EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000012487 (Gene tree)
Gene ID: -
Gene Symbol: exosc5
Alias: si:ch211-194n6.2|zgc:153707
Full Name: exosome component 5
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 3262 bases
Position: chrKQ557210.1:30614934-30618195
Accession: ZDB-GENE-060503-675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000016532	RNase_PH	PF01138.21	4.4e-24	1	1
ENSXCOP00000016532	RNase_PH_C	PF03725.15	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000016746	-	711	-	ENSXCOP00000016532	236 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012487's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000012487	exosc5	56	31.469	ENSXCOG00000015017	exosc4	58	31.469

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012487	exosc5	89	66.507	ENSG00000077348	EXOSC5	97	75.000	Homo_sapiens
ENSXCOG00000012487	exosc5	93	89.498	ENSAPOG00000012910	exosc5	99	89.498	Acanthochromis_polyacanthus
ENSXCOG00000012487	exosc5	89	67.464	ENSAMEG00000011623	EXOSC5	89	67.464	Ailuropoda_melanoleuca
ENSXCOG00000012487	exosc5	93	88.128	ENSACIG00000024067	exosc5	100	88.128	Amphilophus_citrinellus
ENSXCOG00000012487	exosc5	92	90.826	ENSAOCG00000006601	exosc5	99	90.826	Amphiprion_ocellaris
ENSXCOG00000012487	exosc5	92	90.826	ENSAPEG00000014199	exosc5	99	90.826	Amphiprion_percula
ENSXCOG00000012487	exosc5	93	89.545	ENSATEG00000008886	exosc5	100	89.545	Anabas_testudineus
ENSXCOG00000012487	exosc5	87	62.621	ENSACAG00000003784	EXOSC5	92	62.621	Anolis_carolinensis
ENSXCOG00000012487	exosc5	89	51.196	ENSANAG00000022449	EXOSC5	86	51.196	Aotus_nancymaae
ENSXCOG00000012487	exosc5	100	85.593	ENSACLG00000020944	exosc5	100	85.593	Astatotilapia_calliptera
ENSXCOG00000012487	exosc5	57	33.562	ENSAMXG00000030867	exosc4	60	33.562	Astyanax_mexicanus
ENSXCOG00000012487	exosc5	93	78.636	ENSAMXG00000034946	exosc5	100	78.636	Astyanax_mexicanus
ENSXCOG00000012487	exosc5	89	67.464	ENSBTAG00000016034	EXOSC5	89	67.464	Bos_taurus
ENSXCOG00000012487	exosc5	87	30.000	WBGene00000798	crn-5	96	30.000	Caenorhabditis_elegans
ENSXCOG00000012487	exosc5	89	66.507	ENSCJAG00000020152	EXOSC5	89	66.507	Callithrix_jacchus
ENSXCOG00000012487	exosc5	89	66.986	ENSCAFG00000032654	EXOSC5	89	66.986	Canis_familiaris
ENSXCOG00000012487	exosc5	89	66.986	ENSCAFG00020014770	EXOSC5	89	66.986	Canis_lupus_dingo
ENSXCOG00000012487	exosc5	89	67.464	ENSCHIG00000026498	EXOSC5	89	67.464	Capra_hircus
ENSXCOG00000012487	exosc5	96	62.389	ENSTSYG00000014183	EXOSC5	96	62.389	Carlito_syrichta
ENSXCOG00000012487	exosc5	78	46.486	ENSCAPG00000005778	EXOSC5	100	46.486	Cavia_aperea
ENSXCOG00000012487	exosc5	90	65.094	ENSCPOG00000035731	EXOSC5	88	65.094	Cavia_porcellus
ENSXCOG00000012487	exosc5	89	66.986	ENSCCAG00000013179	EXOSC5	89	66.986	Cebus_capucinus
ENSXCOG00000012487	exosc5	89	66.986	ENSCATG00000044084	EXOSC5	89	66.986	Cercocebus_atys
