EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000012082 (Gene tree)
Gene ID: -
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 11417 bases
Position: chrKQ557215.1:13305047-13316463
Accession: ZDB-GENE-050706-182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000015998	NUC173	PF08161.12	1.1e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000016197	-	3591	-	ENSXCOP00000015998	1196 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012082's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012082	rrp12	89	76.316	ENSG00000052749	RRP12	100	77.273	Homo_sapiens
ENSXCOG00000012082	rrp12	97	86.889	ENSAPOG00000013355	rrp12	90	86.426	Acanthochromis_polyacanthus
ENSXCOG00000012082	rrp12	97	65.491	ENSAMEG00000000134	RRP12	89	65.491	Ailuropoda_melanoleuca
ENSXCOG00000012082	rrp12	96	86.840	ENSACIG00000022673	rrp12	90	86.512	Amphilophus_citrinellus
ENSXCOG00000012082	rrp12	97	87.361	ENSAOCG00000016149	rrp12	90	87.543	Amphiprion_ocellaris
ENSXCOG00000012082	rrp12	97	86.975	ENSAPEG00000016023	rrp12	90	86.942	Amphiprion_percula
ENSXCOG00000012082	rrp12	97	85.068	ENSATEG00000022627	rrp12	90	85.198	Anabas_testudineus
ENSXCOG00000012082	rrp12	94	61.239	ENSAPLG00000014387	RRP12	89	61.156	Anas_platyrhynchos
ENSXCOG00000012082	rrp12	96	60.017	ENSACAG00000002175	RRP12	90	59.726	Anolis_carolinensis
ENSXCOG00000012082	rrp12	89	75.658	ENSANAG00000037485	RRP12	91	64.876	Aotus_nancymaae
ENSXCOG00000012082	rrp12	99	80.000	ENSACLG00000007354	rrp12	91	84.251	Astatotilapia_calliptera
ENSXCOG00000012082	rrp12	96	75.152	ENSAMXG00000012852	rrp12	90	75.259	Astyanax_mexicanus
ENSXCOG00000012082	rrp12	99	63.264	ENSBTAG00000002191	RRP12	90	64.384	Bos_taurus
ENSXCOG00000012082	rrp12	81	62.462	ENSCJAG00000016549	-	88	62.925	Callithrix_jacchus
ENSXCOG00000012082	rrp12	98	64.601	ENSCAFG00000009043	RRP12	89	65.292	Canis_familiaris
ENSXCOG00000012082	rrp12	98	64.601	ENSCAFG00020005991	RRP12	89	65.292	Canis_lupus_dingo
ENSXCOG00000012082	rrp12	97	64.225	ENSCHIG00000011876	RRP12	90	64.109	Capra_hircus
ENSXCOG00000012082	rrp12	93	59.087	ENSCAPG00000008991	RRP12	88	58.997	Cavia_aperea
ENSXCOG00000012082	rrp12	97	64.691	ENSCPOG00000004215	RRP12	90	64.691	Cavia_porcellus
ENSXCOG00000012082	rrp12	76	66.963	ENSCCAG00000024088	RRP12	86	67.939	Cebus_capucinus
ENSXCOG00000012082	rrp12	65	59.292	ENSCCAG00000033123	-	71	60.128	Cebus_capucinus
ENSXCOG00000012082	rrp12	97	61.426	ENSCATG00000045310	RRP12	89	61.407	Cercocebus_atys
ENSXCOG00000012082	rrp12	97	64.103	ENSCLAG00000003753	RRP12	90	64.519	Chinchilla_lanigera
ENSXCOG00000012082	rrp12	84	64.024	ENSCSAG00000005877	RRP12	88	63.744	Chlorocebus_sabaeus
