EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000012134 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: im:7148817|mucMS2
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 4355 bases
Position: chrKQ557225.1:51792733-51797087
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000016058	RRM_1	PF00076.22	9.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000016261	-	279	-	ENSXCOP00000016058	92 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012134's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000012134	-	78	34.722	ENSXCOG00000008477	sf3b6	54	34.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012134	-	87	57.317	ENSG00000077312	SNRPA	94	57.317	Homo_sapiens
ENSXCOG00000012134	-	80	80.263	ENSAPOG00000015161	snrpb2	80	80.519	Acanthochromis_polyacanthus
ENSXCOG00000012134	-	80	80.263	ENSAPOG00000014688	-	80	80.519	Acanthochromis_polyacanthus
ENSXCOG00000012134	-	87	56.098	ENSCJAG00000045570	-	88	56.098	Callithrix_jacchus
ENSXCOG00000012134	-	87	53.659	ENSCAFG00000031370	-	50	53.659	Canis_familiaris
ENSXCOG00000012134	-	87	57.317	ENSCAFG00020017913	-	85	57.317	Canis_lupus_dingo
ENSXCOG00000012134	-	87	53.659	ENSCAFG00020024265	-	74	48.352	Canis_lupus_dingo
ENSXCOG00000012134	-	93	54.545	ENSCAFG00020014898	SNRPA	90	54.545	Canis_lupus_dingo
ENSXCOG00000012134	-	79	66.667	ENSCAFG00020011358	-	85	66.667	Canis_lupus_dingo
ENSXCOG00000012134	-	87	57.317	ENSCATG00000032716	SNRPA	85	57.317	Cercocebus_atys
ENSXCOG00000012134	-	96	54.444	ENSCANG00000038637	SNRPA	92	54.444	Colobus_angolensis_palliatus
ENSXCOG00000012134	-	88	57.831	ENSMFAG00000041710	SNRPA	85	57.317	Macaca_fascicularis
ENSXCOG00000012134	-	89	57.143	ENSMMUG00000022024	SNRPA	88	57.143	Macaca_mulatta
ENSXCOG00000012134	-	87	57.317	ENSMLEG00000039593	SNRPA	85	57.317	Mandrillus_leucophaeus
ENSXCOG00000012134	-	95	51.064	ENSODEG00000000626	-	95	51.064	Octodon_degus
ENSXCOG00000012134	-	87	57.317	ENSPANG00000023874	SNRPA	85	57.317	Papio_anubis
ENSXCOG00000012134	-	88	57.831	ENSPCOG00000025196	SNRPA	83	57.831	Propithecus_coquereli
ENSXCOG00000012134	-	96	54.444	ENSRBIG00000008335	SNRPA	92	54.444	Rhinopithecus_bieti
ENSXCOG00000012134	-	88	57.831	ENSRROG00000042727	SNRPA	85	57.831	Rhinopithecus_roxellana
ENSXCOG00000012134	-	82	36.364	YIR009W	MSL1	68	36.364	Saccharomyces_cerevisiae
ENSXCOG00000012134	-	87	57.317	ENSSBOG00000034722	SNRPA	59	57.317	Saimiri_boliviensis_boliviensis
ENSXCOG00000012134	-	88	56.627	ENSUAMG00000003002	-	90	56.627	Ursus_americanus
ENSXCOG00000012134	-	75	63.768	ENSUMAG00000000069	-	52	63.768	Ursus_maritimus
ENSXCOG00000012134	-	93	54.545	ENSVVUG00000005647	SNRPA	90	54.545	Vulpes_vulpes
ENSXCOG00000012134	-	87	54.878	ENSVVUG00000014183	-	70	56.410	Vulpes_vulpes