EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000012281 (Gene tree)
Gene ID: -
Gene Symbol: zgc:123010
Alias: fk11h08|wu:fk11h08
Full Name: zgc:123010
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 4468 bases
Position: chrKQ557215.1:14023736-14028203
Accession: ZDB-GENE-051120-15
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000016248	RRM_1	PF00076.22	1.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000016454	-	1293	-	ENSXCOP00000016248	430 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012281's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012281	zgc:123010	77	33.594	ENSAPOG00000005058	si:dkey-33c12.4	52	33.146	Acanthochromis_polyacanthus
ENSXCOG00000012281	zgc:123010	70	54.459	ENSAPOG00000001034	-	72	54.459	Acanthochromis_polyacanthus
ENSXCOG00000012281	zgc:123010	91	74.687	ENSAPOG00000019633	zgc:123010	73	74.687	Acanthochromis_polyacanthus
ENSXCOG00000012281	zgc:123010	83	78.415	ENSACIG00000021684	zgc:123010	89	78.415	Amphilophus_citrinellus
ENSXCOG00000012281	zgc:123010	83	80.109	ENSAOCG00000005910	zgc:123010	69	79.301	Amphiprion_ocellaris
ENSXCOG00000012281	zgc:123010	72	32.768	ENSAOCG00000020066	si:dkey-33c12.4	50	32.584	Amphiprion_ocellaris
ENSXCOG00000012281	zgc:123010	83	80.109	ENSAPEG00000014305	zgc:123010	74	79.301	Amphiprion_percula
ENSXCOG00000012281	zgc:123010	83	55.014	ENSATEG00000022160	-	71	55.014	Anabas_testudineus
ENSXCOG00000012281	zgc:123010	83	78.747	ENSATEG00000001220	zgc:123010	69	77.957	Anabas_testudineus
ENSXCOG00000012281	zgc:123010	72	33.618	ENSATEG00000018885	si:dkey-33c12.4	51	33.618	Anabas_testudineus
ENSXCOG00000012281	zgc:123010	52	40.529	ENSAPLG00000013566	-	100	40.529	Anas_platyrhynchos
ENSXCOG00000012281	zgc:123010	83	79.235	ENSACLG00000010188	zgc:123010	71	78.437	Astatotilapia_calliptera
ENSXCOG00000012281	zgc:123010	83	53.562	ENSACLG00000012346	-	71	53.298	Astatotilapia_calliptera
ENSXCOG00000012281	zgc:123010	72	31.635	ENSACLG00000014192	si:dkey-33c12.4	56	31.383	Astatotilapia_calliptera
ENSXCOG00000012281	zgc:123010	83	69.459	ENSAMXG00000041967	zgc:123010	67	69.459	Astyanax_mexicanus
ENSXCOG00000012281	zgc:123010	78	34.078	ENSAMXG00000010871	si:dkey-33c12.4	56	34.078	Astyanax_mexicanus
ENSXCOG00000012281	zgc:123010	72	32.329	ENSCPBG00000024454	-	59	30.588	Chrysemys_picta_bellii
ENSXCOG00000012281	zgc:123010	91	80.402	ENSCVAG00000013288	zgc:123010	74	80.402	Cyprinodon_variegatus
ENSXCOG00000012281	zgc:123010	72	33.989	ENSCVAG00000006564	-	61	31.643	Cyprinodon_variegatus
ENSXCOG00000012281	zgc:123010	83	65.312	ENSDARG00000039082	zgc:123010	72	65.312	Danio_rerio
ENSXCOG00000012281	zgc:123010	73	35.756	ENSDARG00000057890	si:dkey-33c12.4	71	30.426	Danio_rerio
ENSXCOG00000012281	zgc:123010	67	35.714	ENSEBUG00000001368	-	55	37.461	Eptatretus_burgeri
ENSXCOG00000012281	zgc:123010	83	71.081	ENSELUG00000022008	zgc:123010	87	67.473	Esox_lucius