ENSXCOG00000012082	rrp12	56	71.381	ENSCHOG00000003095	-	53	71.381	Choloepus_hoffmanni
ENSXCOG00000012082	rrp12	93	66.116	ENSCPBG00000011935	RRP12	87	66.236	Chrysemys_picta_bellii
ENSXCOG00000012082	rrp12	60	39.313	ENSCSAVG00000006059	-	95	39.186	Ciona_savignyi
ENSXCOG00000012082	rrp12	88	76.316	ENSCANG00000031653	RRP12	90	65.609	Colobus_angolensis_palliatus
ENSXCOG00000012082	rrp12	89	63.104	ENSCGRG00001004338	Rrp12	89	64.875	Cricetulus_griseus_chok1gshd
ENSXCOG00000012082	rrp12	99	62.802	ENSCGRG00000011965	Rrp12	90	64.378	Cricetulus_griseus_crigri
ENSXCOG00000012082	rrp12	96	82.496	ENSCSEG00000007799	rrp12	90	82.515	Cynoglossus_semilaevis
ENSXCOG00000012082	rrp12	99	91.360	ENSCVAG00000003418	rrp12	90	91.660	Cyprinodon_variegatus
ENSXCOG00000012082	rrp12	99	69.675	ENSDARG00000022410	rrp12	90	74.224	Danio_rerio
ENSXCOG00000012082	rrp12	99	60.897	ENSDNOG00000005120	RRP12	90	65.236	Dasypus_novemcinctus
ENSXCOG00000012082	rrp12	96	65.315	ENSDORG00000009199	Rrp12	90	65.325	Dipodomys_ordii
ENSXCOG00000012082	rrp12	88	67.143	ENSETEG00000002455	RRP12	82	67.143	Echinops_telfairi
ENSXCOG00000012082	rrp12	92	50.413	ENSEBUG00000006555	rrp12	95	50.000	Eptatretus_burgeri
ENSXCOG00000012082	rrp12	97	65.034	ENSEASG00005008693	RRP12	90	65.266	Equus_asinus_asinus
ENSXCOG00000012082	rrp12	97	62.629	ENSECAG00000010892	RRP12	89	65.074	Equus_caballus
ENSXCOG00000012082	rrp12	64	52.995	ENSEEUG00000005447	-	55	58.235	Erinaceus_europaeus
ENSXCOG00000012082	rrp12	99	76.877	ENSELUG00000010510	rrp12	98	75.082	Esox_lucius
ENSXCOG00000012082	rrp12	90	76.316	ENSFCAG00000028639	RRP12	89	65.636	Felis_catus
ENSXCOG00000012082	rrp12	93	60.304	ENSFALG00000008458	RRP12	89	63.922	Ficedula_albicollis
ENSXCOG00000012082	rrp12	97	64.359	ENSFDAG00000019108	RRP12	86	64.691	Fukomys_damarensis
ENSXCOG00000012082	rrp12	99	77.414	ENSFHEG00000004148	rrp12	90	81.014	Fundulus_heteroclitus
ENSXCOG00000012082	rrp12	93	80.257	ENSGMOG00000004188	rrp12	86	80.257	Gadus_morhua
ENSXCOG00000012082	rrp12	99	63.727	ENSGALG00000041331	RRP12	95	64.888	Gallus_gallus
ENSXCOG00000012082	rrp12	97	96.481	ENSGAFG00000009038	rrp12	92	95.389	Gambusia_affinis
ENSXCOG00000012082	rrp12	100	81.146	ENSGACG00000007175	rrp12	90	83.333	Gasterosteus_aculeatus
ENSXCOG00000012082	rrp12	72	67.512	ENSGAGG00000019169	RRP12	96	67.512	Gopherus_agassizii
ENSXCOG00000012082	rrp12	89	76.316	ENSGGOG00000014850	RRP12	90	65.523	Gorilla_gorilla
ENSXCOG00000012082	rrp12	96	85.182	ENSHBUG00000023527	rrp12	90	84.708	Haplochromis_burtoni
ENSXCOG00000012082	rrp12	97	64.872	ENSHGLG00000016772	RRP12	90	65.236	Heterocephalus_glaber_female
