EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000012032 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
3447 bases
Position
chrKQ557220.1:17374109-17377555
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000015931MMR_HSR1PF01926.234.1e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000016128-666-ENSXCOP00000015931221 (aa)--
Gene Model
Click here to download ENSXCOG00000012032's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012032's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000012032-9037.850ENSXCOG00000010695zgc:1719279637.850
ENSXCOG00000012032-7040.909ENSXCOG00000006259rab6a7140.909
ENSXCOG00000012032-7336.145ENSXCOG00000020575RAB9A6837.821
ENSXCOG00000012032-6843.333ENSXCOG00000008042-6643.333
ENSXCOG00000012032-9039.901ENSXCOG00000013842rab1ab9639.901
ENSXCOG00000012032-8138.547ENSXCOG00000020125rab25a8939.416
ENSXCOG00000012032-9034.826ENSXCOG00000020121rab5aa8934.826
ENSXCOG00000012032-9034.951ENSXCOG00000019054rab9a8834.951
ENSXCOG00000012032-6843.333ENSXCOG00000009190-6643.333
ENSXCOG00000012032-8637.186ENSXCOG00000019310rab127037.640
ENSXCOG00000012032-5143.860ENSXCOG00000003192-5343.860
ENSXCOG00000012032-7644.379ENSXCOG00000010770-6544.379
ENSXCOG00000012032-6832.911ENSXCOG00000010812dnajc275532.911
ENSXCOG00000012032-8055.249ENSXCOG00000013344rab33a6355.249
ENSXCOG00000012032-6939.873ENSXCOG00000009094rab9b7439.873
ENSXCOG00000012032-6945.395ENSXCOG00000019533rab137845.395
ENSXCOG00000012032-6730.000ENSXCOG00000003137nkiras17630.000
ENSXCOG00000012032-5446.667ENSXCOG00000009194-8746.667
ENSXCOG00000012032-6843.421ENSXCOG00000003428rab42a6743.421
ENSXCOG00000012032-8031.285ENSXCOG00000020608hrasb9431.579
ENSXCOG00000012032-9032.338ENSXCOG00000002232rab6bb9432.338
ENSXCOG00000012032-7735.088ENSXCOG00000016788rab5c7735.088
ENSXCOG00000012032-9057.346ENSXCOG00000000469rab33ba7959.278
ENSXCOG00000012032-6632.192ENSXCOG00000020508kras8432.773
ENSXCOG00000012032-6940.523ENSXCOG00000008410si:dkey-34d22.56840.523
ENSXCOG00000012032-6636.054ENSXCOG00000011864rab236537.107
ENSXCOG00000012032-7037.662ENSXCOG00000015802RAB417037.662
ENSXCOG00000012032-7636.095ENSXCOG00000006300-7435.673
ENSXCOG00000012032-9149.756ENSXCOG00000018683zgc:1015598549.756
ENSXCOG00000012032-6944.444ENSXCOG00000006807rab39bb6944.444
ENSXCOG00000012032-7038.608ENSXCOG00000016370RAB297338.608
ENSXCOG00000012032-9036.275ENSXCOG00000016452rab22a9836.275
ENSXCOG00000012032-9032.020ENSXCOG00000019921rab7a9532.020
ENSXCOG00000012032-6843.333ENSXCOG00000001357rab11a5543.333
ENSXCOG00000012032-7340.719ENSXCOG00000004226rab11al7540.719
ENSXCOG00000012032-7738.596ENSXCOG00000004227rab25b9434.314
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000012032-9159.709ENSG00000172007RAB33B8660.000Homo_sapiens
ENSXCOG00000012032-9270.089ENSAPOG00000005341-9270.404Acanthochromis_polyacanthus
ENSXCOG00000012032-9057.075ENSAPOG00000019727rab33ba7959.296Acanthochromis_polyacanthus
ENSXCOG00000012032-9159.709ENSAMEG00000010983RAB33B8160.000Ailuropoda_melanoleuca
ENSXCOG00000012032-9954.237ENSACIG00000021855rab33ba9054.795Amphilophus_citrinellus