ENSXCOG00000012281	zgc:123010	83	59.249	ENSELUG00000021447	-	72	59.249	Esox_lucius
ENSXCOG00000012281	zgc:123010	72	34.302	ENSELUG00000002009	si:dkey-33c12.4	88	34.385	Esox_lucius
ENSXCOG00000012281	zgc:123010	57	33.585	ENSFALG00000008867	-	99	33.585	Ficedula_albicollis
ENSXCOG00000012281	zgc:123010	72	35.294	ENSFHEG00000005521	si:dkey-33c12.4	54	35.294	Fundulus_heteroclitus
ENSXCOG00000012281	zgc:123010	83	84.153	ENSFHEG00000002306	zgc:123010	69	84.153	Fundulus_heteroclitus
ENSXCOG00000012281	zgc:123010	83	73.297	ENSGMOG00000018473	zgc:123010	95	73.297	Gadus_morhua
ENSXCOG00000012281	zgc:123010	57	35.185	ENSGALG00000036747	TTC31	51	35.185	Gallus_gallus
ENSXCOG00000012281	zgc:123010	72	33.242	ENSGAFG00000017596	si:dkey-33c12.4	53	32.418	Gambusia_affinis
ENSXCOG00000012281	zgc:123010	83	87.705	ENSGAFG00000009373	zgc:123010	70	86.792	Gambusia_affinis
ENSXCOG00000012281	zgc:123010	72	34.824	ENSGACG00000004936	-	89	34.824	Gasterosteus_aculeatus
ENSXCOG00000012281	zgc:123010	83	76.022	ENSGACG00000007620	zgc:123010	95	76.022	Gasterosteus_aculeatus
ENSXCOG00000012281	zgc:123010	72	31.720	ENSHBUG00000010735	si:dkey-33c12.4	54	31.989	Haplochromis_burtoni
ENSXCOG00000012281	zgc:123010	83	53.298	ENSHBUG00000016720	-	71	53.298	Haplochromis_burtoni
ENSXCOG00000012281	zgc:123010	83	33.170	ENSIPUG00000005998	si:dkey-33c12.4	66	32.783	Ictalurus_punctatus
ENSXCOG00000012281	zgc:123010	71	33.803	ENSKMAG00000016610	si:dkey-33c12.4	53	33.521	Kryptolebias_marmoratus
ENSXCOG00000012281	zgc:123010	83	79.019	ENSKMAG00000021350	zgc:123010	70	78.226	Kryptolebias_marmoratus
ENSXCOG00000012281	zgc:123010	83	54.447	ENSLBEG00000013518	-	71	54.447	Labrus_bergylta
ENSXCOG00000012281	zgc:123010	83	77.596	ENSLBEG00000023984	zgc:123010	69	77.596	Labrus_bergylta
ENSXCOG00000012281	zgc:123010	72	31.653	ENSLBEG00000021088	-	54	31.653	Labrus_bergylta
ENSXCOG00000012281	zgc:123010	71	36.765	ENSLACG00000004602	-	76	34.023	Latimeria_chalumnae
ENSXCOG00000012281	zgc:123010	83	57.453	ENSLACG00000009001	zgc:123010	79	57.453	Latimeria_chalumnae
ENSXCOG00000012281	zgc:123010	96	32.558	ENSLOCG00000001861	-	71	32.558	Lepisosteus_oculatus
ENSXCOG00000012281	zgc:123010	83	62.973	ENSLOCG00000008967	zgc:123010	71	63.243	Lepisosteus_oculatus
ENSXCOG00000012281	zgc:123010	72	58.199	ENSMAMG00000003394	-	80	58.199	Mastacembelus_armatus
ENSXCOG00000012281	zgc:123010	72	58.387	ENSMAMG00000003439	-	81	58.387	Mastacembelus_armatus
ENSXCOG00000012281	zgc:123010	85	80.435	ENSMAMG00000001145	zgc:123010	87	80.435	Mastacembelus_armatus
ENSXCOG00000012281	zgc:123010	85	58.065	ENSMAMG00000002460	-	96	55.224	Mastacembelus_armatus
ENSXCOG00000012281	zgc:123010	72	34.085	ENSMAMG00000000111	si:dkey-33c12.4	53	34.085	Mastacembelus_armatus
ENSXCOG00000012281	zgc:123010	84	58.378	ENSMAMG00000002377	-	84	58.378	Mastacembelus_armatus
ENSXCOG00000012281	zgc:123010	58	33.226	ENSMAMG00000004311	-	51	33.226	Mastacembelus_armatus