ENSXCOG00000012082	rrp12	97	64.872	ENSHGLG00100015110	RRP12	90	65.236	Heterocephalus_glaber_male
ENSXCOG00000012082	rrp12	99	78.029	ENSHCOG00000019519	rrp12	92	80.981	Hippocampus_comes
ENSXCOG00000012082	rrp12	99	73.317	ENSIPUG00000000311	RRP12	98	73.234	Ictalurus_punctatus
ENSXCOG00000012082	rrp12	96	65.484	ENSSTOG00000006515	RRP12	90	65.266	Ictidomys_tridecemlineatus
ENSXCOG00000012082	rrp12	96	64.114	ENSJJAG00000000110	Rrp12	88	64.522	Jaculus_jaculus
ENSXCOG00000012082	rrp12	96	87.706	ENSKMAG00000020621	rrp12	98	83.495	Kryptolebias_marmoratus
ENSXCOG00000012082	rrp12	99	78.698	ENSLBEG00000015335	rrp12	91	82.131	Labrus_bergylta
ENSXCOG00000012082	rrp12	71	64.419	ENSLACG00000016633	RRP12	75	64.419	Latimeria_chalumnae
ENSXCOG00000012082	rrp12	97	69.492	ENSLOCG00000003846	rrp12	90	69.617	Lepisosteus_oculatus
ENSXCOG00000012082	rrp12	100	63.726	ENSLAFG00000015965	RRP12	89	65.408	Loxodonta_africana
ENSXCOG00000012082	rrp12	88	75.658	ENSMFAG00000041558	RRP12	90	65.523	Macaca_fascicularis
ENSXCOG00000012082	rrp12	88	75.658	ENSMMUG00000019634	RRP12	90	65.523	Macaca_mulatta
ENSXCOG00000012082	rrp12	88	75.658	ENSMNEG00000036759	RRP12	89	62.521	Macaca_nemestrina
ENSXCOG00000012082	rrp12	88	76.316	ENSMLEG00000041317	RRP12	90	61.835	Mandrillus_leucophaeus
ENSXCOG00000012082	rrp12	99	83.662	ENSMAMG00000002964	rrp12	98	83.662	Mastacembelus_armatus
ENSXCOG00000012082	rrp12	97	84.351	ENSMZEG00005003241	rrp12	90	84.364	Maylandia_zebra
ENSXCOG00000012082	rrp12	99	58.995	ENSMGAG00000009829	RRP12	90	62.639	Meleagris_gallopavo
ENSXCOG00000012082	rrp12	98	64.189	ENSMAUG00000020743	Rrp12	91	64.635	Mesocricetus_auratus
ENSXCOG00000012082	rrp12	97	65.073	ENSMICG00000007624	RRP12	90	65.236	Microcebus_murinus
ENSXCOG00000012082	rrp12	97	64.701	ENSMOCG00000006753	Rrp12	90	65.150	Microtus_ochrogaster
ENSXCOG00000012082	rrp12	99	79.485	ENSMMOG00000010708	rrp12	91	82.631	Mola_mola
ENSXCOG00000012082	rrp12	99	61.636	ENSMODG00000004315	RRP12	90	65.345	Monodelphis_domestica
ENSXCOG00000012082	rrp12	97	84.287	ENSMALG00000016560	rrp12	98	84.364	Monopterus_albus
ENSXCOG00000012082	rrp12	97	64.701	MGP_CAROLIEiJ_G0022957	Rrp12	89	64.948	Mus_caroli
ENSXCOG00000012082	rrp12	97	64.872	ENSMUSG00000035049	Rrp12	90	65.120	Mus_musculus
ENSXCOG00000012082	rrp12	99	61.484	MGP_PahariEiJ_G0014447	Rrp12	90	65.206	Mus_pahari
ENSXCOG00000012082	rrp12	97	64.957	MGP_SPRETEiJ_G0023878	Rrp12	90	65.206	Mus_spretus
ENSXCOG00000012082	rrp12	97	65.030	ENSMPUG00000017046	RRP12	89	65.030	Mustela_putorius_furo
