00000011896	synj1	99	69.588	ENSECAG00000004829	SYNJ1	86	75.547	Equus_caballus
ENSXCOG00000011896	synj1	73	70.818	ENSEEUG00000005150	SYNJ1	62	70.818	Erinaceus_europaeus
ENSXCOG00000011896	synj1	99	78.774	ENSELUG00000009731	synj1	81	82.342	Esox_lucius
ENSXCOG00000011896	synj1	96	70.397	ENSFCAG00000012498	SYNJ1	84	75.455	Felis_catus
ENSXCOG00000011896	synj1	96	69.350	ENSFDAG00000016818	SYNJ1	100	81.081	Fukomys_damarensis
ENSXCOG00000011896	synj1	99	90.752	ENSFHEG00000017689	synj1	80	91.568	Fundulus_heteroclitus
ENSXCOG00000011896	synj1	81	85.629	ENSGMOG00000014852	synj1	81	85.504	Gadus_morhua
ENSXCOG00000011896	synj1	99	68.306	ENSGALG00000034317	SYNJ1	81	65.543	Gallus_gallus
ENSXCOG00000011896	synj1	99	95.872	ENSGAFG00000019466	synj1	80	95.872	Gambusia_affinis
ENSXCOG00000011896	synj1	99	80.672	ENSGACG00000020575	synj1	100	83.536	Gasterosteus_aculeatus
ENSXCOG00000011896	synj1	99	69.683	ENSGAGG00000022523	SYNJ1	82	76.846	Gopherus_agassizii
ENSXCOG00000011896	synj1	99	68.630	ENSGGOG00000015945	SYNJ1	86	75.862	Gorilla_gorilla
ENSXCOG00000011896	synj1	99	87.463	ENSHBUG00000007774	synj1	99	86.531	Haplochromis_burtoni
ENSXCOG00000011896	synj1	97	68.216	ENSHGLG00000006420	SYNJ1	100	80.797	Heterocephalus_glaber_female
ENSXCOG00000011896	synj1	97	68.216	ENSHGLG00100012591	SYNJ1	100	80.797	Heterocephalus_glaber_male
ENSXCOG00000011896	synj1	95	93.587	ENSHCOG00000012774	synj1	96	93.587	Hippocampus_comes
ENSXCOG00000011896	synj1	98	83.540	ENSIPUG00000010691	SYNJ1	83	82.371	Ictalurus_punctatus
ENSXCOG00000011896	synj1	97	68.826	ENSSTOG00000015806	SYNJ1	83	75.909	Ictidomys_tridecemlineatus
ENSXCOG00000011896	synj1	97	63.936	ENSJJAG00000020168	Synj1	68	70.182	Jaculus_jaculus
ENSXCOG00000011896	synj1	99	89.025	ENSKMAG00000004221	synj1	93	86.945	Kryptolebias_marmoratus
ENSXCOG00000011896	synj1	99	86.584	ENSLBEG00000015081	synj1	99	84.167	Labrus_bergylta
ENSXCOG00000011896	synj1	84	75.023	ENSLACG00000005928	SYNJ1	70	75.566	Latimeria_chalumnae
ENSXCOG00000011896	synj1	85	81.818	ENSLOCG00000009230	synj1	73	82.589	Lepisosteus_oculatus
ENSXCOG00000011896	synj1	96	67.670	ENSLAFG00000011806	SYNJ1	69	75.818	Loxodonta_africana
ENSXCOG00000011896	synj1	94	69.101	ENSMFAG00000018883	SYNJ1	84	74.720	Macaca_fascicularis
ENSXCOG00000011896	synj1	96	68.276	ENSMMUG00000004624	SYNJ1	83	76.134	Macaca_mulatta
ENSXCOG00000011896	synj1	96	70.455	ENSMNEG00000040077	SYNJ1	79	75.953	Macaca_nemestrina
ENSXCOG00000011896	synj1	99	67.827	ENSMLEG00000037029	SYNJ1	84	75.862	Mandrillus_leucophaeus
ENSXCOG00000011896	synj1	99	88.889	ENSMAMG00000013404	synj1	79	87.250	Mastacembelus_armatus
ENSXCOG00000011896	synj1	99	88.450	ENSMZEG00005024358	synj1	99	87.538	Maylandia_zebra
ENSXCOG00000011896	synj1	99	65.855	ENSMGAG00000014522	SYNJ1	81	64.435	Meleagris_gallopavo
ENSXCOG00000011896	synj1	99	68.906	ENSMAUG00000009743	Synj1	100	80.797	Mesocricetus_auratus
ENSXCOG00000011896	synj1	99	68.413	ENSMICG00000034953	SYNJ1	86	75.862	Microcebus_murinus
ENSXCOG00000011896	synj1	99	85.134	ENSMMOG00000010203	synj1	99	84.946	Mola_mola
