EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000012364 (Gene tree)
Gene ID: -
Gene Symbol: ddx28
Alias: zgc:153386
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 2243 bases
Position: chrKQ557219.1:23413727-23415969
Accession: ZDB-GENE-061013-64
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000016366	ResIII	PF04851.15	7.4e-05	1	1
ENSXCOP00000016366	DEAD	PF00270.29	2.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000016572	-	1695	-	ENSXCOP00000016366	564 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012364's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000012364	ddx28	62	32.857	ENSXCOG00000007082	ddx1	53	32.857
ENSXCOG00000012364	ddx28	65	30.239	ENSXCOG00000010120	ddx55	61	30.239

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012364	ddx28	90	48.549	ENSG00000182810	DDX28	94	48.549	Homo_sapiens
ENSXCOG00000012364	ddx28	98	75.986	ENSAPOG00000000991	ddx28	97	75.986	Acanthochromis_polyacanthus
ENSXCOG00000012364	ddx28	90	48.450	ENSAMEG00000019426	DDX28	94	48.438	Ailuropoda_melanoleuca
ENSXCOG00000012364	ddx28	97	74.684	ENSACIG00000021615	ddx28	98	74.684	Amphilophus_citrinellus
ENSXCOG00000012364	ddx28	98	75.986	ENSAOCG00000004610	ddx28	97	75.986	Amphiprion_ocellaris
ENSXCOG00000012364	ddx28	98	75.627	ENSAPEG00000002143	ddx28	97	75.627	Amphiprion_percula
ENSXCOG00000012364	ddx28	98	73.179	ENSATEG00000018691	ddx28	99	73.179	Anabas_testudineus
ENSXCOG00000012364	ddx28	89	47.945	ENSACAG00000009755	DDX28	93	47.750	Anolis_carolinensis
ENSXCOG00000012364	ddx28	96	72.661	ENSACLG00000012984	ddx28	96	72.661	Astatotilapia_calliptera
ENSXCOG00000012364	ddx28	95	60.830	ENSAMXG00000005878	ddx28	96	60.830	Astyanax_mexicanus
ENSXCOG00000012364	ddx28	90	49.228	ENSBTAG00000004290	DDX28	93	49.228	Bos_taurus
ENSXCOG00000012364	ddx28	88	48.527	ENSCAFG00000020327	DDX28	94	48.527	Canis_familiaris
ENSXCOG00000012364	ddx28	88	48.527	ENSCAFG00020019785	DDX28	94	48.527	Canis_lupus_dingo
ENSXCOG00000012364	ddx28	90	50.000	ENSCHIG00000009658	DDX28	93	50.000	Capra_hircus
ENSXCOG00000012364	ddx28	89	49.416	ENSCPOG00000013746	DDX28	94	49.416	Cavia_porcellus
ENSXCOG00000012364	ddx28	90	48.356	ENSCSAG00000018472	DDX28	92	48.356	Chlorocebus_sabaeus
ENSXCOG00000012364	ddx28	81	51.304	ENSCPBG00000012105	DDX28	81	53.350	Chrysemys_picta_bellii
ENSXCOG00000012364	ddx28	66	35.714	ENSCSAVG00000006341	-	97	35.714	Ciona_savignyi
ENSXCOG00000012364	ddx28	87	49.206	ENSCGRG00001024412	Ddx28	94	49.505	Cricetulus_griseus_chok1gshd
ENSXCOG00000012364	ddx28	90	71.850	ENSCSEG00000011651	ddx28	90	71.850	Cynoglossus_semilaevis
