EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000012355 (Gene tree)
Gene ID
-
Gene Symbol
puf60b
Alias
fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name
poly-U binding splicing factor b
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Minus strand
Length
16675 bases
Position
chrKQ557214.1:15691142-15707816
Accession
ZDB-GENE-040625-116
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000016353RRM_1PF00076.227.2e-4412
ENSXCOP00000016353RRM_1PF00076.227.2e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000016559-1491-ENSXCOP00000016353496 (aa)--
Gene Model
Click here to download ENSXCOG00000012355's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012355's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000012355puf60b5436.275ENSXCOG00000019406u2af2a6538.235
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000012355puf60b10085.516ENSG00000179950PUF6010084.325Homo_sapiens
ENSXCOG00000012355puf60b10097.581ENSAPOG00000001713puf60b9797.581Acanthochromis_polyacanthus
ENSXCOG00000012355puf60b10080.806ENSAMEG00000006406PUF609279.463Ailuropoda_melanoleuca
ENSXCOG00000012355puf60b10076.258ENSACIG00000003263-9976.258Amphilophus_citrinellus
ENSXCOG00000012355puf60b10094.737ENSACIG00000021705puf60b10094.737Amphilophus_citrinellus
ENSXCOG00000012355puf60b10097.581ENSAOCG00000005395puf60b9797.581Amphiprion_ocellaris
ENSXCOG00000012355puf60b10081.676ENSAOCG00000015558-9781.518Amphiprion_ocellaris
ENSXCOG00000012355puf60b10077.154ENSAPEG00000001836-9978.088Amphiprion_percula
ENSXCOG00000012355puf60b10095.161ENSAPEG00000011923puf60b9795.161Amphiprion_percula
ENSXCOG00000012355puf60b10079.922ENSATEG00000006303-9880.350Anabas_testudineus
ENSXCOG00000012355puf60b10095.127ENSATEG00000001730puf60b9895.127Anabas_testudineus
ENSXCOG00000012355puf60b10083.301ENSAPLG00000010150PUF609982.150Anas_platyrhynchos
ENSXCOG00000012355puf60b10082.252ENSACAG00000001645PUF609681.298Anolis_carolinensis
ENSXCOG00000012355puf60b10085.317ENSANAG00000018626PUF6010081.382Aotus_nancymaae
ENSXCOG00000012355puf60b10097.984ENSACLG00000004462puf60b10097.984Astatotilapia_calliptera
ENSXCOG00000012355puf60b10080.196ENSAMXG00000041030puf60b10080.784Astyanax_mexicanus
ENSXCOG00000012355puf60b10087.425ENSAMXG00000036570puf60a9787.625Astyanax_mexicanus
ENSXCOG00000012355puf60b10085.913ENSBTAG00000037493PUF609881.958Bos_taurus
ENSXCOG00000012355puf60b8053.710WBGene00004389rnp-68354.704Caenorhabditis_elegans
ENSXCOG00000012355puf60b10085.516ENSCJAG00000021485PUF609781.574Callithrix_jacchus
ENSXCOG00000012355puf60b10085.714ENSCAFG00000001400PUF609284.524Canis_familiaris
ENSXCOG00000012355puf60b10085.714ENSCAFG00020018754PUF609781.766Canis_lupus_dingo
ENSXCOG00000012355puf60b10083.109ENSCHIG00000001618PUF608681.958Capra_hircus
ENSXCOG00000012355puf60b10084.047ENSTSYG00000011912PUF6010081.766Carlito_syrichta
ENSXCOG00000012355puf60b10080.709ENSCPOG00000014613PUF609379.331Cavia_porcellus
ENSXCOG00000012355puf60b10085.714ENSCCAG00000007744PUF609781.766Cebus_capucinus
ENSXCOG00000012355puf60b10085.516ENSCATG00000035405PUF609781.574Cercocebus_atys
ENSXCOG00000012355puf60b10085.714ENSCLAG00000009154PUF609184.524Chinchilla_lanigera