ENSXCOG00000012032-10068.880ENSACIG00000013119-9968.981Amphilophus_citrinellus
ENSXCOG00000012032-9155.251ENSAOCG00000005790rab33ba8855.251Amphiprion_ocellaris
ENSXCOG00000012032-9269.643ENSAOCG00000005301-9269.955Amphiprion_ocellaris
ENSXCOG00000012032-6884.000ENSAPEG00000015430-8089.247Amphiprion_percula
ENSXCOG00000012032-9154.795ENSAPEG00000005001rab33ba8854.795Amphiprion_percula
ENSXCOG00000012032-9058.081ENSATEG00000016312rab33ba8456.039Anabas_testudineus
ENSXCOG00000012032-9170.136ENSATEG00000022993-9270.136Anabas_testudineus
ENSXCOG00000012032-9955.752ENSACAG00000002227RAB33B8857.561Anolis_carolinensis
ENSXCOG00000012032-9258.937ENSANAG00000027700RAB33B8659.223Aotus_nancymaae
ENSXCOG00000012032-9154.795ENSACLG00000005720rab33ba9054.795Astatotilapia_calliptera
ENSXCOG00000012032-10074.274ENSACLG00000010965-9273.423Astatotilapia_calliptera
ENSXCOG00000012032-8161.658ENSAMXG00000040286rab33ba7961.658Astyanax_mexicanus
ENSXCOG00000012032-9056.039ENSAMXG00000037428-9555.446Astyanax_mexicanus
ENSXCOG00000012032-9159.223ENSBTAG00000003208RAB33B8659.512Bos_taurus
ENSXCOG00000012032-9258.937ENSCJAG00000040200RAB33B8659.223Callithrix_jacchus
ENSXCOG00000012032-9159.709ENSCAFG00020020861RAB33B8660.000Canis_lupus_dingo
ENSXCOG00000012032-9159.709ENSCHIG00000020393RAB33B8660.000Capra_hircus
ENSXCOG00000012032-9159.709ENSTSYG00000033032RAB33B8660.000Carlito_syrichta
ENSXCOG00000012032-8262.903ENSCPOG00000030742RAB33B7963.243Cavia_porcellus
ENSXCOG00000012032-9258.937ENSCCAG00000019859RAB33B8659.223Cebus_capucinus
ENSXCOG00000012032-9258.937ENSCATG00000007092RAB33B8659.223Cercocebus_atys
ENSXCOG00000012032-9259.813ENSCLAG00000003133RAB33B8162.963Chinchilla_lanigera
ENSXCOG00000012032-9258.937ENSCSAG00000003531RAB33B8659.223Chlorocebus_sabaeus
ENSXCOG00000012032-8958.500ENSCHOG00000009633RAB33B9958.500Choloepus_hoffmanni
ENSXCOG00000012032-9958.222ENSCPBG00000027605RAB33B8860.000Chrysemys_picta_bellii
ENSXCOG00000012032-9258.937ENSCANG00000034858RAB33B8659.223Colobus_angolensis_palliatus
ENSXCOG00000012032-9158.738ENSCGRG00001016897Rab33b8659.024Cricetulus_griseus_chok1gshd
ENSXCOG00000012032-9158.738ENSCGRG00000015464Rab33b8659.024Cricetulus_griseus_crigri
ENSXCOG00000012032-9055.714ENSCSEG00000020348rab33ba7956.995Cynoglossus_semilaevis
ENSXCOG00000012032-10066.667ENSCSEG00000014479-9267.265Cynoglossus_semilaevis
ENSXCOG00000012032-10086.726ENSCVAG00000000862-9286.473Cyprinodon_variegatus
ENSXCOG00000012032-9156.481ENSDARG00000052290rab33ba8956.481Danio_rerio
ENSXCOG00000012032-9558.605ENSDNOG00000005253RAB33B8159.512Dasypus_novemcinctus
ENSXCOG00000012032-9257.971ENSDORG00000023618Rab33b8658.537Dipodomys_ordii
ENSXCOG00000012032-9159.223ENSETEG00000003629RAB33B8659.512Echinops_telfairi
ENSXCOG00000012032-9159.709ENSEASG00005007864RAB33B8660.000Equus_asinus_asinus
ENSXCOG00000012032-9159.709ENSECAG00000019611RAB33B8660.000Equus_caballus
ENSXCOG00000012032-9954.167ENSELUG00000002575rab33ba9054.545Esox_lucius
ENSXCOG00000012032-9958.824ENSELUG00000011352-9258.051Esox_lucius
ENSXCOG00000012032-10056.579ENSFALG00000004886RAB33B8759.223Ficedula_albicollis
ENSXCOG00000012032-9060.476ENSFDAG00000016833RAB33B7962.703Fukomys_damarensis
