EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000012064 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 1226 bases
Position: chrKQ557220.1:17644765-17645990
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000015967	zf-C2H2	PF00096.26	4.3e-18	1	3
ENSXCOP00000015967	zf-C2H2	PF00096.26	4.3e-18	2	3
ENSXCOP00000015967	zf-C2H2	PF00096.26	4.3e-18	3	3
ENSXCOP00000015967	zf-met	PF12874.7	7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000016166	-	783	-	ENSXCOP00000015967	260 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000012064	-	57	36.735	ENSXCOG00000003001	-	84	36.735
ENSXCOG00000012064	-	50	45.122	ENSXCOG00000006951	-	74	45.122
ENSXCOG00000012064	-	64	44.304	ENSXCOG00000009597	ZNF319	65	44.304
ENSXCOG00000012064	-	65	52.703	ENSXCOG00000003451	-	85	52.703
ENSXCOG00000012064	-	55	50.633	ENSXCOG00000007414	-	90	50.633
ENSXCOG00000012064	-	59	52.632	ENSXCOG00000000354	-	72	52.632
ENSXCOG00000012064	-	60	53.571	ENSXCOG00000015441	-	84	52.439
ENSXCOG00000012064	-	70	46.429	ENSXCOG00000008978	-	95	46.429
ENSXCOG00000012064	-	50	50.649	ENSXCOG00000010567	-	96	48.052
ENSXCOG00000012064	-	75	52.632	ENSXCOG00000017328	-	96	52.632
ENSXCOG00000012064	-	66	49.351	ENSXCOG00000012921	-	95	46.341
ENSXCOG00000012064	-	67	50.000	ENSXCOG00000019492	-	87	51.220
ENSXCOG00000012064	-	60	48.780	ENSXCOG00000002898	-	88	48.780
ENSXCOG00000012064	-	55	48.052	ENSXCOG00000007981	-	82	48.052
ENSXCOG00000012064	-	60	46.753	ENSXCOG00000003093	-	95	46.753
ENSXCOG00000012064	-	93	51.220	ENSXCOG00000007957	-	83	51.220
ENSXCOG00000012064	-	89	54.878	ENSXCOG00000014363	-	97	54.878
ENSXCOG00000012064	-	67	51.562	ENSXCOG00000013870	-	72	51.562
ENSXCOG00000012064	-	65	42.683	ENSXCOG00000019377	-	91	42.683
ENSXCOG00000012064	-	55	48.148	ENSXCOG00000009798	-	67	48.148
ENSXCOG00000012064	-	73	52.564	ENSXCOG00000009665	-	92	52.564
ENSXCOG00000012064	-	56	53.247	ENSXCOG00000019401	-	72	53.247
ENSXCOG00000012064	-	71	51.667	ENSXCOG00000003499	-	71	51.667
ENSXCOG00000012064	-	69	46.875	ENSXCOG00000019484	-	93	44.048
ENSXCOG00000012064	-	70	50.000	ENSXCOG00000019482	-	90	50.000
ENSXCOG00000012064	-	62	50.847	ENSXCOG00000003484	-	76	50.847
ENSXCOG00000012064	-	83	50.877	ENSXCOG00000001116	-	95	52.632
ENSXCOG00000012064	-	53	50.000	ENSXCOG00000019457	-	85	50.000
ENSXCOG00000012064	-	57	53.659	ENSXCOG00000009003	-	90	53.659
ENSXCOG00000012064	-	50	50.847	ENSXCOG00000000528	-	81	50.847
ENSXCOG00000012064	-	60	53.030	ENSXCOG00000008062	-	93	50.000
ENSXCOG00000012064	-	56	54.688	ENSXCOG00000002857	-	91	54.688
ENSXCOG00000012064	-	53	50.980	ENSXCOG00000001200	-	86	52.439
ENSXCOG00000012064	-	57	51.923	ENSXCOG00000002473	-	88	51.923
ENSXCOG00000012064	-	53	51.220	ENSXCOG00000019382	-	81	51.220
ENSXCOG00000012064	-	79	42.683	ENSXCOG00000009768	-	76	42.683
ENSXCOG00000012064	-	68	51.948	ENSXCOG00000007406	-	99	54.430
ENSXCOG00000012064	-	50	48.276	ENSXCOG00000011725	-	96	48.276
ENSXCOG00000012064	-	59	51.389	ENSXCOG00000016860	-	99	53.333