ENSXCOG00000011896	synj1	95	67.329	ENSMODG00000021073	SYNJ1	83	71.351	Monodelphis_domestica
ENSXCOG00000011896	synj1	99	85.800	ENSMALG00000014015	synj1	80	86.672	Monopterus_albus
ENSXCOG00000011896	synj1	97	67.863	MGP_CAROLIEiJ_G0020951	Synj1	100	81.081	Mus_caroli
ENSXCOG00000011896	synj1	97	69.248	ENSMUSG00000022973	Synj1	100	81.081	Mus_musculus
ENSXCOG00000011896	synj1	97	69.314	MGP_PahariEiJ_G0016656	Synj1	100	81.081	Mus_pahari
ENSXCOG00000011896	synj1	97	69.225	MGP_SPRETEiJ_G0021857	Synj1	100	81.223	Mus_spretus
ENSXCOG00000011896	synj1	84	75.566	ENSMPUG00000001153	SYNJ1	70	75.566	Mustela_putorius_furo
ENSXCOG00000011896	synj1	52	79.853	ENSMLUG00000026584	-	100	79.853	Myotis_lucifugus
ENSXCOG00000011896	synj1	98	69.847	ENSNGAG00000000453	Synj1	100	81.081	Nannospalax_galili
ENSXCOG00000011896	synj1	99	85.023	ENSNBRG00000011936	synj1	99	82.117	Neolamprologus_brichardi
ENSXCOG00000011896	synj1	85	64.667	ENSNLEG00000003734	SYNJ1	85	72.922	Nomascus_leucogenys
ENSXCOG00000011896	synj1	75	64.865	ENSMEUG00000004158	-	65	63.720	Notamacropus_eugenii
ENSXCOG00000011896	synj1	88	77.333	ENSOPRG00000013602	SYNJ1	63	77.333	Ochotona_princeps
ENSXCOG00000011896	synj1	54	81.223	ENSODEG00000002409	-	100	81.223	Octodon_degus
ENSXCOG00000011896	synj1	85	93.091	ENSONIG00000004667	synj1	78	93.091	Oreochromis_niloticus
ENSXCOG00000011896	synj1	93	65.039	ENSOANG00000006929	SYNJ1	69	74.486	Ornithorhynchus_anatinus
ENSXCOG00000011896	synj1	97	66.288	ENSOCUG00000001420	SYNJ1	67	77.085	Oryctolagus_cuniculus
ENSXCOG00000011896	synj1	99	87.757	ENSORLG00000004320	synj1	99	86.312	Oryzias_latipes
ENSXCOG00000011896	synj1	99	86.173	ENSORLG00020011994	synj1	98	85.485	Oryzias_latipes_hni
ENSXCOG00000011896	synj1	99	86.429	ENSORLG00015018077	synj1	77	87.087	Oryzias_latipes_hsok
ENSXCOG00000011896	synj1	99	87.615	ENSOMEG00000014322	synj1	99	86.340	Oryzias_melastigma
ENSXCOG00000011896	synj1	96	65.594	ENSOGAG00000006010	SYNJ1	68	72.579	Otolemur_garnettii
ENSXCOG00000011896	synj1	96	69.444	ENSOARG00000013414	SYNJ1	68	75.634	Ovis_aries
ENSXCOG00000011896	synj1	99	68.206	ENSPPAG00000026784	SYNJ1	84	76.044	Pan_paniscus
ENSXCOG00000011896	synj1	96	70.491	ENSPPRG00000023469	SYNJ1	84	75.455	Panthera_pardus
ENSXCOG00000011896	synj1	96	70.481	ENSPTIG00000007930	SYNJ1	84	75.545	Panthera_tigris_altaica
ENSXCOG00000011896	synj1	99	68.851	ENSPTRG00000023787	SYNJ1	86	75.862	Pan_troglodytes
ENSXCOG00000011896	synj1	99	68.851	ENSPTRG00000048135	-	86	75.862	Pan_troglodytes
ENSXCOG00000011896	synj1	96	70.455	ENSPANG00000022531	SYNJ1	84	75.953	Papio_anubis
ENSXCOG00000011896	synj1	85	84.574	ENSPKIG00000022603	synj1	89	84.601	Paramormyrops_kingsleyae
ENSXCOG00000011896	synj1	99	86.438	ENSPMGG00000016831	synj1	93	85.417	Periophthalmus_magnuspinnatus
ENSXCOG00000011896	synj1	99	67.212	ENSPEMG00000018767	Synj1	100	81.366	Peromyscus_maniculatus_bairdii
ENSXCOG00000011896	synj1	79	58.869	ENSPMAG00000002887	synj1	80	58.163	Petromyzon_marinus
ENSXCOG00000011896	synj1	97	66.436	ENSPCIG00000016372	SYNJ1	82	75.092	Phascolarctos_cinereus
