EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000012420 (Gene tree)
Gene ID: -
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 13520 bases
Position: chrKQ557220.1:20307806-20321325
Accession: ZDB-GENE-030131-4076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000016462	Suf	PF05843.14	7.5e-10	1	1
ENSXCOP00000016462	S1	PF00575.23	2.8e-50	1	3
ENSXCOP00000016462	S1	PF00575.23	2.8e-50	2	3
ENSXCOP00000016462	S1	PF00575.23	2.8e-50	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000016669	-	4962	-	ENSXCOP00000016462	1653 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012420's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012420	pdcd11	99	38.723	ENSG00000148843	PDCD11	98	45.545	Homo_sapiens
ENSXCOG00000012420	pdcd11	100	62.101	ENSAPOG00000015629	pdcd11	100	61.949	Acanthochromis_polyacanthus
ENSXCOG00000012420	pdcd11	99	38.766	ENSAMEG00000017935	PDCD11	99	38.892	Ailuropoda_melanoleuca
ENSXCOG00000012420	pdcd11	52	68.054	ENSACIG00000006458	-	98	67.942	Amphilophus_citrinellus
ENSXCOG00000012420	pdcd11	100	61.729	ENSAOCG00000015287	pdcd11	100	61.687	Amphiprion_ocellaris
ENSXCOG00000012420	pdcd11	57	67.066	ENSAPEG00000020240	pdcd11	98	67.066	Amphiprion_percula
ENSXCOG00000012420	pdcd11	99	60.980	ENSATEG00000021043	pdcd11	99	60.998	Anabas_testudineus
ENSXCOG00000012420	pdcd11	99	38.639	ENSAPLG00000010301	PDCD11	99	38.342	Anas_platyrhynchos
ENSXCOG00000012420	pdcd11	99	38.886	ENSACAG00000004796	PDCD11	99	38.886	Anolis_carolinensis
ENSXCOG00000012420	pdcd11	99	38.363	ENSANAG00000034576	PDCD11	99	38.234	Aotus_nancymaae
ENSXCOG00000012420	pdcd11	87	87.330	ENSACLG00000018236	pdcd11	92	87.330	Astatotilapia_calliptera
ENSXCOG00000012420	pdcd11	96	48.330	ENSAMXG00000005458	pdcd11	99	52.915	Astyanax_mexicanus
ENSXCOG00000012420	pdcd11	99	39.267	ENSBTAG00000009715	PDCD11	99	39.153	Bos_taurus
ENSXCOG00000012420	pdcd11	97	49.555	ENSCJAG00000018257	PDCD11	99	38.494	Callithrix_jacchus
ENSXCOG00000012420	pdcd11	99	39.130	ENSCAFG00000010411	PDCD11	99	39.018	Canis_familiaris
ENSXCOG00000012420	pdcd11	99	39.666	ENSCAFG00020010369	PDCD11	99	39.570	Canis_lupus_dingo
ENSXCOG00000012420	pdcd11	99	39.193	ENSCHIG00000025218	PDCD11	99	39.027	Capra_hircus
ENSXCOG00000012420	pdcd11	96	38.560	ENSTSYG00000033423	PDCD11	98	38.449	Carlito_syrichta
ENSXCOG00000012420	pdcd11	92	34.653	ENSCAPG00000005386	PDCD11	95	43.750	Cavia_aperea
ENSXCOG00000012420	pdcd11	99	38.462	ENSCPOG00000010957	PDCD11	99	38.297	Cavia_porcellus
ENSXCOG00000012420	pdcd11	97	48.415	ENSCCAG00000018950	PDCD11	95	47.977	Cebus_capucinus
ENSXCOG00000012420	pdcd11	99	38.457	ENSCATG00000044331	PDCD11	98	45.274	Cercocebus_atys
