EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000012418 (Gene tree)
Gene ID: -
Gene Symbol: eif4e1c
Alias: eif4E-1C|fb57e09|wu:fb57e09|zgc:110154
Full Name: eukaryotic translation initiation factor 4E family member 1c
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 6372 bases
Position: chrKQ557215.1:14534113-14540484
Accession: ZDB-GENE-050417-398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000016634	IF4E	PF01652.18	6.8e-57	1	1
ENSXCOP00000016636	IF4E	PF01652.18	4.4e-55	1	1
ENSXCOP00000016709	IF4E	PF01652.18	6.1e-55	1	1
ENSXCOP00000016707	IF4E	PF01652.18	4.7e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000016922	-	519	-	ENSXCOP00000016707	172 (aa)	-	-
ENSXCOT00000016849	-	633	-	ENSXCOP00000016634	210 (aa)	-	UPI000293CBBD
ENSXCOT00000016924	-	693	-	ENSXCOP00000016709	230 (aa)	-	-
ENSXCOT00000016851	-	618	-	ENSXCOP00000016636	205 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012418's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000012418	eif4e1c	91	38.150	ENSXCOG00000008291	eif4e2rs1	92	35.122
ENSXCOG00000012418	eif4e1c	99	69.613	ENSXCOG00000014847	eif4ea	94	69.082
ENSXCOG00000012418	eif4e1c	100	68.306	ENSXCOG00000013737	eif4eb	99	72.021

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012418	eif4e1c	100	97.143	ENSAPOG00000019534	eif4e1c	100	97.143	Acanthochromis_polyacanthus
ENSXCOG00000012418	eif4e1c	97	87.640	ENSACIG00000021242	eif4e1c	99	97.191	Amphilophus_citrinellus
ENSXCOG00000012418	eif4e1c	100	97.619	ENSAOCG00000004344	eif4e1c	100	97.619	Amphiprion_ocellaris
ENSXCOG00000012418	eif4e1c	100	97.619	ENSAPEG00000013289	eif4e1c	100	97.619	Amphiprion_percula
ENSXCOG00000012418	eif4e1c	100	96.190	ENSATEG00000001670	eif4e1c	100	96.190	Anabas_testudineus
ENSXCOG00000012418	eif4e1c	100	97.143	ENSACLG00000011119	eif4e1c	100	97.143	Astatotilapia_calliptera
ENSXCOG00000012418	eif4e1c	100	88.571	ENSAMXG00000029997	eif4e1c	100	88.571	Astyanax_mexicanus
ENSXCOG00000012418	eif4e1c	97	51.977	WBGene00002061	ife-3	84	50.472	Caenorhabditis_elegans
ENSXCOG00000012418	eif4e1c	97	95.588	ENSCSEG00000006680	eif4e1c	94	95.588	Cynoglossus_semilaevis
ENSXCOG00000012418	eif4e1c	100	97.619	ENSCVAG00000013853	eif4e1c	100	97.619	Cyprinodon_variegatus
ENSXCOG00000012418	eif4e1c	100	87.793	ENSDARG00000012274	eif4e1c	100	90.598	Danio_rerio
ENSXCOG00000012418	eif4e1c	100	84.091	ENSELUG00000022791	eif4e1c	100	84.091	Esox_lucius
ENSXCOG00000012418	eif4e1c	100	96.667	ENSFHEG00000002097	eif4e1c	100	96.667	Fundulus_heteroclitus
ENSXCOG00000012418	eif4e1c	100	85.246	ENSGMOG00000006731	eif4e1c	100	86.275	Gadus_morhua
ENSXCOG00000012418	eif4e1c	100	99.524	ENSGAFG00000009446	eif4e1c	100	99.524	Gambusia_affinis
ENSXCOG00000012418	eif4e1c	100	94.313	ENSGACG00000007799	eif4e1c	100	95.726	Gasterosteus_aculeatus
ENSXCOG00000012418	eif4e1c	100	97.143	ENSHBUG00000022939	eif4e1c	100	97.143	Haplochromis_burtoni
ENSXCOG00000012418	eif4e1c	100	88.571	ENSHCOG00000004116	eif4e1c	100	88.571	Hippocampus_comes