ENSXCOG00000012355puf60b10082.726ENSCSAG00000008878PUF6010081.574Chlorocebus_sabaeus
ENSXCOG00000012355puf60b10082.342ENSCPBG00000005595PUF609781.382Chrysemys_picta_bellii
ENSXCOG00000012355puf60b9848.544ENSCING00000008436-9548.330Ciona_intestinalis
ENSXCOG00000012355puf60b6261.994ENSCING00000002156-8762.500Ciona_intestinalis
ENSXCOG00000012355puf60b9749.482ENSCSAVG00000004765-9748.571Ciona_savignyi
ENSXCOG00000012355puf60b9753.817ENSCSAVG00000001385-9953.868Ciona_savignyi
ENSXCOG00000012355puf60b8084.938ENSCANG00000041843PUF6010080.095Colobus_angolensis_palliatus
ENSXCOG00000012355puf60b10085.913ENSCGRG00001017442Puf609184.722Cricetulus_griseus_chok1gshd
ENSXCOG00000012355puf60b10083.109ENSCGRG00000003717Puf609281.958Cricetulus_griseus_crigri
ENSXCOG00000012355puf60b10079.482ENSCSEG00000014845-8980.279Cynoglossus_semilaevis
ENSXCOG00000012355puf60b10094.737ENSCSEG00000019887puf60b9194.737Cynoglossus_semilaevis
ENSXCOG00000012355puf60b9082.960ENSCVAG00000001560-9382.287Cyprinodon_variegatus
ENSXCOG00000012355puf60b10098.992ENSCVAG00000009386puf60b10098.992Cyprinodon_variegatus
ENSXCOG00000012355puf60b10084.393ENSDARG00000032175puf60a9985.532Danio_rerio
ENSXCOG00000012355puf60b10081.373ENSDARG00000001241puf60b9994.779Danio_rerio
ENSXCOG00000012355puf60b9968.288ENSDNOG00000043278PUF609067.899Dasypus_novemcinctus
ENSXCOG00000012355puf60b10085.913ENSDORG00000004585Puf609384.722Dipodomys_ordii
ENSXCOG00000012355puf60b8466.667FBgn0028577hfp7267.843Drosophila_melanogaster
ENSXCOG00000012355puf60b10061.565ENSEBUG00000014291puf60b8462.413Eptatretus_burgeri
ENSXCOG00000012355puf60b9772.577ENSEBUG00000005470-8871.546Eptatretus_burgeri
ENSXCOG00000012355puf60b10085.714ENSEASG00005009695PUF609781.766Equus_asinus_asinus
ENSXCOG00000012355puf60b10085.714ENSECAG00000024681PUF609681.766Equus_caballus
ENSXCOG00000012355puf60b10084.733ENSELUG00000006507puf60b9885.199Esox_lucius
ENSXCOG00000012355puf60b10088.600ENSELUG00000018443-9988.600Esox_lucius
ENSXCOG00000012355puf60b10085.714ENSFCAG00000001045PUF6010081.766Felis_catus
ENSXCOG00000012355puf60b10074.088ENSFALG00000001136PUF609774.088Ficedula_albicollis
ENSXCOG00000012355puf60b10085.516ENSFDAG00000017177PUF609184.325Fukomys_damarensis
ENSXCOG00000012355puf60b9680.408ENSFHEG00000021687PUF6010080.705Fundulus_heteroclitus
ENSXCOG00000012355puf60b10099.798ENSFHEG00000020046puf60b10099.798Fundulus_heteroclitus
ENSXCOG00000012355puf60b10082.143ENSGMOG00000006392puf60b9981.746Gadus_morhua
ENSXCOG00000012355puf60b6584.548ENSGALG00000039901PUF609385.503Gallus_gallus
ENSXCOG00000012355puf60b10096.491ENSGAFG00000021040puf60b10096.491Gambusia_affinis
ENSXCOG00000012355puf60b10080.723ENSGAFG00000004334-9980.522Gambusia_affinis
ENSXCOG00000012355puf60b10071.120ENSGACG00000001484-10070.138Gasterosteus_aculeatus
ENSXCOG00000012355puf60b10081.092ENSGACG00000004717puf60b9781.092Gasterosteus_aculeatus
ENSXCOG00000012355puf60b10085.119ENSGAGG00000013289PUF609184.127Gopherus_agassizii
ENSXCOG00000012355puf60b10085.516ENSGGOG00000004646PUF609781.574Gorilla_gorilla
ENSXCOG00000012355puf60b10083.702ENSHBUG00000009634-10083.300Haplochromis_burtoni
ENSXCOG00000012355puf60b10097.984ENSHBUG00000015118puf60b10097.984Haplochromis_burtoni
