EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000012530 (Gene tree)
Gene ID: -
Gene Symbol: srp19
Alias: zgc:63961
Full Name: signal recognition particle 19
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 8860 bases
Position: chrKQ557204.1:32581405-32590264
Accession: ZDB-GENE-040426-2657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000016597	SRP19	PF01922.17	1.8e-24	1	1
ENSXCOP00000016596	SRP19	PF01922.17	1.8e-24	1	1
ENSXCOP00000016595	SRP19	PF01922.17	2.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000016810	-	453	-	ENSXCOP00000016595	150 (aa)	-	-
ENSXCOT00000016811	-	417	-	ENSXCOP00000016596	138 (aa)	-	-
ENSXCOT00000016812	-	420	-	ENSXCOP00000016597	139 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012530's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012530	srp19	82	61.017	ENSG00000153037	SRP19	98	65.657	Homo_sapiens
ENSXCOG00000012530	srp19	86	82.114	ENSAPOG00000002199	srp19	96	75.735	Acanthochromis_polyacanthus
ENSXCOG00000012530	srp19	68	68.421	ENSAMEG00000012623	SRP19	68	66.000	Ailuropoda_melanoleuca
ENSXCOG00000012530	srp19	72	88.000	ENSACIG00000005082	srp19	70	88.000	Amphilophus_citrinellus
ENSXCOG00000012530	srp19	86	81.301	ENSAOCG00000002718	srp19	96	75.000	Amphiprion_ocellaris
ENSXCOG00000012530	srp19	86	80.488	ENSAPEG00000022170	srp19	96	74.265	Amphiprion_percula
ENSXCOG00000012530	srp19	86	79.675	ENSATEG00000012472	srp19	96	73.529	Anabas_testudineus
ENSXCOG00000012530	srp19	58	65.432	ENSAPLG00000002624	SRP19	65	65.432	Anas_platyrhynchos
ENSXCOG00000012530	srp19	67	65.957	ENSACAG00000007550	SRP19	64	65.957	Anolis_carolinensis
ENSXCOG00000012530	srp19	73	48.598	ENSANAG00000029862	-	76	51.807	Aotus_nancymaae
ENSXCOG00000012530	srp19	68	68.421	ENSANAG00000032576	-	85	67.742	Aotus_nancymaae
ENSXCOG00000012530	srp19	51	56.338	ENSANAG00000030287	-	58	56.338	Aotus_nancymaae
ENSXCOG00000012530	srp19	72	83.000	ENSACLG00000006259	srp19	71	83.000	Astatotilapia_calliptera
ENSXCOG00000012530	srp19	83	72.269	ENSAMXG00000043011	srp19	84	72.269	Astyanax_mexicanus
ENSXCOG00000012530	srp19	68	67.368	ENSBTAG00000012803	SRP19	69	65.000	Bos_taurus
ENSXCOG00000012530	srp19	62	47.126	WBGene00018159	F37F2.2	65	45.652	Caenorhabditis_elegans
ENSXCOG00000012530	srp19	51	56.338	ENSCJAG00000045531	-	50	56.338	Callithrix_jacchus
ENSXCOG00000012530	srp19	77	62.727	ENSCJAG00000038676	-	85	68.817	Callithrix_jacchus
ENSXCOG00000012530	srp19	70	66.000	ENSCAFG00000031549	SRP19	69	66.000	Canis_familiaris
ENSXCOG00000012530	srp19	70	66.000	ENSCAFG00020014267	-	69	66.000	Canis_lupus_dingo
ENSXCOG00000012530	srp19	65	68.132	ENSCAFG00020022437	-	67	69.663	Canis_lupus_dingo
ENSXCOG00000012530	srp19	68	67.368	ENSCHIG00000017551	SRP19	69	65.000	Capra_hircus
ENSXCOG00000012530	srp19	68	68.421	ENSTSYG00000007875	SRP19	69	66.000	Carlito_syrichta
ENSXCOG00000012530	srp19	68	67.368	ENSCPOG00000036806	SRP19	75	65.000	Cavia_porcellus
ENSXCOG00000012530	srp19	68	68.421	ENSCCAG00000035651	-	69	66.000	Cebus_capucinus
ENSXCOG00000012530	srp19	69	48.485	ENSCCAG00000023426	-	61	48.958	Cebus_capucinus
ENSXCOG00000012530	srp19	82	55.932	ENSCATG00000039250	-	81	55.932	Cercocebus_atys
ENSXCOG00000012530	srp19	76	53.211	ENSCATG00000040513	-	67	53.211	Cercocebus_atys
ENSXCOG00000012530	srp19	67	69.149	ENSCLAG00000004791	-	65	69.149	Chinchilla_lanigera
ENSXCOG00000012530	srp19	67	62.766	ENSCLAG00000016055	-	68	59.000	Chinchilla_lanigera
ENSXCOG00000012530	srp19	68	68.421	ENSCHOG00000013452	SRP19	69	66.000	Choloepus_hoffmanni
ENSXCOG00000012530	srp19	72	63.366	ENSCPBG00000013903	SRP19	71	63.366	Chrysemys_picta_bellii
ENSXCOG00000012530	srp19	68	65.263	ENSCGRG00001020510	Srp19	69	63.000	Cricetulus_griseus_chok1gshd