ENSXCOG00000012281	zgc:123010	72	31.635	ENSMZEG00005014276	si:dkey-33c12.4	54	31.903	Maylandia_zebra
ENSXCOG00000012281	zgc:123010	83	79.235	ENSMZEG00005027733	zgc:123010	71	78.437	Maylandia_zebra
ENSXCOG00000012281	zgc:123010	83	53.298	ENSMZEG00005014740	-	90	53.298	Maylandia_zebra
ENSXCOG00000012281	zgc:123010	84	53.533	ENSMMOG00000017955	-	88	53.533	Mola_mola
ENSXCOG00000012281	zgc:123010	83	75.766	ENSMMOG00000010544	zgc:123010	88	66.197	Mola_mola
ENSXCOG00000012281	zgc:123010	72	32.394	ENSMALG00000002265	si:dkey-33c12.4	54	32.394	Monopterus_albus
ENSXCOG00000012281	zgc:123010	85	76.471	ENSMALG00000017698	zgc:123010	70	76.471	Monopterus_albus
ENSXCOG00000012281	zgc:123010	83	77.348	ENSNBRG00000021157	zgc:123010	80	77.348	Neolamprologus_brichardi
ENSXCOG00000012281	zgc:123010	51	44.595	ENSONIG00000007538	-	89	38.153	Oreochromis_niloticus
ENSXCOG00000012281	zgc:123010	83	75.683	ENSONIG00000018353	zgc:123010	74	74.933	Oreochromis_niloticus
ENSXCOG00000012281	zgc:123010	71	54.633	ENSONIG00000000297	-	100	54.633	Oreochromis_niloticus
ENSXCOG00000012281	zgc:123010	72	35.127	ENSONIG00000012263	-	99	34.402	Oreochromis_niloticus
ENSXCOG00000012281	zgc:123010	73	73.065	ENSORLG00000007675	zgc:123010	66	73.065	Oryzias_latipes
ENSXCOG00000012281	zgc:123010	72	30.878	ENSORLG00000029651	si:dkey-33c12.4	54	32.571	Oryzias_latipes
ENSXCOG00000012281	zgc:123010	73	73.065	ENSORLG00020003457	zgc:123010	66	73.065	Oryzias_latipes_hni
ENSXCOG00000012281	zgc:123010	72	30.878	ENSORLG00020008750	si:dkey-33c12.4	50	32.571	Oryzias_latipes_hni
ENSXCOG00000012281	zgc:123010	83	75.477	ENSORLG00015008373	zgc:123010	69	75.477	Oryzias_latipes_hsok
ENSXCOG00000012281	zgc:123010	72	30.086	ENSOMEG00000008913	-	51	31.519	Oryzias_melastigma
ENSXCOG00000012281	zgc:123010	83	76.839	ENSOMEG00000003408	zgc:123010	69	76.839	Oryzias_melastigma
ENSXCOG00000012281	zgc:123010	72	35.608	ENSPKIG00000011819	-	61	33.995	Paramormyrops_kingsleyae
ENSXCOG00000012281	zgc:123010	83	59.730	ENSPKIG00000015521	zgc:123010	79	59.730	Paramormyrops_kingsleyae
ENSXCOG00000012281	zgc:123010	83	65.934	ENSPMGG00000020251	zgc:123010	78	66.209	Periophthalmus_magnuspinnatus
ENSXCOG00000012281	zgc:123010	57	40.891	ENSPMAG00000009352	-	79	40.891	Petromyzon_marinus
ENSXCOG00000012281	zgc:123010	70	45.545	ENSPMAG00000004544	zgc:123010	100	45.545	Petromyzon_marinus
ENSXCOG00000012281	zgc:123010	58	32.302	ENSPFOG00000017092	-	74	30.168	Poecilia_formosa
ENSXCOG00000012281	zgc:123010	72	33.702	ENSPFOG00000009143	si:dkey-33c12.4	52	33.702	Poecilia_formosa
ENSXCOG00000012281	zgc:123010	83	87.432	ENSPFOG00000001073	zgc:123010	70	86.523	Poecilia_formosa
ENSXCOG00000012281	zgc:123010	72	33.702	ENSPLAG00000022537	si:dkey-33c12.4	54	33.702	Poecilia_latipinna
ENSXCOG00000012281	zgc:123010	83	87.432	ENSPLAG00000007711	zgc:123010	70	86.523	Poecilia_latipinna
ENSXCOG00000012281	zgc:123010	83	87.432	ENSPMEG00000005092	zgc:123010	70	86.523	Poecilia_mexicana