ENSXCOG00000012364	ddx28	97	82.696	ENSCVAG00000004044	ddx28	98	82.696	Cyprinodon_variegatus
ENSXCOG00000012364	ddx28	98	60.791	ENSDARG00000060411	ddx28	97	60.791	Danio_rerio
ENSXCOG00000012364	ddx28	63	55.068	ENSDNOG00000033593	DDX28	98	55.342	Dasypus_novemcinctus
ENSXCOG00000012364	ddx28	90	47.868	ENSDORG00000028868	Ddx28	94	48.356	Dipodomys_ordii
ENSXCOG00000012364	ddx28	80	37.609	FBgn0086130	Dbp21E2	87	36.585	Drosophila_melanogaster
ENSXCOG00000012364	ddx28	90	48.846	ENSETEG00000001062	-	95	48.846	Echinops_telfairi
ENSXCOG00000012364	ddx28	72	43.085	ENSEBUG00000004791	ddx28	84	40.179	Eptatretus_burgeri
ENSXCOG00000012364	ddx28	90	49.038	ENSEASG00005020387	DDX28	94	48.940	Equus_asinus_asinus
ENSXCOG00000012364	ddx28	90	49.231	ENSECAG00000006451	DDX28	94	49.133	Equus_caballus
ENSXCOG00000012364	ddx28	71	43.447	ENSEEUG00000005017	DDX28	94	43.447	Erinaceus_europaeus
ENSXCOG00000012364	ddx28	93	65.981	ENSELUG00000005302	ddx28	98	66.860	Esox_lucius
ENSXCOG00000012364	ddx28	90	49.710	ENSFCAG00000012858	DDX28	94	49.710	Felis_catus
ENSXCOG00000012364	ddx28	98	79.928	ENSFHEG00000012573	ddx28	99	79.928	Fundulus_heteroclitus
ENSXCOG00000012364	ddx28	91	68.199	ENSGMOG00000017045	ddx28	98	68.199	Gadus_morhua
ENSXCOG00000012364	ddx28	90	44.129	ENSGALG00000048700	DDX28	95	42.629	Gallus_gallus
ENSXCOG00000012364	ddx28	97	94.312	ENSGAFG00000009249	ddx28	97	94.312	Gambusia_affinis
ENSXCOG00000012364	ddx28	90	76.863	ENSGACG00000016367	ddx28	95	76.863	Gasterosteus_aculeatus
ENSXCOG00000012364	ddx28	78	48.214	ENSGAGG00000004565	DDX28	97	48.214	Gopherus_agassizii
ENSXCOG00000012364	ddx28	89	48.733	ENSGGOG00000001220	DDX28	94	48.733	Gorilla_gorilla
ENSXCOG00000012364	ddx28	97	75.818	ENSHBUG00000001016	ddx28	97	75.818	Haplochromis_burtoni
ENSXCOG00000012364	ddx28	97	69.565	ENSHCOG00000017590	ddx28	98	69.565	Hippocampus_comes
ENSXCOG00000012364	ddx28	94	61.194	ENSIPUG00000017350	Ddx28	94	61.194	Ictalurus_punctatus
ENSXCOG00000012364	ddx28	89	48.932	ENSSTOG00000002064	DDX28	94	48.932	Ictidomys_tridecemlineatus
ENSXCOG00000012364	ddx28	90	48.084	ENSJJAG00000012460	-	94	48.084	Jaculus_jaculus
ENSXCOG00000012364	ddx28	97	76.812	ENSKMAG00000018183	ddx28	98	76.812	Kryptolebias_marmoratus
ENSXCOG00000012364	ddx28	96	73.818	ENSLBEG00000006072	ddx28	97	73.818	Labrus_bergylta
ENSXCOG00000012364	ddx28	90	57.059	ENSLACG00000005578	DDX28	88	57.059	Latimeria_chalumnae
ENSXCOG00000012364	ddx28	89	60.000	ENSLOCG00000017604	ddx28	91	60.000	Lepisosteus_oculatus
ENSXCOG00000012364	ddx28	90	49.130	ENSLAFG00000031239	DDX28	93	49.130	Loxodonta_africana