ENSXCOG00000012032-9056.872ENSFHEG00000006820rab33ba7958.763Fundulus_heteroclitus
ENSXCOG00000012032-9258.454ENSGMOG00000000885rab33ba9059.794Gadus_morhua
ENSXCOG00000012032-9957.018ENSGALG00000009790RAB33B8759.512Gallus_gallus
ENSXCOG00000012032-9057.820ENSGAFG00000019659rab33ba7959.794Gambusia_affinis
ENSXCOG00000012032-9186.878ENSGAFG00000015249-9286.878Gambusia_affinis
ENSXCOG00000012032-9955.656ENSGACG00000019540rab33ba8957.353Gasterosteus_aculeatus
ENSXCOG00000012032-9958.222ENSGAGG00000002936RAB33B8860.000Gopherus_agassizii
ENSXCOG00000012032-9159.709ENSGGOG00000040896RAB33B8660.000Gorilla_gorilla
ENSXCOG00000012032-8458.376ENSHBUG00000013162rab33ba9458.376Haplochromis_burtoni
ENSXCOG00000012032-10073.859ENSHBUG00000001714-9273.874Haplochromis_burtoni
ENSXCOG00000012032-9149.065ENSHGLG00000007292-7949.733Heterocephalus_glaber_female
ENSXCOG00000012032-8461.053ENSHGLG00000008370RAB33B8161.376Heterocephalus_glaber_female
ENSXCOG00000012032-9149.533ENSHGLG00100001635-7950.267Heterocephalus_glaber_male
ENSXCOG00000012032-8461.053ENSHGLG00100002929RAB33B8161.376Heterocephalus_glaber_male
ENSXCOG00000012032-8458.291ENSHCOG00000003569rab33ba8158.291Hippocampus_comes
ENSXCOG00000012032-10070.763ENSHCOG00000012834-9269.907Hippocampus_comes
ENSXCOG00000012032-9159.048ENSIPUG00000017684rab33b8859.048Ictalurus_punctatus
ENSXCOG00000012032-7058.065ENSIPUG00000009784-7156.522Ictalurus_punctatus
ENSXCOG00000012032-9159.709ENSSTOG00000027511RAB33B8660.000Ictidomys_tridecemlineatus
ENSXCOG00000012032-10075.519ENSKMAG00000020034-7674.775Kryptolebias_marmoratus
ENSXCOG00000012032-8458.794ENSKMAG00000003105rab33ba8358.794Kryptolebias_marmoratus
ENSXCOG00000012032-10070.539ENSLBEG00000018063-9270.721Labrus_bergylta
ENSXCOG00000012032-9060.294ENSLBEG00000026777rab33ba7962.366Labrus_bergylta
ENSXCOG00000012032-9258.454ENSLACG00000013571RAB33B8758.738Latimeria_chalumnae
ENSXCOG00000012032-9958.036ENSLOCG00000010535rab33ba8759.024Lepisosteus_oculatus
ENSXCOG00000012032-9658.257ENSLAFG00000022351RAB33B8760.194Loxodonta_africana
ENSXCOG00000012032-9258.937ENSMFAG00000003290RAB33B8659.223Macaca_fascicularis
ENSXCOG00000012032-9258.937ENSMMUG00000020692RAB33B8659.223Macaca_mulatta
ENSXCOG00000012032-9159.223ENSMNEG00000024756RAB33B8659.512Macaca_nemestrina
ENSXCOG00000012032-9258.937ENSMLEG00000033393RAB33B8659.223Mandrillus_leucophaeus
ENSXCOG00000012032-9854.008ENSMAMG00000001098rab33ba9054.299Mastacembelus_armatus
ENSXCOG00000012032-9169.955ENSMAMG00000006640-9269.955Mastacembelus_armatus
ENSXCOG00000012032-10073.859ENSMZEG00005011586-9272.973Maylandia_zebra
ENSXCOG00000012032-9154.795ENSMZEG00005001477rab33ba9054.795Maylandia_zebra
ENSXCOG00000012032-9159.223ENSMAUG00000014030Rab33b8659.512Mesocricetus_auratus
ENSXCOG00000012032-9159.709ENSMICG00000034809-8660.000Microcebus_murinus
ENSXCOG00000012032-8362.567ENSMOCG00000019866Rab33b7963.243Microtus_ochrogaster
ENSXCOG00000012032-9175.234ENSMMOG00000006631-9275.234Mola_mola
ENSXCOG00000012032-8561.458ENSMMOG00000017443rab33ba9061.458Mola_mola
ENSXCOG00000012032-9957.080ENSMODG00000000118RAB33B8958.537Monodelphis_domestica
