EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000012075 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5895 bases
Position: chrKQ557225.1:51307305-51313199
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000015985	RVT_1	PF00078.27	4.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000016184	-	1176	-	ENSXCOP00000015985	391 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012075's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000012075	-	72	33.922	ENSXCOG00000016894	-	84	33.922

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012075	-	70	38.909	ENSACLG00000006900	-	76	38.909	Astatotilapia_calliptera
ENSXCOG00000012075	-	79	30.887	ENSDARG00000086849	si:dkey-187k19.2	57	30.887	Danio_rerio
ENSXCOG00000012075	-	51	39.881	ENSEBUG00000005774	-	70	39.881	Eptatretus_burgeri
ENSXCOG00000012075	-	80	41.104	ENSHBUG00000020868	-	80	41.104	Haplochromis_burtoni
ENSXCOG00000012075	-	65	39.033	ENSKMAG00000007124	-	55	39.033	Kryptolebias_marmoratus
ENSXCOG00000012075	-	69	38.376	ENSLBEG00000018239	-	91	38.376	Labrus_bergylta
ENSXCOG00000012075	-	56	32.129	ENSLOCG00000000597	-	54	32.129	Lepisosteus_oculatus
ENSXCOG00000012075	-	65	44.815	ENSLOCG00000018030	-	76	44.815	Lepisosteus_oculatus
ENSXCOG00000012075	-	58	34.483	ENSLOCG00000017441	-	68	34.483	Lepisosteus_oculatus
ENSXCOG00000012075	-	56	31.330	ENSONIG00000020426	-	66	31.330	Oreochromis_niloticus
ENSXCOG00000012075	-	87	37.772	ENSORLG00000029559	-	90	37.772	Oryzias_latipes
ENSXCOG00000012075	-	57	33.624	ENSORLG00000029764	-	87	33.624	Oryzias_latipes
ENSXCOG00000012075	-	84	61.494	ENSPLAG00000021304	-	83	61.494	Poecilia_latipinna
ENSXCOG00000012075	-	75	67.961	ENSPMEG00000005418	-	81	67.961	Poecilia_mexicana
ENSXCOG00000012075	-	84	61.207	ENSPMEG00000021732	-	85	61.207	Poecilia_mexicana
ENSXCOG00000012075	-	73	34.495	ENSSFOG00015015726	-	92	34.495	Scleropages_formosus
ENSXCOG00000012075	-	68	39.773	ENSSLDG00000000237	-	95	37.710	Seriola_lalandi_dorsalis
ENSXCOG00000012075	-	52	35.122	ENSTNIG00000000750	-	68	35.122	Tetraodon_nigroviridis
ENSXCOG00000012075	-	88	65.374	ENSXMAG00000020872	-	79	65.374	Xiphophorus_maculatus
ENSXCOG00000012075	-	88	65.374	ENSXMAG00000028317	-	79	65.374	Xiphophorus_maculatus