ENSXCOG00000012487	exosc5	89	65.550	ENSCLAG00000001186	EXOSC5	89	65.550	Chinchilla_lanigera
ENSXCOG00000012487	exosc5	89	66.507	ENSCSAG00000003522	EXOSC5	80	66.507	Chlorocebus_sabaeus
ENSXCOG00000012487	exosc5	89	65.072	ENSCHOG00000000047	EXOSC5	89	65.072	Choloepus_hoffmanni
ENSXCOG00000012487	exosc5	88	37.963	ENSCING00000005595	-	92	37.963	Ciona_intestinalis
ENSXCOG00000012487	exosc5	88	35.023	ENSCSAVG00000009006	-	92	35.023	Ciona_savignyi
ENSXCOG00000012487	exosc5	89	66.507	ENSCANG00000039325	EXOSC5	89	66.507	Colobus_angolensis_palliatus
ENSXCOG00000012487	exosc5	89	66.507	ENSCGRG00001017207	Exosc5	89	66.507	Cricetulus_griseus_chok1gshd
ENSXCOG00000012487	exosc5	81	55.208	ENSCGRG00000003031	Exosc5	100	55.208	Cricetulus_griseus_crigri
ENSXCOG00000012487	exosc5	93	86.301	ENSCSEG00000007190	exosc5	100	86.301	Cynoglossus_semilaevis
ENSXCOG00000012487	exosc5	93	93.182	ENSCVAG00000009396	exosc5	100	93.182	Cyprinodon_variegatus
ENSXCOG00000012487	exosc5	88	81.643	ENSDARG00000040557	exosc5	93	81.643	Danio_rerio
ENSXCOG00000012487	exosc5	57	32.877	ENSDARG00000103432	exosc4	61	32.877	Danio_rerio
ENSXCOG00000012487	exosc5	90	63.208	ENSDNOG00000017137	EXOSC5	92	63.208	Dasypus_novemcinctus
ENSXCOG00000012487	exosc5	89	65.550	ENSDORG00000003611	Exosc5	91	65.550	Dipodomys_ordii
ENSXCOG00000012487	exosc5	88	37.681	FBgn0037815	Rrp46	89	37.681	Drosophila_melanogaster
ENSXCOG00000012487	exosc5	89	66.507	ENSETEG00000009358	EXOSC5	89	66.507	Echinops_telfairi
ENSXCOG00000012487	exosc5	70	31.073	ENSEBUG00000014277	exosc4	72	31.073	Eptatretus_burgeri
ENSXCOG00000012487	exosc5	92	56.422	ENSEBUG00000000312	exosc5	96	56.422	Eptatretus_burgeri
ENSXCOG00000012487	exosc5	89	66.986	ENSEASG00005006327	EXOSC5	79	66.986	Equus_asinus_asinus
ENSXCOG00000012487	exosc5	89	66.986	ENSECAG00000024210	EXOSC5	89	66.986	Equus_caballus
ENSXCOG00000012487	exosc5	76	61.453	ENSEEUG00000007299	EXOSC5	75	61.453	Erinaceus_europaeus
ENSXCOG00000012487	exosc5	56	33.566	ENSELUG00000021011	exosc4	58	33.566	Esox_lucius
ENSXCOG00000012487	exosc5	93	80.365	ENSELUG00000021719	exosc5	100	80.365	Esox_lucius
ENSXCOG00000012487	exosc5	59	30.000	ENSELUG00000015515	exosc6	53	30.000	Esox_lucius
ENSXCOG00000012487	exosc5	89	66.507	ENSFCAG00000033818	EXOSC5	89	66.507	Felis_catus
ENSXCOG00000012487	exosc5	81	67.895	ENSFALG00000012886	EXOSC5	99	67.895	Ficedula_albicollis
ENSXCOG00000012487	exosc5	89	65.550	ENSFDAG00000001207	EXOSC5	89	65.550	Fukomys_damarensis
ENSXCOG00000012487	exosc5	60	30.263	ENSFHEG00000017490	exosc6	54	30.263	Fundulus_heteroclitus
ENSXCOG00000012487	exosc5	100	91.949	ENSFHEG00000021919	exosc5	100	91.949	Fundulus_heteroclitus
ENSXCOG00000012487	exosc5	89	81.991	ENSGMOG00000015865	exosc5	98	81.991	Gadus_morhua
ENSXCOG00000012487	exosc5	55	32.857	ENSGMOG00000002113	exosc4	56	32.857	Gadus_morhua
ENSXCOG00000012487	exosc5	100	97.881	ENSGAFG00000015767	exosc5	100	97.881	Gambusia_affinis