ENSXCOG00000012364	ddx28	90	48.356	ENSMMUG00000010836	DDX28	92	48.356	Macaca_mulatta
ENSXCOG00000012364	ddx28	92	75.143	ENSMAMG00000020220	ddx28	93	75.143	Mastacembelus_armatus
ENSXCOG00000012364	ddx28	97	75.818	ENSMZEG00005009292	ddx28	97	75.818	Maylandia_zebra
ENSXCOG00000012364	ddx28	90	40.000	ENSMICG00000012346	-	92	39.105	Microcebus_murinus
ENSXCOG00000012364	ddx28	90	49.612	ENSMOCG00000009815	Ddx28	94	49.612	Microtus_ochrogaster
ENSXCOG00000012364	ddx28	98	70.968	ENSMMOG00000000270	ddx28	99	70.968	Mola_mola
ENSXCOG00000012364	ddx28	91	49.421	ENSMODG00000005303	DDX28	94	49.421	Monodelphis_domestica
ENSXCOG00000012364	ddx28	96	73.309	ENSMALG00000008864	ddx28	96	73.309	Monopterus_albus
ENSXCOG00000012364	ddx28	88	49.213	MGP_CAROLIEiJ_G0031510	Ddx28	93	49.213	Mus_caroli
ENSXCOG00000012364	ddx28	88	49.412	ENSMUSG00000045538	Ddx28	93	49.412	Mus_musculus
ENSXCOG00000012364	ddx28	88	49.216	MGP_PahariEiJ_G0023110	Ddx28	93	49.216	Mus_pahari
ENSXCOG00000012364	ddx28	88	49.412	MGP_SPRETEiJ_G0032628	Ddx28	93	49.412	Mus_spretus
ENSXCOG00000012364	ddx28	64	52.561	ENSMPUG00000006915	DDX28	92	52.561	Mustela_putorius_furo
ENSXCOG00000012364	ddx28	93	48.141	ENSMLUG00000005899	DDX28	98	48.141	Myotis_lucifugus
ENSXCOG00000012364	ddx28	90	49.326	ENSNGAG00000015762	Ddx28	93	49.518	Nannospalax_galili
ENSXCOG00000012364	ddx28	96	76.514	ENSNBRG00000001337	ddx28	98	76.514	Neolamprologus_brichardi
ENSXCOG00000012364	ddx28	96	76.147	ENSONIG00000020597	ddx28	97	76.147	Oreochromis_niloticus
ENSXCOG00000012364	ddx28	51	51.712	ENSOANG00000003551	-	99	51.712	Ornithorhynchus_anatinus
ENSXCOG00000012364	ddx28	90	49.807	ENSOCUG00000023074	DDX28	94	50.000	Oryctolagus_cuniculus
ENSXCOG00000012364	ddx28	98	73.874	ENSORLG00000011968	ddx28	99	73.874	Oryzias_latipes
ENSXCOG00000012364	ddx28	93	76.281	ENSORLG00020001951	ddx28	96	76.281	Oryzias_latipes_hni
ENSXCOG00000012364	ddx28	93	76.660	ENSORLG00015023030	ddx28	96	76.660	Oryzias_latipes_hsok
ENSXCOG00000012364	ddx28	98	73.703	ENSOMEG00000012445	ddx28	99	73.703	Oryzias_melastigma
ENSXCOG00000012364	ddx28	89	49.419	ENSOGAG00000016895	DDX28	94	49.419	Otolemur_garnettii
ENSXCOG00000012364	ddx28	78	48.552	ENSOARG00000003313	DDX28	99	48.552	Ovis_aries
ENSXCOG00000012364	ddx28	89	46.199	ENSPPAG00000036971	DDX28	93	46.199	Pan_paniscus
ENSXCOG00000012364	ddx28	90	49.710	ENSPPRG00000018322	DDX28	94	49.710	Panthera_pardus
ENSXCOG00000012364	ddx28	90	47.969	ENSPTIG00000006444	DDX28	93	47.969	Panthera_tigris_altaica
ENSXCOG00000012364	ddx28	90	48.549	ENSPTRG00000008258	DDX28	94	48.549	Pan_troglodytes