ENSXCOG00000012420	pdcd11	99	38.720	ENSCLAG00000001029	PDCD11	99	38.507	Chinchilla_lanigera
ENSXCOG00000012420	pdcd11	99	38.703	ENSCSAG00000005346	PDCD11	99	38.478	Chlorocebus_sabaeus
ENSXCOG00000012420	pdcd11	76	68.519	ENSCHOG00000004796	PDCD11	73	68.519	Choloepus_hoffmanni
ENSXCOG00000012420	pdcd11	90	48.955	ENSCPBG00000024487	PDCD11	96	49.401	Chrysemys_picta_bellii
ENSXCOG00000012420	pdcd11	95	36.471	ENSCING00000002715	-	87	36.686	Ciona_intestinalis
ENSXCOG00000012420	pdcd11	97	48.138	ENSCANG00000043300	PDCD11	99	38.669	Colobus_angolensis_palliatus
ENSXCOG00000012420	pdcd11	99	38.684	ENSCGRG00001006458	Pdcd11	99	38.486	Cricetulus_griseus_chok1gshd
ENSXCOG00000012420	pdcd11	99	38.556	ENSCGRG00000003583	Pdcd11	99	38.359	Cricetulus_griseus_crigri
ENSXCOG00000012420	pdcd11	97	57.435	ENSCSEG00000010739	pdcd11	96	60.190	Cynoglossus_semilaevis
ENSXCOG00000012420	pdcd11	100	64.790	ENSCVAG00000018903	pdcd11	100	64.790	Cyprinodon_variegatus
ENSXCOG00000012420	pdcd11	100	45.073	ENSDARG00000052480	pdcd11	100	44.906	Danio_rerio
ENSXCOG00000012420	pdcd11	99	38.918	ENSDNOG00000013838	PDCD11	99	38.400	Dasypus_novemcinctus
ENSXCOG00000012420	pdcd11	99	39.071	ENSDORG00000010420	Pdcd11	99	38.717	Dipodomys_ordii
ENSXCOG00000012420	pdcd11	90	45.161	ENSETEG00000000813	PDCD11	91	45.161	Echinops_telfairi
ENSXCOG00000012420	pdcd11	72	36.346	ENSEBUG00000002358	-	90	35.348	Eptatretus_burgeri
ENSXCOG00000012420	pdcd11	95	39.667	ENSEASG00005015159	PDCD11	99	39.768	Equus_asinus_asinus
ENSXCOG00000012420	pdcd11	99	39.397	ENSECAG00000020507	PDCD11	99	39.389	Equus_caballus
ENSXCOG00000012420	pdcd11	86	58.696	ENSEEUG00000009245	PDCD11	88	58.696	Erinaceus_europaeus
ENSXCOG00000012420	pdcd11	100	49.727	ENSELUG00000004211	pdcd11	99	49.618	Esox_lucius
ENSXCOG00000012420	pdcd11	99	38.242	ENSFCAG00000002384	PDCD11	99	38.347	Felis_catus
ENSXCOG00000012420	pdcd11	99	39.913	ENSFALG00000008775	PDCD11	99	40.043	Ficedula_albicollis
ENSXCOG00000012420	pdcd11	99	38.650	ENSFDAG00000009532	PDCD11	99	38.703	Fukomys_damarensis
ENSXCOG00000012420	pdcd11	84	92.273	ENSFHEG00000022997	pdcd11	87	92.273	Fundulus_heteroclitus
ENSXCOG00000012420	pdcd11	93	58.482	ENSGMOG00000004186	pdcd11	94	59.292	Gadus_morhua
ENSXCOG00000012420	pdcd11	78	39.789	ENSGALG00000008265	PDCD11	99	39.533	Gallus_gallus
ENSXCOG00000012420	pdcd11	99	74.304	ENSGAFG00000012806	pdcd11	100	75.504	Gambusia_affinis
ENSXCOG00000012420	pdcd11	100	57.809	ENSGACG00000018233	pdcd11	100	57.858	Gasterosteus_aculeatus
ENSXCOG00000012420	pdcd11	91	48.071	ENSGAGG00000024314	PDCD11	99	41.686	Gopherus_agassizii
ENSXCOG00000012420	pdcd11	97	48.555	ENSGGOG00000011621	PDCD11	95	48.555	Gorilla_gorilla
ENSXCOG00000012420	pdcd11	99	61.377	ENSHBUG00000020226	pdcd11	99	61.335	Haplochromis_burtoni