ENSXCOG00000012487	exosc5	90	85.377	ENSGACG00000012986	exosc5	99	85.377	Gasterosteus_aculeatus
ENSXCOG00000012487	exosc5	65	66.234	ENSGAGG00000003166	EXOSC5	84	66.234	Gopherus_agassizii
ENSXCOG00000012487	exosc5	90	66.038	ENSGGOG00000008428	EXOSC5	90	66.038	Gorilla_gorilla
ENSXCOG00000012487	exosc5	100	85.593	ENSHBUG00000010082	exosc5	100	85.593	Haplochromis_burtoni
ENSXCOG00000012487	exosc5	89	65.072	ENSHGLG00000008975	EXOSC5	89	65.072	Heterocephalus_glaber_female
ENSXCOG00000012487	exosc5	89	65.550	ENSHGLG00100016097	EXOSC5	89	65.550	Heterocephalus_glaber_male
ENSXCOG00000012487	exosc5	99	78.112	ENSHCOG00000017818	exosc5	97	78.112	Hippocampus_comes
ENSXCOG00000012487	exosc5	93	78.995	ENSIPUG00000011820	Exosc5	100	78.995	Ictalurus_punctatus
ENSXCOG00000012487	exosc5	96	62.832	ENSSTOG00000019738	EXOSC5	96	62.832	Ictidomys_tridecemlineatus
ENSXCOG00000012487	exosc5	89	64.593	ENSJJAG00000013914	Exosc5	94	64.593	Jaculus_jaculus
ENSXCOG00000012487	exosc5	93	91.364	ENSKMAG00000009517	exosc5	100	91.364	Kryptolebias_marmoratus
ENSXCOG00000012487	exosc5	93	73.182	ENSLBEG00000018216	exosc5	100	73.182	Labrus_bergylta
ENSXCOG00000012487	exosc5	76	55.556	ENSLACG00000018233	EXOSC5	90	55.556	Latimeria_chalumnae
ENSXCOG00000012487	exosc5	67	30.178	ENSLOCG00000008878	exosc4	68	30.178	Lepisosteus_oculatus
ENSXCOG00000012487	exosc5	93	70.222	ENSLOCG00000014220	exosc5	96	70.222	Lepisosteus_oculatus
ENSXCOG00000012487	exosc5	89	66.507	ENSLAFG00000013753	EXOSC5	89	66.507	Loxodonta_africana
ENSXCOG00000012487	exosc5	89	66.986	ENSMFAG00000045851	EXOSC5	80	66.986	Macaca_fascicularis
ENSXCOG00000012487	exosc5	89	66.986	ENSMMUG00000014345	EXOSC5	89	66.986	Macaca_mulatta
ENSXCOG00000012487	exosc5	89	66.986	ENSMNEG00000044403	EXOSC5	80	66.986	Macaca_nemestrina
ENSXCOG00000012487	exosc5	89	66.986	ENSMLEG00000042915	EXOSC5	89	66.986	Mandrillus_leucophaeus
ENSXCOG00000012487	exosc5	100	84.322	ENSMAMG00000014323	exosc5	100	84.322	Mastacembelus_armatus
ENSXCOG00000012487	exosc5	100	85.593	ENSMZEG00005024196	exosc5	100	85.593	Maylandia_zebra
ENSXCOG00000012487	exosc5	84	62.626	ENSMAUG00000010419	Exosc5	87	62.626	Mesocricetus_auratus
ENSXCOG00000012487	exosc5	89	67.464	ENSMICG00000002016	EXOSC5	89	67.464	Microcebus_murinus
ENSXCOG00000012487	exosc5	92	65.138	ENSMOCG00000002379	Exosc5	93	65.138	Microtus_ochrogaster
ENSXCOG00000012487	exosc5	100	84.322	ENSMMOG00000004799	exosc5	100	84.322	Mola_mola
ENSXCOG00000012487	exosc5	90	65.094	ENSMODG00000008642	EXOSC5	89	65.094	Monodelphis_domestica
ENSXCOG00000012487	exosc5	67	30.769	ENSMODG00000010435	EXOSC4	79	30.769	Monodelphis_domestica
ENSXCOG00000012487	exosc5	93	88.636	ENSMALG00000009453	exosc5	100	88.636	Monopterus_albus
ENSXCOG00000012487	exosc5	92	66.055	MGP_CAROLIEiJ_G0029376	Exosc5	93	66.055	Mus_caroli
ENSXCOG00000012487	exosc5	92	66.055	ENSMUSG00000061286	Exosc5	93	66.055	Mus_musculus