ENSXCOG00000012364	ddx28	90	63.158	ENSPKIG00000021200	ddx28	94	63.158	Paramormyrops_kingsleyae
ENSXCOG00000012364	ddx28	50	58.803	ENSPSIG00000001127	DDX28	94	58.803	Pelodiscus_sinensis
ENSXCOG00000012364	ddx28	93	66.981	ENSPMGG00000007908	ddx28	93	66.981	Periophthalmus_magnuspinnatus
ENSXCOG00000012364	ddx28	90	48.654	ENSPEMG00000003395	Ddx28	94	48.654	Peromyscus_maniculatus_bairdii
ENSXCOG00000012364	ddx28	98	94.575	ENSPFOG00000020838	DDX28	99	94.575	Poecilia_formosa
ENSXCOG00000012364	ddx28	99	94.474	ENSPFOG00000020952	ddx28	99	94.474	Poecilia_formosa
ENSXCOG00000012364	ddx28	99	93.939	ENSPLAG00000016292	ddx28	99	93.939	Poecilia_latipinna
ENSXCOG00000012364	ddx28	98	94.394	ENSPMEG00000011311	ddx28	97	94.394	Poecilia_mexicana
ENSXCOG00000012364	ddx28	99	94.118	ENSPREG00000002899	ddx28	99	94.118	Poecilia_reticulata
ENSXCOG00000012364	ddx28	90	48.162	ENSPPYG00000007481	DDX28	94	48.162	Pongo_abelii
ENSXCOG00000012364	ddx28	90	49.031	ENSPCOG00000024632	DDX28	94	49.031	Propithecus_coquereli
ENSXCOG00000012364	ddx28	97	76.000	ENSPNYG00000018804	ddx28	97	76.000	Pundamilia_nyererei
ENSXCOG00000012364	ddx28	90	61.165	ENSPNAG00000014597	ddx28	95	61.165	Pygocentrus_nattereri
ENSXCOG00000012364	ddx28	88	48.928	ENSRNOG00000019817	Ddx28	93	48.928	Rattus_norvegicus
ENSXCOG00000012364	ddx28	90	62.016	ENSSFOG00015010181	ddx28	93	62.016	Scleropages_formosus
ENSXCOG00000012364	ddx28	90	74.902	ENSSMAG00000006831	ddx28	95	74.902	Scophthalmus_maximus
ENSXCOG00000012364	ddx28	96	75.636	ENSSDUG00000003257	ddx28	96	75.636	Seriola_dumerili
ENSXCOG00000012364	ddx28	96	74.909	ENSSLDG00000004513	ddx28	96	74.909	Seriola_lalandi_dorsalis
ENSXCOG00000012364	ddx28	94	47.212	ENSSARG00000014169	DDX28	99	47.212	Sorex_araneus
ENSXCOG00000012364	ddx28	97	76.673	ENSSPAG00000000988	ddx28	98	76.673	Stegastes_partitus
ENSXCOG00000012364	ddx28	90	48.842	ENSSSCG00000026038	DDX28	94	49.035	Sus_scrofa
ENSXCOG00000012364	ddx28	97	69.565	ENSTRUG00000007815	ddx28	99	69.565	Takifugu_rubripes
ENSXCOG00000012364	ddx28	88	72.366	ENSTNIG00000011352	ddx28	99	72.366	Tetraodon_nigroviridis
ENSXCOG00000012364	ddx28	72	61.972	ENSTBEG00000017695	DDX28	76	61.972	Tupaia_belangeri
ENSXCOG00000012364	ddx28	90	48.549	ENSUAMG00000016116	DDX28	93	48.538	Ursus_americanus
ENSXCOG00000012364	ddx28	76	50.797	ENSUMAG00000019200	DDX28	88	50.797	Ursus_maritimus
ENSXCOG00000012364	ddx28	72	43.675	ENSVVUG00000012876	DDX28	81	43.675	Vulpes_vulpes
ENSXCOG00000012364	ddx28	88	47.284	ENSXETG00000005435	ddx28	97	47.284	Xenopus_tropicalis
ENSXCOG00000012364	ddx28	94	95.265	ENSXMAG00000019603	ddx28	96	95.265	Xiphophorus_maculatus