ENSXCOG00000012082	rrp12	99	64.107	ENSMLUG00000017160	RRP12	89	65.404	Myotis_lucifugus
ENSXCOG00000012082	rrp12	97	65.214	ENSNGAG00000024144	Rrp12	90	65.408	Nannospalax_galili
ENSXCOG00000012082	rrp12	99	80.902	ENSNBRG00000009987	rrp12	98	81.305	Neolamprologus_brichardi
ENSXCOG00000012082	rrp12	97	57.387	ENSNLEG00000013762	RRP12	89	57.646	Nomascus_leucogenys
ENSXCOG00000012082	rrp12	99	55.812	ENSMEUG00000003185	RRP12	90	59.071	Notamacropus_eugenii
ENSXCOG00000012082	rrp12	90	67.388	ENSOPRG00000005001	RRP12	84	67.388	Ochotona_princeps
ENSXCOG00000012082	rrp12	99	60.859	ENSODEG00000016439	RRP12	90	64.322	Octodon_degus
ENSXCOG00000012082	rrp12	96	85.789	ENSONIG00000009528	rrp12	90	85.309	Oreochromis_niloticus
ENSXCOG00000012082	rrp12	99	57.820	ENSOANG00000006560	RRP12	90	60.978	Ornithorhynchus_anatinus
ENSXCOG00000012082	rrp12	96	65.311	ENSOCUG00000005662	RRP12	90	65.378	Oryctolagus_cuniculus
ENSXCOG00000012082	rrp12	97	84.202	ENSORLG00000008688	rrp12	98	84.450	Oryzias_latipes
ENSXCOG00000012082	rrp12	97	84.714	ENSORLG00020002355	rrp12	93	84.880	Oryzias_latipes_hni
ENSXCOG00000012082	rrp12	97	84.202	ENSORLG00015006709	rrp12	90	84.450	Oryzias_latipes_hsok
ENSXCOG00000012082	rrp12	97	84.629	ENSOMEG00000002609	rrp12	91	84.880	Oryzias_melastigma
ENSXCOG00000012082	rrp12	99	64.594	ENSOGAG00000001626	RRP12	90	64.494	Otolemur_garnettii
ENSXCOG00000012082	rrp12	98	63.390	ENSOARG00000009681	RRP12	90	63.559	Ovis_aries
ENSXCOG00000012082	rrp12	90	76.316	ENSPPAG00000043885	RRP12	90	63.894	Pan_paniscus
ENSXCOG00000012082	rrp12	90	75.658	ENSPPRG00000002029	RRP12	89	65.464	Panthera_pardus
ENSXCOG00000012082	rrp12	90	76.316	ENSPTIG00000004428	RRP12	88	62.541	Panthera_tigris_altaica
ENSXCOG00000012082	rrp12	90	76.316	ENSPTRG00000002806	RRP12	90	63.979	Pan_troglodytes
ENSXCOG00000012082	rrp12	88	76.316	ENSPANG00000021360	RRP12	90	65.609	Papio_anubis
ENSXCOG00000012082	rrp12	97	72.472	ENSPKIG00000016516	rrp12	92	71.979	Paramormyrops_kingsleyae
ENSXCOG00000012082	rrp12	99	76.819	ENSPMGG00000020217	rrp12	90	80.756	Periophthalmus_magnuspinnatus
ENSXCOG00000012082	rrp12	97	65.128	ENSPEMG00000008437	Rrp12	90	65.378	Peromyscus_maniculatus_bairdii
ENSXCOG00000012082	rrp12	81	64.516	ENSPMAG00000007493	rrp12	71	56.033	Petromyzon_marinus
ENSXCOG00000012082	rrp12	99	60.987	ENSPCIG00000002157	RRP12	94	60.837	Phascolarctos_cinereus
ENSXCOG00000012082	rrp12	97	95.193	ENSPFOG00000014975	rrp12	90	95.185	Poecilia_formosa
ENSXCOG00000012082	rrp12	97	95.021	ENSPLAG00000009840	rrp12	90	95.013	Poecilia_latipinna
ENSXCOG00000012082	rrp12	97	95.193	ENSPMEG00000021871	rrp12	90	95.185	Poecilia_mexicana