ENSXCOG00000012487	exosc5	92	66.055	MGP_PahariEiJ_G0021229	Exosc5	93	66.055	Mus_pahari
ENSXCOG00000012487	exosc5	92	66.055	MGP_SPRETEiJ_G0030472	Exosc5	93	66.055	Mus_spretus
ENSXCOG00000012487	exosc5	89	66.986	ENSMPUG00000017649	EXOSC5	89	66.986	Mustela_putorius_furo
ENSXCOG00000012487	exosc5	95	62.500	ENSMLUG00000013104	EXOSC5	95	62.500	Myotis_lucifugus
ENSXCOG00000012487	exosc5	89	66.986	ENSNGAG00000005929	Exosc5	89	66.986	Nannospalax_galili
ENSXCOG00000012487	exosc5	93	89.954	ENSNBRG00000004340	exosc5	100	89.954	Neolamprologus_brichardi
ENSXCOG00000012487	exosc5	89	66.507	ENSNLEG00000013696	EXOSC5	89	66.507	Nomascus_leucogenys
ENSXCOG00000012487	exosc5	89	50.239	ENSMEUG00000010485	EXOSC5	90	50.239	Notamacropus_eugenii
ENSXCOG00000012487	exosc5	89	45.794	ENSODEG00000000427	EXOSC5	87	46.729	Octodon_degus
ENSXCOG00000012487	exosc5	100	86.017	ENSONIG00000004023	exosc5	100	86.017	Oreochromis_niloticus
ENSXCOG00000012487	exosc5	89	66.029	ENSOCUG00000011497	EXOSC5	89	66.029	Oryctolagus_cuniculus
ENSXCOG00000012487	exosc5	93	90.411	ENSORLG00000023035	exosc5	100	90.411	Oryzias_latipes
ENSXCOG00000012487	exosc5	93	90.411	ENSORLG00020017279	exosc5	100	90.411	Oryzias_latipes_hni
ENSXCOG00000012487	exosc5	93	90.411	ENSORLG00015001719	exosc5	100	90.411	Oryzias_latipes_hsok
ENSXCOG00000012487	exosc5	93	88.584	ENSOMEG00000021763	exosc5	100	88.584	Oryzias_melastigma
ENSXCOG00000012487	exosc5	89	66.986	ENSOGAG00000016075	EXOSC5	89	66.986	Otolemur_garnettii
ENSXCOG00000012487	exosc5	89	67.464	ENSOARG00000007412	EXOSC5	89	67.464	Ovis_aries
ENSXCOG00000012487	exosc5	89	66.986	ENSPPAG00000024210	EXOSC5	89	66.986	Pan_paniscus
ENSXCOG00000012487	exosc5	89	66.986	ENSPPRG00000003713	EXOSC5	89	66.986	Panthera_pardus
ENSXCOG00000012487	exosc5	89	66.986	ENSPTIG00000015884	EXOSC5	89	66.986	Panthera_tigris_altaica
ENSXCOG00000012487	exosc5	89	66.986	ENSPTRG00000011024	EXOSC5	89	66.986	Pan_troglodytes
ENSXCOG00000012487	exosc5	89	66.986	ENSPANG00000004945	EXOSC5	89	66.986	Papio_anubis
ENSXCOG00000012487	exosc5	94	81.532	ENSPKIG00000013092	exosc5	96	81.532	Paramormyrops_kingsleyae
ENSXCOG00000012487	exosc5	55	32.143	ENSPMGG00000019307	exosc4	57	32.143	Periophthalmus_magnuspinnatus
ENSXCOG00000012487	exosc5	93	81.735	ENSPMGG00000015323	exosc5	98	81.735	Periophthalmus_magnuspinnatus
ENSXCOG00000012487	exosc5	89	66.507	ENSPEMG00000018589	Exosc5	89	66.507	Peromyscus_maniculatus_bairdii
ENSXCOG00000012487	exosc5	89	65.550	ENSPCIG00000016745	EXOSC5	94	65.550	Phascolarctos_cinereus
ENSXCOG00000012487	exosc5	93	96.364	ENSPFOG00000014158	exosc5	100	96.364	Poecilia_formosa
ENSXCOG00000012487	exosc5	100	97.034	ENSPLAG00000005701	exosc5	91	97.034	Poecilia_latipinna
ENSXCOG00000012487	exosc5	100	98.305	ENSPMEG00000020815	exosc5	100	98.305	Poecilia_mexicana
ENSXCOG00000012487	exosc5	100	97.458	ENSPREG00000017723	exosc5	100	97.458	Poecilia_reticulata