ENSXCOG00000012064	-	58	50.877	ENSXCOG00000003538	-	97	50.877
ENSXCOG00000012064	-	60	54.000	ENSXCOG00000003530	-	92	54.000
ENSXCOG00000012064	-	57	48.052	ENSXCOG00000003472	-	98	45.455
ENSXCOG00000012064	-	55	46.341	ENSXCOG00000006614	-	92	46.835
ENSXCOG00000012064	-	59	48.780	ENSXCOG00000013004	-	72	48.780
ENSXCOG00000012064	-	55	51.613	ENSXCOG00000008083	-	90	48.101
ENSXCOG00000012064	-	62	55.844	ENSXCOG00000016307	-	82	59.259
ENSXCOG00000012064	-	59	54.878	ENSXCOG00000007994	-	89	55.844

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012064	-	59	45.679	ENSACIG00000006228	-	91	45.679	Amphilophus_citrinellus
ENSXCOG00000012064	-	53	53.165	ENSAOCG00000022836	-	54	53.165	Amphiprion_ocellaris
ENSXCOG00000012064	-	53	53.165	ENSAPEG00000003776	-	54	53.165	Amphiprion_percula
ENSXCOG00000012064	-	61	48.101	ENSATEG00000022064	-	91	50.633	Anabas_testudineus
ENSXCOG00000012064	-	60	50.704	ENSATEG00000014684	-	88	51.899	Anabas_testudineus
ENSXCOG00000012064	-	56	53.247	ENSACLG00000019349	-	67	53.247	Astatotilapia_calliptera
ENSXCOG00000012064	-	56	48.235	ENSACLG00000014365	-	97	48.235	Astatotilapia_calliptera
ENSXCOG00000012064	-	55	51.220	ENSAMXG00000007973	-	83	51.220	Astyanax_mexicanus
ENSXCOG00000012064	-	62	50.617	ENSAMXG00000034934	-	93	50.617	Astyanax_mexicanus
ENSXCOG00000012064	-	53	47.273	ENSHBUG00000020544	-	84	47.273	Haplochromis_burtoni
ENSXCOG00000012064	-	56	50.633	ENSIPUG00000022266	ZNF135	70	50.633	Ictalurus_punctatus
ENSXCOG00000012064	-	54	58.491	ENSLBEG00000026457	-	90	58.491	Labrus_bergylta
ENSXCOG00000012064	-	69	45.000	ENSLOCG00000017422	-	78	45.000	Lepisosteus_oculatus
ENSXCOG00000012064	-	56	48.485	ENSMZEG00005025006	-	88	48.485	Maylandia_zebra
ENSXCOG00000012064	-	53	48.780	ENSMZEG00005027551	-	73	48.780	Maylandia_zebra
ENSXCOG00000012064	-	64	45.763	ENSMALG00000010959	-	88	52.830	Monopterus_albus
ENSXCOG00000012064	-	60	53.165	ENSNBRG00000016639	-	58	53.165	Neolamprologus_brichardi
ENSXCOG00000012064	-	53	51.064	ENSONIG00000001986	-	94	51.064	Oreochromis_niloticus
ENSXCOG00000012064	-	57	56.962	ENSOMEG00000015179	-	65	56.962	Oryzias_melastigma
ENSXCOG00000012064	-	50	55.696	ENSPKIG00000015951	-	68	55.696	Paramormyrops_kingsleyae
ENSXCOG00000012064	-	59	52.439	ENSPMEG00000022651	-	64	52.439	Poecilia_mexicana
ENSXCOG00000012064	-	74	52.439	ENSPNAG00000011660	-	68	52.439	Pygocentrus_nattereri
ENSXCOG00000012064	-	58	52.439	ENSSFOG00015006083	-	61	52.439	Scleropages_formosus
ENSXCOG00000012064	-	54	55.319	ENSSMAG00000013663	-	92	52.500	Scophthalmus_maximus
ENSXCOG00000012064	-	56	45.882	ENSSPAG00000008950	-	57	45.882	Stegastes_partitus
ENSXCOG00000012064	-	57	45.545	ENSSPAG00000007403	-	86	56.098	Stegastes_partitus
ENSXCOG00000012064	-	66	32.164	ENSTRUG00000024009	-	59	32.164	Takifugu_rubripes
ENSXCOG00000012064	-	65	38.095	ENSTRUG00000021167	-	57	38.095	Takifugu_rubripes
ENSXCOG00000012064	-	87	96.889	ENSXMAG00000025564	-	63	96.889	Xiphophorus_maculatus
ENSXCOG00000012064	-	71	52.439	ENSXMAG00000024973	-	79	52.439	Xiphophorus_maculatus