ENSXCOG00000012355puf60b10085.516ENSHGLG00000006111PUF609184.325Heterocephalus_glaber_female
ENSXCOG00000012355puf60b10085.516ENSHGLG00100012362PUF609184.325Heterocephalus_glaber_male
ENSXCOG00000012355puf60b10092.233ENSHCOG00000015541puf60b9993.010Hippocampus_comes
ENSXCOG00000012355puf60b9865.422ENSHCOG00000000378-9964.394Hippocampus_comes
ENSXCOG00000012355puf60b10081.800ENSIPUG00000004660puf60b9981.409Ictalurus_punctatus
ENSXCOG00000012355puf60b10085.542ENSIPUG00000002453puf60a9985.141Ictalurus_punctatus
ENSXCOG00000012355puf60b10082.917ENSSTOG00000025037PUF609281.766Ictidomys_tridecemlineatus
ENSXCOG00000012355puf60b10085.913ENSJJAG00000001076Puf609284.722Jaculus_jaculus
ENSXCOG00000012355puf60b10075.577ENSKMAG00000010106-10076.008Kryptolebias_marmoratus
ENSXCOG00000012355puf60b10096.101ENSKMAG00000016745puf60b10096.101Kryptolebias_marmoratus
ENSXCOG00000012355puf60b10090.909ENSLBEG00000012505puf60b10090.909Labrus_bergylta
ENSXCOG00000012355puf60b7380.054ENSLACG00000005456PUF6010078.016Latimeria_chalumnae
ENSXCOG00000012355puf60b10085.825ENSLOCG00000010106puf60b9885.825Lepisosteus_oculatus
ENSXCOG00000012355puf60b10081.766ENSLAFG00000022929PUF609380.614Loxodonta_africana
ENSXCOG00000012355puf60b10085.516ENSMFAG00000043373PUF609881.574Macaca_fascicularis
ENSXCOG00000012355puf60b10085.516ENSMMUG00000013558PUF609781.574Macaca_mulatta
ENSXCOG00000012355puf60b10085.516ENSMNEG00000031099PUF609781.574Macaca_nemestrina
ENSXCOG00000012355puf60b10085.516ENSMLEG00000040009PUF6010084.325Mandrillus_leucophaeus
ENSXCOG00000012355puf60b10081.128ENSMAMG00000019476-9881.165Mastacembelus_armatus
ENSXCOG00000012355puf60b10093.529ENSMAMG00000010394puf60b9893.529Mastacembelus_armatus
ENSXCOG00000012355puf60b10097.984ENSMZEG00005018515puf60b10097.984Maylandia_zebra
ENSXCOG00000012355puf60b10080.934ENSMZEG00005019425-9880.545Maylandia_zebra
ENSXCOG00000012355puf60b10083.301ENSMGAG00000013070PUF609782.150Meleagris_gallopavo
ENSXCOG00000012355puf60b9671.047ENSMAUG00000018549-9570.287Mesocricetus_auratus
ENSXCOG00000012355puf60b6889.796ENSMAUG00000014267-8888.047Mesocricetus_auratus
ENSXCOG00000012355puf60b10082.917ENSMICG00000012226PUF609881.766Microcebus_murinus
ENSXCOG00000012355puf60b10085.913ENSMOCG00000018780Puf609184.722Microtus_ochrogaster
ENSXCOG00000012355puf60b10076.305ENSMMOG00000018059-9976.376Mola_mola
ENSXCOG00000012355puf60b10094.932ENSMMOG00000004217puf60b10094.932Mola_mola
ENSXCOG00000012355puf60b10085.714ENSMODG00000009161PUF609384.524Monodelphis_domestica
ENSXCOG00000012355puf60b10086.745ENSMALG00000006797puf60b9786.745Monopterus_albus
ENSXCOG00000012355puf60b10079.727ENSMALG00000000200-9879.572Monopterus_albus
ENSXCOG00000012355puf60b10086.111MGP_CAROLIEiJ_G0019910Puf609184.921Mus_caroli
ENSXCOG00000012355puf60b10086.111ENSMUSG00000002524Puf609184.921Mus_musculus
ENSXCOG00000012355puf60b10086.111MGP_PahariEiJ_G0019920Puf609184.921Mus_pahari
ENSXCOG00000012355puf60b10086.111MGP_SPRETEiJ_G0020812Puf609184.921Mus_spretus
ENSXCOG00000012355puf60b10082.726ENSMPUG00000008137PUF609181.574Mustela_putorius_furo
ENSXCOG00000012355puf60b10082.342ENSMLUG00000000238-9281.190Myotis_lucifugus
ENSXCOG00000012355puf60b10082.143ENSMLUG00000013032-9780.952Myotis_lucifugus