ENSXCOG00000012420	pdcd11	99	38.998	ENSHGLG00000001462	PDCD11	99	38.998	Heterocephalus_glaber_female
ENSXCOG00000012420	pdcd11	99	38.572	ENSHGLG00100018779	PDCD11	99	38.572	Heterocephalus_glaber_male
ENSXCOG00000012420	pdcd11	100	57.450	ENSHCOG00000016006	pdcd11	100	57.285	Hippocampus_comes
ENSXCOG00000012420	pdcd11	64	49.866	ENSIPUG00000015102	pdcd11	99	51.123	Ictalurus_punctatus
ENSXCOG00000012420	pdcd11	99	39.266	ENSSTOG00000014553	PDCD11	99	39.320	Ictidomys_tridecemlineatus
ENSXCOG00000012420	pdcd11	99	39.247	ENSJJAG00000015523	Pdcd11	99	39.247	Jaculus_jaculus
ENSXCOG00000012420	pdcd11	53	67.508	ENSKMAG00000021182	pdcd11	99	67.508	Kryptolebias_marmoratus
ENSXCOG00000012420	pdcd11	99	48.414	ENSLOCG00000011818	pdcd11	99	48.542	Lepisosteus_oculatus
ENSXCOG00000012420	pdcd11	99	39.177	ENSLAFG00000008398	PDCD11	99	39.102	Loxodonta_africana
ENSXCOG00000012420	pdcd11	99	45.025	ENSMFAG00000044058	PDCD11	99	38.433	Macaca_fascicularis
ENSXCOG00000012420	pdcd11	99	45.274	ENSMMUG00000007058	PDCD11	99	38.486	Macaca_mulatta
ENSXCOG00000012420	pdcd11	97	49.107	ENSMNEG00000040726	PDCD11	99	38.457	Macaca_nemestrina
ENSXCOG00000012420	pdcd11	99	39.102	ENSMLEG00000040978	PDCD11	99	39.161	Mandrillus_leucophaeus
ENSXCOG00000012420	pdcd11	100	60.551	ENSMAMG00000009572	pdcd11	100	60.044	Mastacembelus_armatus
ENSXCOG00000012420	pdcd11	99	61.301	ENSMZEG00005008949	pdcd11	99	61.237	Maylandia_zebra
ENSXCOG00000012420	pdcd11	99	39.316	ENSMGAG00000010482	PDCD11	99	39.755	Meleagris_gallopavo
ENSXCOG00000012420	pdcd11	82	49.555	ENSMAUG00000014924	Pdcd11	91	42.270	Mesocricetus_auratus
ENSXCOG00000012420	pdcd11	99	39.627	ENSMICG00000012421	PDCD11	99	39.423	Microcebus_murinus
ENSXCOG00000012420	pdcd11	97	50.742	ENSMOCG00000021792	Pdcd11	95	50.445	Microtus_ochrogaster
ENSXCOG00000012420	pdcd11	99	55.663	ENSMMOG00000007572	pdcd11	97	68.939	Mola_mola
ENSXCOG00000012420	pdcd11	87	48.214	ENSMODG00000011077	PDCD11	90	48.665	Monodelphis_domestica
ENSXCOG00000012420	pdcd11	95	62.800	ENSMALG00000003859	pdcd11	99	69.589	Monopterus_albus
ENSXCOG00000012420	pdcd11	99	37.708	MGP_CAROLIEiJ_G0023050	Pdcd11	99	37.687	Mus_caroli
ENSXCOG00000012420	pdcd11	99	37.607	ENSMUSG00000025047	Pdcd11	99	37.553	Mus_musculus
ENSXCOG00000012420	pdcd11	99	37.726	MGP_PahariEiJ_G0014540	Pdcd11	99	37.865	Mus_pahari
ENSXCOG00000012420	pdcd11	99	37.627	MGP_SPRETEiJ_G0023971	Pdcd11	99	37.147	Mus_spretus
ENSXCOG00000012420	pdcd11	96	49.405	ENSMPUG00000016829	PDCD11	99	39.531	Mustela_putorius_furo
ENSXCOG00000012420	pdcd11	99	39.158	ENSMLUG00000004997	PDCD11	99	38.778	Myotis_lucifugus
ENSXCOG00000012420	pdcd11	97	49.573	ENSNGAG00000018143	Pdcd11	99	39.119	Nannospalax_galili
