EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000012490 (Gene tree)
Gene ID: -
Gene Symbol: nmd3
Alias: nmd3l|zgc:113103
Full Name: NMD3 ribosome export adaptor
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 13065 bases
Position: chrKQ557210.1:9671089-9684153
Accession: ZDB-GENE-050320-149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000016541	NMD3	PF04981.13	8.9e-20	1	1
ENSXCOP00000016544	NMD3	PF04981.13	9e-20	1	1
ENSXCOP00000016548	NMD3	PF04981.13	1.1e-19	1	1
ENSXCOP00000016547	NMD3	PF04981.13	6.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000016762	-	1131	-	ENSXCOP00000016548	376 (aa)	-	-
ENSXCOT00000016761	-	1158	-	ENSXCOP00000016547	385 (aa)	-	-
ENSXCOT00000016757	-	1089	-	ENSXCOP00000016544	362 (aa)	-	-
ENSXCOT00000016756	-	1083	-	ENSXCOP00000016541	360 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012490's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012490	nmd3	87	71.495	ENSG00000169251	NMD3	89	73.563	Homo_sapiens
ENSXCOG00000012490	nmd3	81	98.734	ENSAPOG00000022912	nmd3	68	92.271	Acanthochromis_polyacanthus
ENSXCOG00000012490	nmd3	87	72.430	ENSAMEG00000001584	NMD3	69	71.362	Ailuropoda_melanoleuca
ENSXCOG00000012490	nmd3	81	96.203	ENSACIG00000015196	nmd3	69	90.821	Amphilophus_citrinellus
ENSXCOG00000012490	nmd3	82	97.561	ENSAOCG00000009086	nmd3	68	93.237	Amphiprion_ocellaris
ENSXCOG00000012490	nmd3	82	96.341	ENSAPEG00000000329	nmd3	68	92.754	Amphiprion_percula
ENSXCOG00000012490	nmd3	82	96.341	ENSATEG00000014351	nmd3	68	92.271	Anabas_testudineus
ENSXCOG00000012490	nmd3	86	71.717	ENSAPLG00000014786	NMD3	74	59.839	Anas_platyrhynchos
ENSXCOG00000012490	nmd3	87	73.023	ENSACAG00000007349	NMD3	69	71.831	Anolis_carolinensis
ENSXCOG00000012490	nmd3	86	71.429	ENSANAG00000026434	NMD3	68	71.635	Aotus_nancymaae
ENSXCOG00000012490	nmd3	81	96.203	ENSACLG00000015520	nmd3	68	91.304	Astatotilapia_calliptera
ENSXCOG00000012490	nmd3	82	93.902	ENSAMXG00000014415	nmd3	68	86.957	Astyanax_mexicanus
ENSXCOG00000012490	nmd3	81	75.000	ENSBTAG00000016228	NMD3	69	70.892	Bos_taurus
ENSXCOG00000012490	nmd3	81	62.025	WBGene00012030	T25G3.3	60	62.338	Caenorhabditis_elegans
ENSXCOG00000012490	nmd3	85	73.077	ENSCJAG00000002900	NMD3	67	73.077	Callithrix_jacchus
ENSXCOG00000012490	nmd3	85	71.154	ENSCAFG00000014352	NMD3	66	71.154	Canis_familiaris
ENSXCOG00000012490	nmd3	87	71.028	ENSCAFG00020021145	NMD3	69	69.953	Canis_lupus_dingo
ENSXCOG00000012490	nmd3	81	76.250	ENSCHIG00000016015	NMD3	68	71.981	Capra_hircus
ENSXCOG00000012490	nmd3	81	77.215	ENSTSYG00000002155	NMD3	69	70.093	Carlito_syrichta
ENSXCOG00000012490	nmd3	63	68.027	ENSCAPG00000017861	NMD3	61	68.027	Cavia_aperea