ENSXCOG00000012355puf60b10085.913ENSNGAG00000000712Puf6010081.958Nannospalax_galili
ENSXCOG00000012355puf60b8193.285ENSNBRG00000013047puf60b9793.285Neolamprologus_brichardi
ENSXCOG00000012355puf60b10080.934ENSNBRG00000017223-9880.545Neolamprologus_brichardi
ENSXCOG00000012355puf60b10085.516ENSNLEG00000002156PUF609784.325Nomascus_leucogenys
ENSXCOG00000012355puf60b7187.726ENSOPRG00000002147PUF607287.726Ochotona_princeps
ENSXCOG00000012355puf60b7089.783ENSODEG00000014024-8889.783Octodon_degus
ENSXCOG00000012355puf60b9860.317ENSODEG00000015513-9759.381Octodon_degus
ENSXCOG00000012355puf60b10080.739ENSONIG00000014030-9780.350Oreochromis_niloticus
ENSXCOG00000012355puf60b10094.737ENSONIG00000006247puf60b9794.737Oreochromis_niloticus
ENSXCOG00000012355puf60b9768.800ENSOANG00000006962PUF609767.335Ornithorhynchus_anatinus
ENSXCOG00000012355puf60b9980.120ENSORLG00000028655-9979.920Oryzias_latipes
ENSXCOG00000012355puf60b10098.387ENSORLG00000012279puf60b9798.387Oryzias_latipes
ENSXCOG00000012355puf60b9980.194ENSORLG00020018144-9780.000Oryzias_latipes_hni
ENSXCOG00000012355puf60b10095.127ENSORLG00020007333puf6010095.127Oryzias_latipes_hni
ENSXCOG00000012355puf60b10094.757ENSORLG00015007718puf60b10094.757Oryzias_latipes_hsok
ENSXCOG00000012355puf60b9980.194ENSORLG00015016833-9780.000Oryzias_latipes_hsok
ENSXCOG00000012355puf60b9982.897ENSOMEG00000022185-9582.696Oryzias_melastigma
ENSXCOG00000012355puf60b10095.161ENSOMEG00000001643puf60b10095.161Oryzias_melastigma
ENSXCOG00000012355puf60b10082.917ENSOGAG00000006259PUF609281.766Otolemur_garnettii
ENSXCOG00000012355puf60b10082.296ENSOARG00000016235PUF609781.128Ovis_aries
ENSXCOG00000012355puf60b10085.516ENSPPAG00000029933PUF609781.574Pan_paniscus
ENSXCOG00000012355puf60b10085.714ENSPPRG00000003257PUF6010084.524Panthera_pardus
ENSXCOG00000012355puf60b10085.516ENSPTIG00000009795PUF609882.398Panthera_tigris_altaica
ENSXCOG00000012355puf60b10085.516ENSPTRG00000043963-9781.574Pan_troglodytes
ENSXCOG00000012355puf60b10085.516ENSPTRG00000020670PUF609781.574Pan_troglodytes
ENSXCOG00000012355puf60b10085.516ENSPANG00000021936PUF609781.574Papio_anubis
ENSXCOG00000012355puf60b10089.919ENSPKIG00000012204puf60b9890.726Paramormyrops_kingsleyae
ENSXCOG00000012355puf60b10089.400ENSPKIG00000004295puf60a9987.761Paramormyrops_kingsleyae
ENSXCOG00000012355puf60b10082.726ENSPSIG00000004679PUF609881.574Pelodiscus_sinensis
ENSXCOG00000012355puf60b10093.788ENSPMGG00000013444puf60b9993.788Periophthalmus_magnuspinnatus
ENSXCOG00000012355puf60b10085.913ENSPEMG00000008820Puf609184.722Peromyscus_maniculatus_bairdii
ENSXCOG00000012355puf60b10085.714ENSPCIG00000020270PUF609881.766Phascolarctos_cinereus
ENSXCOG00000012355puf60b10079.572ENSPFOG00000011118-9779.612Poecilia_formosa
ENSXCOG00000012355puf60b100100.000ENSPFOG00000019217puf60b98100.000Poecilia_formosa
ENSXCOG00000012355puf60b100100.000ENSPLAG00000010754puf60b100100.000Poecilia_latipinna
ENSXCOG00000012355puf60b10079.806ENSPLAG00000017025-9079.612Poecilia_latipinna
ENSXCOG00000012355puf60b100100.000ENSPMEG00000000838puf60b100100.000Poecilia_mexicana
ENSXCOG00000012355puf60b10079.767ENSPMEG00000009767-9079.806Poecilia_mexicana
ENSXCOG00000012355puf60b10097.984ENSPREG00000005440puf60b10097.984Poecilia_reticulata