ENSXCOG00000012281	zgc:123010	72	33.702	ENSPMEG00000015590	si:dkey-33c12.4	52	33.702	Poecilia_mexicana
ENSXCOG00000012281	zgc:123010	100	80.631	ENSPREG00000019587	zgc:123010	100	80.631	Poecilia_reticulata
ENSXCOG00000012281	zgc:123010	58	30.392	ENSPREG00000016861	-	50	30.392	Poecilia_reticulata
ENSXCOG00000012281	zgc:123010	84	54.133	ENSPNYG00000023304	-	100	49.415	Pundamilia_nyererei
ENSXCOG00000012281	zgc:123010	72	31.635	ENSPNYG00000018262	si:dkey-33c12.4	54	31.903	Pundamilia_nyererei
ENSXCOG00000012281	zgc:123010	83	78.261	ENSPNYG00000007893	zgc:123010	71	78.167	Pundamilia_nyererei
ENSXCOG00000012281	zgc:123010	83	69.919	ENSPNAG00000007579	zgc:123010	69	69.919	Pygocentrus_nattereri
ENSXCOG00000012281	zgc:123010	82	31.127	ENSPNAG00000018386	si:dkey-33c12.4	65	30.607	Pygocentrus_nattereri
ENSXCOG00000012281	zgc:123010	83	60.428	ENSSFOG00015021394	zgc:123010	75	60.428	Scleropages_formosus
ENSXCOG00000012281	zgc:123010	69	35.758	ENSSFOG00015009199	-	52	35.758	Scleropages_formosus
ENSXCOG00000012281	zgc:123010	72	36.196	ENSSFOG00015005186	-	67	33.333	Scleropages_formosus
ENSXCOG00000012281	zgc:123010	83	53.100	ENSSMAG00000021096	-	71	53.100	Scophthalmus_maximus
ENSXCOG00000012281	zgc:123010	72	31.129	ENSSMAG00000008147	si:dkey-33c12.4	52	30.854	Scophthalmus_maximus
ENSXCOG00000012281	zgc:123010	83	77.929	ENSSMAG00000002904	zgc:123010	71	75.806	Scophthalmus_maximus
ENSXCOG00000012281	zgc:123010	83	79.837	ENSSDUG00000008651	zgc:123010	80	69.406	Seriola_dumerili
ENSXCOG00000012281	zgc:123010	83	58.090	ENSSDUG00000014026	-	74	57.326	Seriola_dumerili
ENSXCOG00000012281	zgc:123010	72	33.427	ENSSDUG00000003213	si:dkey-33c12.4	56	33.427	Seriola_dumerili
ENSXCOG00000012281	zgc:123010	93	72.927	ENSSLDG00000019386	zgc:123010	83	69.406	Seriola_lalandi_dorsalis
ENSXCOG00000012281	zgc:123010	72	32.958	ENSSLDG00000009448	si:dkey-33c12.4	52	33.521	Seriola_lalandi_dorsalis
ENSXCOG00000012281	zgc:123010	72	33.333	ENSSPAG00000022577	-	52	33.146	Stegastes_partitus
ENSXCOG00000012281	zgc:123010	91	74.623	ENSSPAG00000013621	zgc:123010	73	74.623	Stegastes_partitus
ENSXCOG00000012281	zgc:123010	83	70.879	ENSTRUG00000024824	zgc:123010	70	70.879	Takifugu_rubripes
ENSXCOG00000012281	zgc:123010	72	31.728	ENSTRUG00000022374	si:dkey-33c12.4	50	31.728	Takifugu_rubripes
ENSXCOG00000012281	zgc:123010	72	36.246	ENSTNIG00000010542	-	89	36.246	Tetraodon_nigroviridis
ENSXCOG00000012281	zgc:123010	57	35.714	ENSTNIG00000001154	-	96	35.714	Tetraodon_nigroviridis
ENSXCOG00000012281	zgc:123010	77	68.235	ENSTNIG00000001303	zgc:123010	100	68.235	Tetraodon_nigroviridis
ENSXCOG00000012281	zgc:123010	72	51.133	ENSXETG00000033896	-	99	51.133	Xenopus_tropicalis
ENSXCOG00000012281	zgc:123010	83	88.798	ENSXMAG00000002598	zgc:123010	70	87.871	Xiphophorus_maculatus
ENSXCOG00000012281	zgc:123010	72	33.058	ENSXMAG00000018535	si:dkey-33c12.4	53	32.231	Xiphophorus_maculatus