ENSXCOG00000012082	rrp12	97	93.851	ENSPREG00000020950	rrp12	91	93.921	Poecilia_reticulata
ENSXCOG00000012082	rrp12	97	64.420	ENSPPYG00000002528	RRP12	90	64.580	Pongo_abelii
ENSXCOG00000012082	rrp12	93	77.966	ENSPCAG00000008967	RRP12	84	77.966	Procavia_capensis
ENSXCOG00000012082	rrp12	99	76.974	ENSPCOG00000014009	RRP12	90	65.633	Propithecus_coquereli
ENSXCOG00000012082	rrp12	98	62.298	ENSPVAG00000003370	RRP12	89	62.759	Pteropus_vampyrus
ENSXCOG00000012082	rrp12	97	84.721	ENSPNYG00000009451	rrp12	91	84.682	Pundamilia_nyererei
ENSXCOG00000012082	rrp12	96	76.256	ENSPNAG00000007658	rrp12	98	71.074	Pygocentrus_nattereri
ENSXCOG00000012082	rrp12	99	61.295	ENSRNOG00000048495	Rrp12	90	64.948	Rattus_norvegicus
ENSXCOG00000012082	rrp12	88	76.316	ENSRBIG00000021296	RRP12	91	65.437	Rhinopithecus_bieti
ENSXCOG00000012082	rrp12	88	76.316	ENSRROG00000032482	RRP12	90	65.437	Rhinopithecus_roxellana
ENSXCOG00000012082	rrp12	89	75.000	ENSSBOG00000030992	RRP12	89	75.000	Saimiri_boliviensis_boliviensis
ENSXCOG00000012082	rrp12	99	64.243	ENSSHAG00000018275	RRP12	90	64.721	Sarcophilus_harrisii
ENSXCOG00000012082	rrp12	97	75.000	ENSSFOG00015016400	rrp12	90	75.258	Scleropages_formosus
ENSXCOG00000012082	rrp12	96	84.735	ENSSMAG00000004047	rrp12	90	84.523	Scophthalmus_maximus
ENSXCOG00000012082	rrp12	97	86.325	ENSSDUG00000022871	rrp12	98	83.117	Seriola_dumerili
ENSXCOG00000012082	rrp12	97	86.068	ENSSLDG00000003038	rrp12	90	86.328	Seriola_lalandi_dorsalis
ENSXCOG00000012082	rrp12	99	58.786	ENSSPUG00000012221	RRP12	90	62.264	Sphenodon_punctatus
ENSXCOG00000012082	rrp12	97	86.763	ENSSPAG00000002261	rrp12	98	84.036	Stegastes_partitus
ENSXCOG00000012082	rrp12	97	64.341	ENSSSCG00000010514	RRP12	90	64.341	Sus_scrofa
ENSXCOG00000012082	rrp12	84	61.370	ENSTGUG00000009711	RRP12	89	60.908	Taeniopygia_guttata
ENSXCOG00000012082	rrp12	97	78.066	ENSTRUG00000012017	rrp12	90	77.807	Takifugu_rubripes
ENSXCOG00000012082	rrp12	96	83.536	ENSTNIG00000016522	rrp12	90	83.290	Tetraodon_nigroviridis
ENSXCOG00000012082	rrp12	73	74.020	ENSTBEG00000004907	RRP12	70	74.020	Tupaia_belangeri
ENSXCOG00000012082	rrp12	97	62.629	ENSTTRG00000009878	RRP12	90	62.521	Tursiops_truncatus
ENSXCOG00000012082	rrp12	97	65.778	ENSUAMG00000009092	RRP12	91	65.434	Ursus_americanus
ENSXCOG00000012082	rrp12	97	63.972	ENSUMAG00000021621	RRP12	91	63.519	Ursus_maritimus
ENSXCOG00000012082	rrp12	98	64.601	ENSVVUG00000023168	RRP12	90	65.292	Vulpes_vulpes
ENSXCOG00000012082	rrp12	99	66.695	ENSXETG00000003430	rrp12	90	66.667	Xenopus_tropicalis
ENSXCOG00000012082	rrp12	97	97.854	ENSXMAG00000013498	rrp12	98	93.614	Xiphophorus_maculatus