ENSXCOG00000012490	nmd3	69	68.027	ENSCPOG00000005953	NMD3	60	68.027	Cavia_porcellus
ENSXCOG00000012490	nmd3	87	71.963	ENSCCAG00000037460	NMD3	69	70.892	Cebus_capucinus
ENSXCOG00000012490	nmd3	87	71.963	ENSCATG00000030022	NMD3	69	70.423	Cercocebus_atys
ENSXCOG00000012490	nmd3	87	73.364	ENSCLAG00000003155	NMD3	89	72.059	Chinchilla_lanigera
ENSXCOG00000012490	nmd3	87	71.963	ENSCSAG00000012333	NMD3	69	70.423	Chlorocebus_sabaeus
ENSXCOG00000012490	nmd3	73	72.897	ENSCHOG00000001240	NMD3	51	75.000	Choloepus_hoffmanni
ENSXCOG00000012490	nmd3	82	84.146	ENSCPBG00000018318	NMD3	62	83.333	Chrysemys_picta_bellii
ENSXCOG00000012490	nmd3	80	58.228	ENSCING00000002129	-	73	42.537	Ciona_intestinalis
ENSXCOG00000012490	nmd3	89	68.444	ENSCANG00000042939	NMD3	53	76.596	Colobus_angolensis_palliatus
ENSXCOG00000012490	nmd3	77	71.963	ENSCGRG00001001792	Nmd3	74	70.561	Cricetulus_griseus_chok1gshd
ENSXCOG00000012490	nmd3	85	71.963	ENSCGRG00000007947	Nmd3	78	61.569	Cricetulus_griseus_crigri
ENSXCOG00000012490	nmd3	84	90.338	ENSCSEG00000017954	nmd3	68	90.338	Cynoglossus_semilaevis
ENSXCOG00000012490	nmd3	82	96.341	ENSCVAG00000004672	nmd3	56	96.341	Cyprinodon_variegatus
ENSXCOG00000012490	nmd3	81	89.873	ENSDARG00000015676	nmd3	71	75.877	Danio_rerio
ENSXCOG00000012490	nmd3	87	70.561	ENSDNOG00000045222	NMD3	69	69.014	Dasypus_novemcinctus
ENSXCOG00000012490	nmd3	86	67.000	ENSDORG00000005716	Nmd3	92	74.286	Dipodomys_ordii
ENSXCOG00000012490	nmd3	87	61.165	FBgn0023542	Nmd3	54	73.016	Drosophila_melanogaster
ENSXCOG00000012490	nmd3	86	73.239	ENSETEG00000003168	NMD3	69	71.698	Echinops_telfairi
ENSXCOG00000012490	nmd3	72	68.421	ENSEBUG00000014316	nmd3	50	44.813	Eptatretus_burgeri
ENSXCOG00000012490	nmd3	80	78.205	ENSEASG00005018672	NMD3	69	69.953	Equus_asinus_asinus
ENSXCOG00000012490	nmd3	79	78.205	ENSECAG00000000188	NMD3	67	71.635	Equus_caballus
ENSXCOG00000012490	nmd3	80	68.367	ENSEEUG00000010642	-	62	68.367	Erinaceus_europaeus
ENSXCOG00000012490	nmd3	84	86.957	ENSELUG00000024123	nmd3	68	86.957	Esox_lucius
ENSXCOG00000012490	nmd3	87	71.495	ENSFCAG00000022867	NMD3	69	70.423	Felis_catus
ENSXCOG00000012490	nmd3	83	71.084	ENSFALG00000008711	NMD3	73	68.722	Ficedula_albicollis
ENSXCOG00000012490	nmd3	86	65.686	ENSFDAG00000012197	-	60	65.686	Fukomys_damarensis
ENSXCOG00000012490	nmd3	86	70.698	ENSFDAG00000013724	-	68	70.673	Fukomys_damarensis
ENSXCOG00000012490	nmd3	84	94.203	ENSFHEG00000000415	nmd3	68	94.203	Fundulus_heteroclitus
ENSXCOG00000012490	nmd3	82	90.123	ENSGMOG00000009675	nmd3	70	81.643	Gadus_morhua
ENSXCOG00000012490	nmd3	87	72.558	ENSGALG00000009533	NMD3	74	63.454	Gallus_gallus
ENSXCOG00000012490	nmd3	85	97.619	ENSGAFG00000012798	nmd3	65	97.619	Gambusia_affinis
