EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000011944 (Gene tree)
Gene ID: -
Gene Symbol: rtcb (1 of many)
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 1831 bases
Position: chrKQ557209.1:1885438-1887268
Accession: ZDB-GENE-040426-2096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000015812	RtcB	PF01139.17	1.6e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000016007	-	687	-	ENSXCOP00000015812	228 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000011944's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000011944's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000011944	rtcb	100	96.507	ENSAOCG00000005662	rtcb	50	96.507	Amphiprion_ocellaris
ENSXCOG00000011944	rtcb	88	92.000	ENSAPLG00000008226	RTCB	93	92.000	Anas_platyrhynchos
ENSXCOG00000011944	rtcb	100	94.323	ENSACLG00000008367	rtcb	50	94.323	Astatotilapia_calliptera
ENSXCOG00000011944	rtcb	100	69.869	ENSCHIG00000017428	-	100	69.869	Capra_hircus
ENSXCOG00000011944	rtcb	100	82.969	ENSCSAVG00000008124	-	54	79.325	Ciona_savignyi
ENSXCOG00000011944	rtcb	100	74.236	ENSEEUG00000006251	RTCB	51	74.236	Erinaceus_europaeus
ENSXCOG00000011944	rtcb	100	82.533	ENSMICG00000036677	-	52	82.533	Microcebus_murinus
ENSXCOG00000011944	rtcb	100	92.140	ENSPSIG00000011690	RTCB	50	92.140	Pelodiscus_sinensis
ENSXCOG00000011944	rtcb	68	92.308	ENSRROG00000021544	-	83	92.308	Rhinopithecus_roxellana
ENSXCOG00000011944	rtcb	100	94.323	ENSTRUG00000009880	rtcb	50	94.323	Takifugu_rubripes
ENSXCOG00000011944	rtcb	100	92.576	ENSVVUG00000023408	RTCB	56	92.576	Vulpes_vulpes