ENSXCOG00000012420	pdcd11	81	62.633	ENSNBRG00000021596	pdcd11	92	70.163	Neolamprologus_brichardi
ENSXCOG00000012420	pdcd11	99	37.346	ENSNLEG00000026700	PDCD11	99	37.433	Nomascus_leucogenys
ENSXCOG00000012420	pdcd11	54	66.355	ENSMEUG00000013719	-	58	66.355	Notamacropus_eugenii
ENSXCOG00000012420	pdcd11	99	37.533	ENSOPRG00000010593	PDCD11	99	37.800	Ochotona_princeps
ENSXCOG00000012420	pdcd11	99	37.836	ENSODEG00000008079	PDCD11	99	37.764	Octodon_degus
ENSXCOG00000012420	pdcd11	99	61.873	ENSONIG00000018835	pdcd11	99	61.645	Oreochromis_niloticus
ENSXCOG00000012420	pdcd11	99	38.345	ENSOANG00000001636	-	99	38.203	Ornithorhynchus_anatinus
ENSXCOG00000012420	pdcd11	98	48.286	ENSOCUG00000006312	PDCD11	95	48.286	Oryctolagus_cuniculus
ENSXCOG00000012420	pdcd11	50	68.677	ENSORLG00000012995	pdcd11	96	68.445	Oryzias_latipes
ENSXCOG00000012420	pdcd11	100	59.572	ENSORLG00020003642	pdcd11	100	59.243	Oryzias_latipes_hni
ENSXCOG00000012420	pdcd11	100	59.769	ENSORLG00015001618	pdcd11	100	59.550	Oryzias_latipes_hsok
ENSXCOG00000012420	pdcd11	63	54.252	ENSOMEG00000010904	pdcd11	98	54.082	Oryzias_melastigma
ENSXCOG00000012420	pdcd11	99	39.490	ENSOGAG00000008683	PDCD11	99	39.352	Otolemur_garnettii
ENSXCOG00000012420	pdcd11	99	38.980	ENSOARG00000003719	PDCD11	99	38.815	Ovis_aries
ENSXCOG00000012420	pdcd11	99	38.095	ENSPPAG00000024593	PDCD11	98	45.274	Pan_paniscus
ENSXCOG00000012420	pdcd11	99	38.294	ENSPPRG00000015133	PDCD11	95	48.580	Panthera_pardus
ENSXCOG00000012420	pdcd11	99	38.576	ENSPTIG00000011433	PDCD11	99	38.735	Panthera_tigris_altaica
ENSXCOG00000012420	pdcd11	99	38.625	ENSPTRG00000002911	PDCD11	98	45.274	Pan_troglodytes
ENSXCOG00000012420	pdcd11	97	49.107	ENSPANG00000020959	PDCD11	99	38.539	Papio_anubis
ENSXCOG00000012420	pdcd11	99	47.775	ENSPKIG00000000973	pdcd11	97	51.346	Paramormyrops_kingsleyae
ENSXCOG00000012420	pdcd11	82	40.027	ENSPSIG00000005102	PDCD11	97	39.852	Pelodiscus_sinensis
ENSXCOG00000012420	pdcd11	82	60.476	ENSPMGG00000007289	pdcd11	100	60.362	Periophthalmus_magnuspinnatus
ENSXCOG00000012420	pdcd11	97	47.110	ENSPEMG00000010315	Pdcd11	99	48.415	Peromyscus_maniculatus_bairdii
ENSXCOG00000012420	pdcd11	93	57.014	ENSPMAG00000003098	pdcd11	99	34.744	Petromyzon_marinus
ENSXCOG00000012420	pdcd11	97	47.368	ENSPCIG00000001118	PDCD11	95	48.397	Phascolarctos_cinereus
ENSXCOG00000012420	pdcd11	100	75.083	ENSPFOG00000006012	pdcd11	100	75.055	Poecilia_formosa
ENSXCOG00000012420	pdcd11	100	77.376	ENSPLAG00000014494	pdcd11	98	86.644	Poecilia_latipinna
ENSXCOG00000012420	pdcd11	100	59.560	ENSPMEG00000018177	pdcd11	98	85.410	Poecilia_mexicana
ENSXCOG00000012420	pdcd11	100	66.303	ENSPREG00000000475	pdcd11	100	74.614	Poecilia_reticulata