ENSXCOG00000012490	nmd3	82	95.122	ENSGACG00000010028	nmd3	69	87.264	Gasterosteus_aculeatus
ENSXCOG00000012490	nmd3	82	84.146	ENSGAGG00000006556	NMD3	59	84.146	Gopherus_agassizii
ENSXCOG00000012490	nmd3	87	72.430	ENSGGOG00000007157	NMD3	69	70.892	Gorilla_gorilla
ENSXCOG00000012490	nmd3	82	63.855	ENSGGOG00000028590	-	55	67.742	Gorilla_gorilla
ENSXCOG00000012490	nmd3	99	91.589	ENSHBUG00000001781	nmd3	71	91.304	Haplochromis_burtoni
ENSXCOG00000012490	nmd3	86	73.364	ENSHGLG00000014451	-	68	73.077	Heterocephalus_glaber_female
ENSXCOG00000012490	nmd3	82	71.084	ENSHGLG00000010477	-	57	71.084	Heterocephalus_glaber_female
ENSXCOG00000012490	nmd3	86	73.364	ENSHGLG00100006613	-	68	73.077	Heterocephalus_glaber_male
ENSXCOG00000012490	nmd3	82	71.084	ENSHGLG00100001042	-	58	71.084	Heterocephalus_glaber_male
ENSXCOG00000012490	nmd3	82	92.683	ENSHCOG00000004292	nmd3	62	87.923	Hippocampus_comes
ENSXCOG00000012490	nmd3	83	85.047	ENSIPUG00000005073	nmd3	75	72.619	Ictalurus_punctatus
ENSXCOG00000012490	nmd3	87	72.897	ENSSTOG00000001899	NMD3	69	71.362	Ictidomys_tridecemlineatus
ENSXCOG00000012490	nmd3	85	71.963	ENSJJAG00000019759	Nmd3	71	70.093	Jaculus_jaculus
ENSXCOG00000012490	nmd3	86	97.531	ENSKMAG00000020427	nmd3	59	97.561	Kryptolebias_marmoratus
ENSXCOG00000012490	nmd3	82	95.122	ENSLBEG00000022216	nmd3	59	95.122	Labrus_bergylta
ENSXCOG00000012490	nmd3	84	71.717	ENSLACG00000005731	NMD3	64	72.109	Latimeria_chalumnae
ENSXCOG00000012490	nmd3	81	89.873	ENSLOCG00000003561	nmd3	71	77.974	Lepisosteus_oculatus
ENSXCOG00000012490	nmd3	87	68.224	ENSLAFG00000007231	NMD3	75	58.527	Loxodonta_africana
ENSXCOG00000012490	nmd3	87	71.963	ENSMFAG00000040934	NMD3	69	70.423	Macaca_fascicularis
ENSXCOG00000012490	nmd3	89	68.444	ENSMMUG00000009564	NMD3	68	71.963	Macaca_mulatta
ENSXCOG00000012490	nmd3	87	71.963	ENSMNEG00000034626	NMD3	69	70.423	Macaca_nemestrina
ENSXCOG00000012490	nmd3	81	94.937	ENSMAMG00000012427	nmd3	68	89.855	Mastacembelus_armatus
ENSXCOG00000012490	nmd3	99	91.589	ENSMZEG00005016888	nmd3	71	91.304	Maylandia_zebra
ENSXCOG00000012490	nmd3	87	71.628	ENSMGAG00000010498	NMD3	74	62.651	Meleagris_gallopavo
ENSXCOG00000012490	nmd3	87	71.495	ENSMAUG00000000633	Nmd3	69	70.093	Mesocricetus_auratus
ENSXCOG00000012490	nmd3	80	78.205	ENSMICG00000049196	NMD3	68	71.635	Microcebus_murinus
ENSXCOG00000012490	nmd3	87	71.963	ENSMOCG00000005180	Nmd3	75	62.353	Microtus_ochrogaster
ENSXCOG00000012490	nmd3	84	91.787	ENSMMOG00000012765	nmd3	68	91.787	Mola_mola
ENSXCOG00000012490	nmd3	81	97.468	ENSMALG00000009256	nmd3	68	91.304	Monopterus_albus
ENSXCOG00000012490	nmd3	86	71.495	MGP_CAROLIEiJ_G0025069	Nmd3	83	76.190	Mus_caroli