ENSXCOG00000012487	exosc5	79	65.054	ENSPPYG00000010016	-	99	65.054	Pongo_abelii
ENSXCOG00000012487	exosc5	89	58.852	ENSPCAG00000005946	EXOSC5	89	58.852	Procavia_capensis
ENSXCOG00000012487	exosc5	89	66.507	ENSPCOG00000020582	EXOSC5	89	66.507	Propithecus_coquereli
ENSXCOG00000012487	exosc5	89	49.282	ENSPVAG00000013083	EXOSC5	86	49.282	Pteropus_vampyrus
ENSXCOG00000012487	exosc5	100	85.593	ENSPNYG00000007712	exosc5	100	85.593	Pundamilia_nyererei
ENSXCOG00000012487	exosc5	89	80.861	ENSPNAG00000030099	exosc5	96	80.861	Pygocentrus_nattereri
ENSXCOG00000012487	exosc5	60	32.895	ENSPNAG00000008453	exosc6	55	32.895	Pygocentrus_nattereri
ENSXCOG00000012487	exosc5	92	65.596	ENSRNOG00000020635	Exosc5	93	65.596	Rattus_norvegicus
ENSXCOG00000012487	exosc5	89	66.986	ENSRBIG00000040585	EXOSC5	80	66.986	Rhinopithecus_bieti
ENSXCOG00000012487	exosc5	89	66.986	ENSRROG00000044020	EXOSC5	80	66.986	Rhinopithecus_roxellana
ENSXCOG00000012487	exosc5	89	56.459	ENSSBOG00000031753	EXOSC5	87	58.373	Saimiri_boliviensis_boliviensis
ENSXCOG00000012487	exosc5	96	80.088	ENSSFOG00015022999	exosc5	100	80.088	Scleropages_formosus
ENSXCOG00000012487	exosc5	100	84.322	ENSSMAG00000020240	exosc5	98	84.322	Scophthalmus_maximus
ENSXCOG00000012487	exosc5	100	86.017	ENSSDUG00000000339	exosc5	91	86.017	Seriola_dumerili
ENSXCOG00000012487	exosc5	100	86.017	ENSSLDG00000005218	exosc5	91	86.017	Seriola_lalandi_dorsalis
ENSXCOG00000012487	exosc5	89	51.196	ENSSARG00000010083	-	90	51.196	Sorex_araneus
ENSXCOG00000012487	exosc5	93	90.411	ENSSPAG00000018306	exosc5	99	90.411	Stegastes_partitus
ENSXCOG00000012487	exosc5	78	65.574	ENSSSCG00000003015	EXOSC5	100	61.856	Sus_scrofa
ENSXCOG00000012487	exosc5	82	68.041	ENSTGUG00000014136	EXOSC5	99	68.041	Taeniopygia_guttata
ENSXCOG00000012487	exosc5	93	86.301	ENSTRUG00000009689	exosc5	100	86.301	Takifugu_rubripes
ENSXCOG00000012487	exosc5	58	31.081	ENSTNIG00000004018	exosc6	59	31.081	Tetraodon_nigroviridis
ENSXCOG00000012487	exosc5	55	32.143	ENSTNIG00000008519	exosc4	57	32.143	Tetraodon_nigroviridis
ENSXCOG00000012487	exosc5	93	78.571	ENSTNIG00000000238	exosc5	100	78.571	Tetraodon_nigroviridis
ENSXCOG00000012487	exosc5	87	62.927	ENSTBEG00000007203	EXOSC5	100	62.927	Tupaia_belangeri
ENSXCOG00000012487	exosc5	89	66.986	ENSTTRG00000012863	EXOSC5	89	66.986	Tursiops_truncatus
ENSXCOG00000012487	exosc5	89	53.110	ENSUAMG00000010104	EXOSC5	87	53.110	Ursus_americanus
ENSXCOG00000012487	exosc5	76	67.222	ENSUMAG00000005660	EXOSC5	81	67.222	Ursus_maritimus
ENSXCOG00000012487	exosc5	89	66.986	ENSVVUG00000005320	EXOSC5	89	66.986	Vulpes_vulpes
ENSXCOG00000012487	exosc5	88	67.308	ENSXETG00000018752	exosc5	92	67.308	Xenopus_tropicalis
ENSXCOG00000012487	exosc5	56	31.469	ENSXMAG00000016287	exosc4	58	31.469	Xiphophorus_maculatus
ENSXCOG00000012487	exosc5	89	99.048	ENSXMAG00000004786	exosc5	71	99.048	Xiphophorus_maculatus