ENSXCOG00000012355puf60b8079.858ENSPPYG00000018951-9578.436Pongo_abelii
ENSXCOG00000012355puf60b8081.517ENSPCAG00000014837PUF6010080.095Procavia_capensis
ENSXCOG00000012355puf60b10085.516ENSPCOG00000027981PUF609881.574Propithecus_coquereli
ENSXCOG00000012355puf60b10085.443ENSPVAG00000016167PUF608185.443Pteropus_vampyrus
ENSXCOG00000012355puf60b10080.934ENSPNYG00000004273-9880.545Pundamilia_nyererei
ENSXCOG00000012355puf60b10094.737ENSPNYG00000002556puf60b10094.737Pundamilia_nyererei
ENSXCOG00000012355puf60b10087.425ENSPNAG00000019909puf60a9987.625Pygocentrus_nattereri
ENSXCOG00000012355puf60b10082.863ENSPNAG00000019415puf60b8982.460Pygocentrus_nattereri
ENSXCOG00000012355puf60b10086.111ENSRNOG00000009960Puf609184.921Rattus_norvegicus
ENSXCOG00000012355puf60b10085.516ENSRBIG00000035274PUF609781.574Rhinopithecus_bieti
ENSXCOG00000012355puf60b10085.516ENSRROG00000029360PUF609881.574Rhinopithecus_roxellana
ENSXCOG00000012355puf60b10084.127ENSSBOG00000027089PUF609682.937Saimiri_boliviensis_boliviensis
ENSXCOG00000012355puf60b9082.090ENSSHAG00000006668PUF608980.810Sarcophilus_harrisii
ENSXCOG00000012355puf60b10082.470ENSSFOG00015019619puf60b10082.609Scleropages_formosus
ENSXCOG00000012355puf60b9586.965ENSSFOG00015019371puf60a9886.965Scleropages_formosus
ENSXCOG00000012355puf60b7697.980ENSSMAG00000016381puf60b7597.980Scophthalmus_maximus
ENSXCOG00000012355puf60b9979.804ENSSDUG00000007048-9581.964Seriola_dumerili
ENSXCOG00000012355puf60b10094.355ENSSDUG00000009935puf60b10094.355Seriola_dumerili
ENSXCOG00000012355puf60b10095.686ENSSLDG00000024011puf60b9895.686Seriola_lalandi_dorsalis
ENSXCOG00000012355puf60b10081.395ENSSLDG00000007366-9981.625Seriola_lalandi_dorsalis
ENSXCOG00000012355puf60b6478.788ENSSPUG00000013518PUF609278.788Sphenodon_punctatus
ENSXCOG00000012355puf60b10081.359ENSSPAG00000020285-10081.202Stegastes_partitus
ENSXCOG00000012355puf60b10095.294ENSSPAG00000012144puf60b9895.294Stegastes_partitus
ENSXCOG00000012355puf60b10085.714ENSSSCG00000038800PUF609784.524Sus_scrofa
ENSXCOG00000012355puf60b10080.460ENSTGUG00000012797-9979.808Taeniopygia_guttata
ENSXCOG00000012355puf60b10081.690ENSTRUG00000008843-10081.087Takifugu_rubripes
ENSXCOG00000012355puf60b10094.152ENSTRUG00000005420puf60b9894.706Takifugu_rubripes
ENSXCOG00000012355puf60b10093.957ENSTNIG00000013675puf60b9993.957Tetraodon_nigroviridis
ENSXCOG00000012355puf60b10077.193ENSTNIG00000003069-9977.388Tetraodon_nigroviridis
ENSXCOG00000012355puf60b7666.382ENSTBEG00000001899-10067.236Tupaia_belangeri
ENSXCOG00000012355puf60b5786.254ENSTBEG00000002751-9785.911Tupaia_belangeri
ENSXCOG00000012355puf60b10081.574ENSTTRG00000017088PUF6010080.806Tursiops_truncatus
ENSXCOG00000012355puf60b10085.714ENSUAMG00000024917PUF609781.766Ursus_americanus
ENSXCOG00000012355puf60b10077.927ENSUMAG00000000272PUF609276.583Ursus_maritimus
ENSXCOG00000012355puf60b10085.714ENSVVUG00000022527PUF6010081.766Vulpes_vulpes
ENSXCOG00000012355puf60b10083.532ENSXETG00000012469puf609882.540Xenopus_tropicalis
ENSXCOG00000012355puf60b10081.727ENSXMAG00000010507-9881.526Xiphophorus_maculatus
ENSXCOG00000012355puf60b100100.000ENSXMAG00000001862puf60b10096.686Xiphophorus_maculatus

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