ENSXCOG00000012490	nmd3	86	71.963	ENSMUSG00000027787	Nmd3	83	76.190	Mus_musculus
ENSXCOG00000012490	nmd3	87	71.963	MGP_PahariEiJ_G0026512	Nmd3	88	73.134	Mus_pahari
ENSXCOG00000012490	nmd3	86	71.963	MGP_SPRETEiJ_G0026011	Nmd3	83	76.190	Mus_spretus
ENSXCOG00000012490	nmd3	87	71.963	ENSMPUG00000002955	NMD3	69	70.892	Mustela_putorius_furo
ENSXCOG00000012490	nmd3	85	72.897	ENSMLUG00000000701	NMD3	69	71.028	Myotis_lucifugus
ENSXCOG00000012490	nmd3	86	71.362	ENSNGAG00000012307	Nmd3	74	61.847	Nannospalax_galili
ENSXCOG00000012490	nmd3	84	97.468	ENSNBRG00000003324	nmd3	62	95.122	Neolamprologus_brichardi
ENSXCOG00000012490	nmd3	87	71.963	ENSNLEG00000004655	NMD3	68	71.963	Nomascus_leucogenys
ENSXCOG00000012490	nmd3	86	72.897	ENSODEG00000006270	NMD3	69	73.077	Octodon_degus
ENSXCOG00000012490	nmd3	81	97.468	ENSONIG00000003643	nmd3	68	90.821	Oreochromis_niloticus
ENSXCOG00000012490	nmd3	86	71.090	ENSOCUG00000017454	NMD3	68	72.115	Oryctolagus_cuniculus
ENSXCOG00000012490	nmd3	81	97.468	ENSORLG00000006279	nmd3	68	90.338	Oryzias_latipes
ENSXCOG00000012490	nmd3	81	97.468	ENSORLG00020003843	nmd3	68	89.855	Oryzias_latipes_hni
ENSXCOG00000012490	nmd3	81	96.203	ENSORLG00015006379	nmd3	68	89.372	Oryzias_latipes_hsok
ENSXCOG00000012490	nmd3	81	98.734	ENSOMEG00000012144	nmd3	68	91.787	Oryzias_melastigma
ENSXCOG00000012490	nmd3	87	72.430	ENSOGAG00000014910	NMD3	67	72.816	Otolemur_garnettii
ENSXCOG00000012490	nmd3	80	76.250	ENSOARG00000001883	NMD3	66	72.115	Ovis_aries
ENSXCOG00000012490	nmd3	87	71.495	ENSPPAG00000043829	NMD3	69	70.892	Pan_paniscus
ENSXCOG00000012490	nmd3	87	70.642	ENSPPRG00000000724	NMD3	69	70.642	Panthera_pardus
ENSXCOG00000012490	nmd3	87	71.963	ENSPTIG00000016761	NMD3	69	70.892	Panthera_tigris_altaica
ENSXCOG00000012490	nmd3	87	71.963	ENSPTRG00000015586	NMD3	69	71.362	Pan_troglodytes
ENSXCOG00000012490	nmd3	88	68.750	ENSPANG00000006665	NMD3	67	68.750	Papio_anubis
ENSXCOG00000012490	nmd3	87	83.645	ENSPKIG00000009928	nmd3	71	77.056	Paramormyrops_kingsleyae
ENSXCOG00000012490	nmd3	82	84.146	ENSPSIG00000007591	NMD3	59	84.146	Pelodiscus_sinensis
ENSXCOG00000012490	nmd3	76	91.121	ENSPMGG00000014015	nmd3	56	91.121	Periophthalmus_magnuspinnatus
ENSXCOG00000012490	nmd3	87	72.897	ENSPEMG00000021880	Nmd3	71	71.495	Peromyscus_maniculatus_bairdii
ENSXCOG00000012490	nmd3	85	74.747	ENSPCIG00000020869	NMD3	69	71.362	Phascolarctos_cinereus
ENSXCOG00000012490	nmd3	83	98.131	ENSPFOG00000012103	nmd3	68	98.068	Poecilia_formosa
ENSXCOG00000012490	nmd3	83	98.131	ENSPLAG00000008087	nmd3	68	98.068	Poecilia_latipinna
ENSXCOG00000012490	nmd3	83	98.131	ENSPMEG00000008506	nmd3	68	98.068	Poecilia_mexicana