ENSXCOG00000012418	eif4e1c	100	88.208	ENSIPUG00000005027	if4e	100	88.208	Ictalurus_punctatus
ENSXCOG00000012418	eif4e1c	100	92.857	ENSKMAG00000004557	eif4e1c	100	92.857	Kryptolebias_marmoratus
ENSXCOG00000012418	eif4e1c	100	95.735	ENSLBEG00000007011	eif4e1c	100	95.735	Labrus_bergylta
ENSXCOG00000012418	eif4e1c	100	68.280	ENSLACG00000015230	eif4e1c	88	71.503	Latimeria_chalumnae
ENSXCOG00000012418	eif4e1c	100	86.730	ENSLOCG00000009334	eif4e1c	98	86.730	Lepisosteus_oculatus
ENSXCOG00000012418	eif4e1c	100	96.667	ENSMAMG00000000450	eif4e1c	100	96.667	Mastacembelus_armatus
ENSXCOG00000012418	eif4e1c	100	97.143	ENSMZEG00005027687	eif4e1c	100	97.143	Maylandia_zebra
ENSXCOG00000012418	eif4e1c	100	91.429	ENSMMOG00000010487	eif4e1c	100	91.429	Mola_mola
ENSXCOG00000012418	eif4e1c	100	92.381	ENSMALG00000018219	eif4e1c	100	92.381	Monopterus_albus
ENSXCOG00000012418	eif4e1c	100	94.762	ENSNBRG00000020784	eif4e1c	98	94.762	Neolamprologus_brichardi
ENSXCOG00000012418	eif4e1c	100	97.143	ENSONIG00000018400	eif4e1c	100	97.143	Oreochromis_niloticus
ENSXCOG00000012418	eif4e1c	100	90.995	ENSORLG00000019400	eif4e1c	100	90.995	Oryzias_latipes
ENSXCOG00000012418	eif4e1c	100	91.469	ENSORLG00020003856	eif4e1c	100	91.469	Oryzias_latipes_hni
ENSXCOG00000012418	eif4e1c	100	91.943	ENSORLG00015009011	eif4e1c	100	91.943	Oryzias_latipes_hsok
ENSXCOG00000012418	eif4e1c	100	95.714	ENSOMEG00000003911	eif4e1c	100	95.714	Oryzias_melastigma
ENSXCOG00000012418	eif4e1c	100	84.390	ENSPKIG00000009484	eif4e1c	99	85.922	Paramormyrops_kingsleyae
ENSXCOG00000012418	eif4e1c	99	92.788	ENSPMGG00000010390	eif4e1c	92	92.788	Periophthalmus_magnuspinnatus
ENSXCOG00000012418	eif4e1c	100	99.048	ENSPFOG00000002854	eif4e1c	100	99.048	Poecilia_formosa
ENSXCOG00000012418	eif4e1c	100	99.048	ENSPLAG00000009606	eif4e1c	100	99.048	Poecilia_latipinna
ENSXCOG00000012418	eif4e1c	100	99.048	ENSPMEG00000003072	eif4e1c	100	99.048	Poecilia_mexicana
ENSXCOG00000012418	eif4e1c	100	99.048	ENSPREG00000018571	eif4e1c	100	99.048	Poecilia_reticulata
ENSXCOG00000012418	eif4e1c	100	96.667	ENSPNYG00000007444	eif4e1c	100	96.667	Pundamilia_nyererei
ENSXCOG00000012418	eif4e1c	100	88.679	ENSPNAG00000027050	eif4e1c	100	88.679	Pygocentrus_nattereri
ENSXCOG00000012418	eif4e1c	100	86.321	ENSSFOG00015002672	eif4e1c	100	86.321	Scleropages_formosus
ENSXCOG00000012418	eif4e1c	100	94.762	ENSSMAG00000002255	eif4e1c	100	94.762	Scophthalmus_maximus
ENSXCOG00000012418	eif4e1c	100	96.667	ENSSDUG00000009117	eif4e1c	100	96.667	Seriola_dumerili
ENSXCOG00000012418	eif4e1c	100	96.190	ENSSLDG00000019869	eif4e1c	100	96.190	Seriola_lalandi_dorsalis
ENSXCOG00000012418	eif4e1c	100	97.619	ENSSPAG00000021325	eif4e1c	88	97.619	Stegastes_partitus
ENSXCOG00000012418	eif4e1c	100	92.857	ENSTRUG00000024897	eif4e1c	100	92.857	Takifugu_rubripes
ENSXCOG00000012418	eif4e1c	100	80.476	ENSTNIG00000008670	eif4e1c	100	80.476	Tetraodon_nigroviridis
ENSXCOG00000012418	eif4e1c	100	100.000	ENSXMAG00000023567	eif4e1c	100	100.000	Xiphophorus_maculatus