ENSXCOG00000012032-9556.637ENSMALG00000022693rab33ba8457.005Monopterus_albus
ENSXCOG00000012032-9969.008ENSMALG00000021944-8882.653Monopterus_albus
ENSXCOG00000012032-8162.637MGP_CAROLIEiJ_G0024976Rab33b8658.049Mus_caroli
ENSXCOG00000012032-8162.637ENSMUSG00000027739Rab33b8658.049Mus_musculus
ENSXCOG00000012032-9158.252MGP_PahariEiJ_G0026417Rab33b8658.537Mus_pahari
ENSXCOG00000012032-8162.637MGP_SPRETEiJ_G0025911Rab33b8658.049Mus_spretus
ENSXCOG00000012032-9159.709ENSMPUG00000016125RAB33B8660.000Mustela_putorius_furo
ENSXCOG00000012032-9956.195ENSMLUG00000006803RAB33B8159.512Myotis_lucifugus
ENSXCOG00000012032-9158.738ENSNGAG00000015807Rab33b8659.024Nannospalax_galili
ENSXCOG00000012032-8259.585ENSNBRG00000007077rab33ba7459.585Neolamprologus_brichardi
ENSXCOG00000012032-7985.714ENSNBRG00000017996-6786.538Neolamprologus_brichardi
ENSXCOG00000012032-9159.709ENSNLEG00000032616RAB33B8660.000Nomascus_leucogenys
ENSXCOG00000012032-5671.774ENSOPRG00000001073RAB33B7572.358Ochotona_princeps
ENSXCOG00000012032-9260.280ENSODEG00000002979RAB33B8162.434Octodon_degus
ENSXCOG00000012032-9154.795ENSONIG00000011559rab33ba9054.795Oreochromis_niloticus
ENSXCOG00000012032-10073.967ENSONIG00000003367-10078.261Oreochromis_niloticus
ENSXCOG00000012032-8160.870ENSOANG00000015286RAB33B9958.000Ornithorhynchus_anatinus
ENSXCOG00000012032-9155.869ENSORLG00000030109rab33ba8258.673Oryzias_latipes
ENSXCOG00000012032-9173.991ENSORLG00000002071-9273.991Oryzias_latipes
ENSXCOG00000012032-9173.991ENSORLG00020013870-9273.991Oryzias_latipes_hni
ENSXCOG00000012032-9156.338ENSORLG00020018196rab33ba8259.184Oryzias_latipes_hni
ENSXCOG00000012032-9173.991ENSORLG00015013453-9273.991Oryzias_latipes_hsok
ENSXCOG00000012032-9156.338ENSORLG00015012872rab33ba8159.184Oryzias_latipes_hsok
ENSXCOG00000012032-9175.225ENSOMEG00000021726-9275.225Oryzias_melastigma
ENSXCOG00000012032-9055.924ENSOMEG00000019819rab33ba7959.067Oryzias_melastigma
ENSXCOG00000012032-9159.709ENSOGAG00000006778RAB33B8660.000Otolemur_garnettii
ENSXCOG00000012032-9159.709ENSOARG00000013460RAB33B9860.000Ovis_aries
ENSXCOG00000012032-9159.709ENSPPAG00000043376RAB33B8660.000Pan_paniscus
ENSXCOG00000012032-9958.261ENSPPRG00000006119RAB33B8660.000Panthera_pardus
ENSXCOG00000012032-9958.261ENSPTIG00000007518RAB33B8660.000Panthera_tigris_altaica
ENSXCOG00000012032-9159.223ENSPTRG00000016455RAB33B8659.512Pan_troglodytes
ENSXCOG00000012032-9258.937ENSPANG00000014740RAB33B8659.223Papio_anubis
ENSXCOG00000012032-9060.000ENSPKIG00000013084rab33ba8061.828Paramormyrops_kingsleyae
ENSXCOG00000012032-9954.464ENSPKIG00000025682RAB33B9356.585Paramormyrops_kingsleyae
ENSXCOG00000012032-9955.128ENSPMGG00000003514rab33ba8954.839Periophthalmus_magnuspinnatus
ENSXCOG00000012032-10070.485ENSPMGG00000019510-9269.231Periophthalmus_magnuspinnatus
ENSXCOG00000012032-8756.566ENSPMAG00000007247rab33ba7356.906Petromyzon_marinus
ENSXCOG00000012032-9184.163ENSPFOG00000022360-9284.163Poecilia_formosa
ENSXCOG00000012032-9057.143ENSPFOG00000000349rab33ba7859.067Poecilia_formosa
ENSXCOG00000012032-9057.143ENSPLAG00000021278rab33ba7859.067Poecilia_latipinna