ENSXCOG00000011896	synj1	99	95.903	ENSPFOG00000016886	synj1	99	95.903	Poecilia_formosa
ENSXCOG00000011896	synj1	99	95.083	ENSPLAG00000017559	synj1	99	93.294	Poecilia_latipinna
ENSXCOG00000011896	synj1	99	94.149	ENSPMEG00000007643	synj1	80	93.971	Poecilia_mexicana
ENSXCOG00000011896	synj1	99	96.554	ENSPREG00000012412	synj1	99	93.960	Poecilia_reticulata
ENSXCOG00000011896	synj1	96	68.495	ENSPPYG00000011365	SYNJ1	78	75.771	Pongo_abelii
ENSXCOG00000011896	synj1	84	81.429	ENSPCAG00000009906	SYNJ1	58	81.429	Procavia_capensis
ENSXCOG00000011896	synj1	88	76.179	ENSPCOG00000024841	SYNJ1	82	76.179	Propithecus_coquereli
ENSXCOG00000011896	synj1	84	71.960	ENSPVAG00000000892	SYNJ1	69	71.739	Pteropus_vampyrus
ENSXCOG00000011896	synj1	99	86.993	ENSPNYG00000022989	synj1	99	86.917	Pundamilia_nyererei
ENSXCOG00000011896	synj1	88	87.435	ENSPNAG00000021119	synj1	91	88.225	Pygocentrus_nattereri
ENSXCOG00000011896	synj1	96	70.781	ENSRNOG00000002051	Synj1	85	75.953	Rattus_norvegicus
ENSXCOG00000011896	synj1	96	68.523	ENSRBIG00000034477	SYNJ1	84	75.862	Rhinopithecus_bieti
ENSXCOG00000011896	synj1	96	68.600	ENSRROG00000039256	SYNJ1	84	75.953	Rhinopithecus_roxellana
ENSXCOG00000011896	synj1	96	70.444	ENSSBOG00000021001	SYNJ1	84	75.681	Saimiri_boliviensis_boliviensis
ENSXCOG00000011896	synj1	94	66.538	ENSSHAG00000008538	SYNJ1	70	74.887	Sarcophilus_harrisii
ENSXCOG00000011896	synj1	99	81.694	ENSSFOG00015006095	synj1	83	81.484	Scleropages_formosus
ENSXCOG00000011896	synj1	99	86.518	ENSSMAG00000018066	synj1	99	85.672	Scophthalmus_maximus
ENSXCOG00000011896	synj1	99	88.737	ENSSDUG00000013058	synj1	79	88.692	Seriola_dumerili
ENSXCOG00000011896	synj1	99	89.101	ENSSLDG00000021406	synj1	99	88.675	Seriola_lalandi_dorsalis
ENSXCOG00000011896	synj1	99	68.565	ENSSPUG00000012552	SYNJ1	71	75.818	Sphenodon_punctatus
ENSXCOG00000011896	synj1	94	88.283	ENSSPAG00000006812	SYNJ1	78	86.953	Stegastes_partitus
ENSXCOG00000011896	synj1	99	89.154	ENSSPAG00000017029	synj1	99	87.023	Stegastes_partitus
ENSXCOG00000011896	synj1	99	67.825	ENSSSCG00000012035	SYNJ1	85	75.294	Sus_scrofa
ENSXCOG00000011896	synj1	99	67.188	ENSTGUG00000013445	SYNJ1	70	75.656	Taeniopygia_guttata
ENSXCOG00000011896	synj1	99	85.538	ENSTRUG00000006907	synj1	97	83.333	Takifugu_rubripes
ENSXCOG00000011896	synj1	85	87.343	ENSTNIG00000009940	synj1	90	87.320	Tetraodon_nigroviridis
ENSXCOG00000011896	synj1	74	83.228	ENSTBEG00000016298	SYNJ1	61	83.228	Tupaia_belangeri
ENSXCOG00000011896	synj1	99	60.776	ENSTTRG00000002222	SYNJ1	71	68.875	Tursiops_truncatus
ENSXCOG00000011896	synj1	99	68.365	ENSUAMG00000018606	SYNJ1	99	78.387	Ursus_americanus
ENSXCOG00000011896	synj1	99	68.361	ENSUMAG00000018419	SYNJ1	99	78.387	Ursus_maritimus
ENSXCOG00000011896	synj1	72	81.429	ENSVPAG00000001241	SYNJ1	59	81.429	Vicugna_pacos
ENSXCOG00000011896	synj1	96	68.077	ENSVVUG00000023125	SYNJ1	83	75.727	Vulpes_vulpes
ENSXCOG00000011896	synj1	97	66.165	ENSXETG00000009899	synj1	69	73.736	Xenopus_tropicalis
ENSXCOG00000011896	synj1	99	97.017	ENSXMAG00000017524	synj1	99	97.017	Xiphophorus_maculatus