ENSXCOG00000012420	pdcd11	99	36.911	ENSPPYG00000002621	PDCD11	99	36.911	Pongo_abelii
ENSXCOG00000012420	pdcd11	61	48.148	ENSPCAG00000011663	PDCD11	65	48.148	Procavia_capensis
ENSXCOG00000012420	pdcd11	91	40.031	ENSPCOG00000023327	PDCD11	99	39.118	Propithecus_coquereli
ENSXCOG00000012420	pdcd11	93	48.665	ENSPVAG00000004176	PDCD11	94	41.192	Pteropus_vampyrus
ENSXCOG00000012420	pdcd11	99	61.246	ENSPNYG00000003979	pdcd11	99	61.182	Pundamilia_nyererei
ENSXCOG00000012420	pdcd11	95	47.959	ENSPNAG00000017225	pdcd11	97	49.405	Pygocentrus_nattereri
ENSXCOG00000012420	pdcd11	96	50.148	ENSRNOG00000020304	Pdcd11	99	37.982	Rattus_norvegicus
ENSXCOG00000012420	pdcd11	99	38.641	ENSRBIG00000011889	PDCD11	98	44.417	Rhinopithecus_bieti
ENSXCOG00000012420	pdcd11	99	38.588	ENSRROG00000030483	PDCD11	98	44.417	Rhinopithecus_roxellana
ENSXCOG00000012420	pdcd11	59	33.155	YMR229C	-	94	33.229	Saccharomyces_cerevisiae
ENSXCOG00000012420	pdcd11	97	49.405	ENSSBOG00000030308	PDCD11	99	35.889	Saimiri_boliviensis_boliviensis
ENSXCOG00000012420	pdcd11	97	47.181	ENSSHAG00000018258	PDCD11	99	37.720	Sarcophilus_harrisii
ENSXCOG00000012420	pdcd11	100	47.256	ENSSFOG00015003881	pdcd11	100	47.259	Scleropages_formosus
ENSXCOG00000012420	pdcd11	100	61.602	ENSSMAG00000006612	pdcd11	100	61.310	Scophthalmus_maximus
ENSXCOG00000012420	pdcd11	97	60.432	ENSSDUG00000021302	pdcd11	99	68.147	Seriola_dumerili
ENSXCOG00000012420	pdcd11	51	68.076	ENSSLDG00000010228	pdcd11	98	68.298	Seriola_lalandi_dorsalis
ENSXCOG00000012420	pdcd11	76	63.265	ENSSARG00000002540	PDCD11	65	63.265	Sorex_araneus
ENSXCOG00000012420	pdcd11	97	60.205	ENSSPAG00000017558	pdcd11	100	60.603	Stegastes_partitus
ENSXCOG00000012420	pdcd11	99	38.842	ENSSSCG00000010599	PDCD11	99	39.317	Sus_scrofa
ENSXCOG00000012420	pdcd11	71	60.524	ENSTRUG00000014291	pdcd11	99	60.445	Takifugu_rubripes
ENSXCOG00000012420	pdcd11	99	55.704	ENSTNIG00000012085	pdcd11	99	55.752	Tetraodon_nigroviridis
ENSXCOG00000012420	pdcd11	96	47.633	ENSTBEG00000001893	PDCD11	93	47.633	Tupaia_belangeri
ENSXCOG00000012420	pdcd11	85	65.421	ENSTTRG00000003356	PDCD11	80	65.421	Tursiops_truncatus
ENSXCOG00000012420	pdcd11	99	39.622	ENSUAMG00000018015	PDCD11	96	42.829	Ursus_americanus
ENSXCOG00000012420	pdcd11	99	38.625	ENSUMAG00000023567	PDCD11	99	38.625	Ursus_maritimus
ENSXCOG00000012420	pdcd11	54	56.522	ENSVPAG00000007405	PDCD11	63	53.012	Vicugna_pacos
ENSXCOG00000012420	pdcd11	99	38.845	ENSVVUG00000004457	PDCD11	99	38.734	Vulpes_vulpes
ENSXCOG00000012420	pdcd11	97	51.253	ENSXETG00000009482	pdcd11	96	52.089	Xenopus_tropicalis
ENSXCOG00000012420	pdcd11	100	70.867	ENSXMAG00000004638	pdcd11	100	79.592	Xiphophorus_maculatus