ENSXCOG00000012490	nmd3	85	99.065	ENSPREG00000001848	nmd3	71	99.034	Poecilia_reticulata
ENSXCOG00000012490	nmd3	87	72.430	ENSPPYG00000014263	NMD3	69	70.892	Pongo_abelii
ENSXCOG00000012490	nmd3	61	66.355	ENSPCAG00000009851	NMD3	50	66.355	Procavia_capensis
ENSXCOG00000012490	nmd3	73	68.902	ENSPVAG00000003301	NMD3	53	68.902	Pteropus_vampyrus
ENSXCOG00000012490	nmd3	81	96.203	ENSPNYG00000006778	nmd3	68	91.304	Pundamilia_nyererei
ENSXCOG00000012490	nmd3	81	89.873	ENSPNAG00000009442	nmd3	68	85.507	Pygocentrus_nattereri
ENSXCOG00000012490	nmd3	87	70.561	ENSRNOG00000009310	Nmd3	69	69.159	Rattus_norvegicus
ENSXCOG00000012490	nmd3	85	71.963	ENSRBIG00000040379	NMD3	68	70.423	Rhinopithecus_bieti
ENSXCOG00000012490	nmd3	87	71.963	ENSRROG00000036181	NMD3	69	70.423	Rhinopithecus_roxellana
ENSXCOG00000012490	nmd3	82	51.899	YHR170W	NMD3	58	49.206	Saccharomyces_cerevisiae
ENSXCOG00000012490	nmd3	87	72.430	ENSSBOG00000024021	NMD3	69	71.362	Saimiri_boliviensis_boliviensis
ENSXCOG00000012490	nmd3	85	74.490	ENSSHAG00000016044	NMD3	69	70.561	Sarcophilus_harrisii
ENSXCOG00000012490	nmd3	84	86.341	ENSSFOG00015003609	nmd3	68	86.473	Scleropages_formosus
ENSXCOG00000012490	nmd3	85	91.589	ENSSMAG00000012887	nmd3	71	84.416	Scophthalmus_maximus
ENSXCOG00000012490	nmd3	84	93.237	ENSSDUG00000023721	nmd3	68	93.237	Seriola_dumerili
ENSXCOG00000012490	nmd3	84	93.237	ENSSLDG00000006565	nmd3	68	93.237	Seriola_lalandi_dorsalis
ENSXCOG00000012490	nmd3	85	73.832	ENSSARG00000010402	NMD3	71	72.300	Sorex_araneus
ENSXCOG00000012490	nmd3	84	73.737	ENSSPUG00000018791	NMD3	68	72.330	Sphenodon_punctatus
ENSXCOG00000012490	nmd3	81	98.734	ENSSPAG00000014328	nmd3	68	92.271	Stegastes_partitus
ENSXCOG00000012490	nmd3	80	76.923	ENSSSCG00000022952	NMD3	68	71.154	Sus_scrofa
ENSXCOG00000012490	nmd3	73	84.615	ENSTGUG00000015141	-	58	81.818	Taeniopygia_guttata
ENSXCOG00000012490	nmd3	81	85.000	ENSTGUG00000011140	-	59	83.133	Taeniopygia_guttata
ENSXCOG00000012490	nmd3	82	93.902	ENSTRUG00000005958	nmd3	68	90.821	Takifugu_rubripes
ENSXCOG00000012490	nmd3	73	64.423	ENSTBEG00000011783	-	52	66.327	Tupaia_belangeri
ENSXCOG00000012490	nmd3	81	77.215	ENSTTRG00000012938	NMD3	55	80.645	Tursiops_truncatus
ENSXCOG00000012490	nmd3	59	69.388	ENSUAMG00000009305	-	61	67.857	Ursus_americanus
ENSXCOG00000012490	nmd3	85	72.727	ENSUMAG00000011070	NMD3	68	72.596	Ursus_maritimus
ENSXCOG00000012490	nmd3	81	76.250	ENSVPAG00000008779	NMD3	69	69.953	Vicugna_pacos
ENSXCOG00000012490	nmd3	87	71.028	ENSVVUG00000023055	NMD3	68	71.292	Vulpes_vulpes
ENSXCOG00000012490	nmd3	87	75.814	ENSXETG00000027727	nmd3	75	65.748	Xenopus_tropicalis
ENSXCOG00000012490	nmd3	83	99.533	ENSXMAG00000018406	nmd3	70	95.023	Xiphophorus_maculatus