ENSXCOG00000012032-9183.710ENSPLAG00000016172-9283.710Poecilia_latipinna
ENSXCOG00000012032-9183.710ENSPMEG00000019646-9283.710Poecilia_mexicana
ENSXCOG00000012032-9057.143ENSPMEG00000022709rab33ba7859.067Poecilia_mexicana
ENSXCOG00000012032-9187.619ENSPREG00000001864-9187.619Poecilia_reticulata
ENSXCOG00000012032-8657.143ENSPREG00000000880rab33ba8058.549Poecilia_reticulata
ENSXCOG00000012032-9159.709ENSPPYG00000015072RAB33B8660.000Pongo_abelii
ENSXCOG00000012032-9157.767ENSPCAG00000010026RAB33B8658.049Procavia_capensis
ENSXCOG00000012032-9159.709ENSPCOG00000014314RAB33B8660.000Propithecus_coquereli
ENSXCOG00000012032-9955.752ENSPVAG00000009586RAB33B8659.024Pteropus_vampyrus
ENSXCOG00000012032-10073.444ENSPNYG00000003511-9273.874Pundamilia_nyererei
ENSXCOG00000012032-9154.795ENSPNYG00000013054rab33ba9054.795Pundamilia_nyererei
ENSXCOG00000012032-8261.856ENSPNAG00000029115rab33ba8561.856Pygocentrus_nattereri
ENSXCOG00000012032-9254.286ENSPNAG00000014146-9654.589Pygocentrus_nattereri
ENSXCOG00000012032-8163.187ENSRNOG00000013035Rab33b8658.537Rattus_norvegicus
ENSXCOG00000012032-9258.937ENSRBIG00000008435RAB33B8659.223Rhinopithecus_bieti
ENSXCOG00000012032-9258.937ENSRROG00000033951RAB33B8659.223Rhinopithecus_roxellana
ENSXCOG00000012032-9258.937ENSSBOG00000028836RAB33B8659.223Saimiri_boliviensis_boliviensis
ENSXCOG00000012032-9156.311ENSSFOG00015020112rab33b9356.311Scleropages_formosus
ENSXCOG00000012032-8160.656ENSSFOG00015024034rab33ba8760.335Scleropages_formosus
ENSXCOG00000012032-10069.547ENSSMAG00000012178-9269.955Scophthalmus_maximus
ENSXCOG00000012032-8958.376ENSSMAG00000015955rab33ba8355.882Scophthalmus_maximus
ENSXCOG00000012032-10072.314ENSSDUG00000019885-9271.749Seriola_dumerili
ENSXCOG00000012032-9953.361ENSSDUG00000001791rab33ba9054.751Seriola_dumerili
ENSXCOG00000012032-9057.576ENSSLDG00000008584rab33ba8260.221Seriola_lalandi_dorsalis
ENSXCOG00000012032-10072.314ENSSLDG00000008070-9271.749Seriola_lalandi_dorsalis
ENSXCOG00000012032-9259.155ENSSARG00000007843RAB33B8161.905Sorex_araneus
ENSXCOG00000012032-9157.282ENSSPUG00000008120RAB33B8657.561Sphenodon_punctatus
ENSXCOG00000012032-9258.333ENSSPAG00000004801rab33ba8159.296Stegastes_partitus
ENSXCOG00000012032-9270.536ENSSPAG00000010224-9073.529Stegastes_partitus
ENSXCOG00000012032-9158.738ENSSSCG00000020711RAB33B8659.024Sus_scrofa
ENSXCOG00000012032-9956.828ENSTGUG00000002436RAB33B8859.223Taeniopygia_guttata
ENSXCOG00000012032-9058.962ENSTRUG00000007036rab33ba7960.000Takifugu_rubripes
ENSXCOG00000012032-9973.451ENSTNIG00000012343-8773.786Tetraodon_nigroviridis
ENSXCOG00000012032-9056.808ENSTNIG00000010125rab33ba8058.163Tetraodon_nigroviridis
ENSXCOG00000012032-9159.709ENSUAMG00000022667RAB33B8660.000Ursus_americanus
ENSXCOG00000012032-9958.261ENSUMAG00000014975RAB33B8860.000Ursus_maritimus
ENSXCOG00000012032-9159.223ENSVVUG00000021440RAB33B8859.512Vulpes_vulpes
ENSXCOG00000012032-8358.065ENSXETG00000016920rab33b7858.470Xenopus_tropicalis
ENSXCOG00000012032-9057.820ENSXMAG00000004153rab33ba7959.794Xiphophorus_maculatus
ENSXCOG00000012032-10090.833ENSXMAG00000023729-10090.833Xiphophorus_maculatus

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