ENSXCOG00000012530	srp19	62	57.471	ENSCGRG00000008542	-	66	57.471	Cricetulus_griseus_crigri
ENSXCOG00000012530	srp19	86	76.230	ENSCSEG00000010039	srp19	87	76.230	Cynoglossus_semilaevis
ENSXCOG00000012530	srp19	83	84.034	ENSCVAG00000017621	srp19	96	75.000	Cyprinodon_variegatus
ENSXCOG00000012530	srp19	86	71.545	ENSDARG00000035699	srp19	87	71.545	Danio_rerio
ENSXCOG00000012530	srp19	68	68.421	ENSDNOG00000013856	SRP19	69	66.000	Dasypus_novemcinctus
ENSXCOG00000012530	srp19	66	51.648	FBgn0015298	Srp19	57	51.648	Drosophila_melanogaster
ENSXCOG00000012530	srp19	82	61.017	ENSETEG00000017132	SRP19	82	61.017	Echinops_telfairi
ENSXCOG00000012530	srp19	72	73.000	ENSEBUG00000006613	srp19	71	73.000	Eptatretus_burgeri
ENSXCOG00000012530	srp19	68	67.368	ENSEASG00005015182	SRP19	69	65.000	Equus_asinus_asinus
ENSXCOG00000012530	srp19	68	67.368	ENSEEUG00000007298	SRP19	69	65.000	Erinaceus_europaeus
ENSXCOG00000012530	srp19	86	66.667	ENSELUG00000004594	srp19	87	66.667	Esox_lucius
ENSXCOG00000012530	srp19	86	76.423	ENSELUG00000007958	srp19	87	76.423	Esox_lucius
ENSXCOG00000012530	srp19	68	68.421	ENSFCAG00000025895	SRP19	90	65.657	Felis_catus
ENSXCOG00000012530	srp19	68	66.316	ENSFDAG00000013543	SRP19	69	64.000	Fukomys_damarensis
ENSXCOG00000012530	srp19	72	93.000	ENSFHEG00000000493	srp19	87	80.488	Fundulus_heteroclitus
ENSXCOG00000012530	srp19	74	73.585	ENSGMOG00000003264	srp19	96	65.041	Gadus_morhua
ENSXCOG00000012530	srp19	68	67.368	ENSGALG00000000218	SRP19	66	67.368	Gallus_gallus
ENSXCOG00000012530	srp19	80	81.739	ENSGAFG00000015815	srp19	56	81.739	Gambusia_affinis
ENSXCOG00000012530	srp19	83	78.992	ENSGACG00000001093	srp19	88	74.615	Gasterosteus_aculeatus
ENSXCOG00000012530	srp19	72	63.366	ENSGAGG00000025305	SRP19	71	63.366	Gopherus_agassizii
ENSXCOG00000012530	srp19	72	82.000	ENSHBUG00000006131	srp19	66	77.895	Haplochromis_burtoni
ENSXCOG00000012530	srp19	68	66.316	ENSHGLG00000006075	SRP19	69	64.000	Heterocephalus_glaber_female
ENSXCOG00000012530	srp19	68	66.316	ENSHGLG00100015859	SRP19	69	64.000	Heterocephalus_glaber_male
ENSXCOG00000012530	srp19	72	87.129	ENSHCOG00000013231	srp19	71	87.129	Hippocampus_comes
ENSXCOG00000012530	srp19	86	69.919	ENSIPUG00000025084	srp19	87	69.919	Ictalurus_punctatus
ENSXCOG00000012530	srp19	70	67.010	ENSSTOG00000000348	SRP19	69	66.000	Ictidomys_tridecemlineatus
ENSXCOG00000012530	srp19	68	67.368	ENSJJAG00000017185	Srp19	69	65.000	Jaculus_jaculus
ENSXCOG00000012530	srp19	86	80.488	ENSKMAG00000011155	srp19	96	74.265	Kryptolebias_marmoratus
ENSXCOG00000012530	srp19	93	73.684	ENSLBEG00000026727	srp19	96	72.059	Labrus_bergylta
ENSXCOG00000012530	srp19	83	63.333	ENSLACG00000004459	SRP19	78	63.333	Latimeria_chalumnae
ENSXCOG00000012530	srp19	72	79.000	ENSLOCG00000010302	srp19	71	79.000	Lepisosteus_oculatus
ENSXCOG00000012530	srp19	68	66.316	ENSLAFG00000002564	SRP19	69	64.000	Loxodonta_africana
ENSXCOG00000012530	srp19	82	56.780	ENSMFAG00000000554	-	84	56.780	Macaca_fascicularis
ENSXCOG00000012530	srp19	51	56.338	ENSMFAG00000040055	-	59	56.338	Macaca_fascicularis
ENSXCOG00000012530	srp19	76	52.294	ENSMMUG00000032515	-	80	52.294	Macaca_mulatta
ENSXCOG00000012530	srp19	82	57.627	ENSMMUG00000049186	-	84	57.627	Macaca_mulatta
ENSXCOG00000012530	srp19	51	54.930	ENSMNEG00000040117	-	59	54.930	Macaca_nemestrina
ENSXCOG00000012530	srp19	82	61.017	ENSMNEG00000038714	SRP19	85	67.742	Macaca_nemestrina
ENSXCOG00000012530	srp19	83	83.193	ENSMAMG00000018346	srp19	84	83.193	Mastacembelus_armatus
ENSXCOG00000012530	srp19	72	83.000	ENSMZEG00005001765	srp19	71	83.000	Maylandia_zebra
ENSXCOG00000012530	srp19	64	66.292	ENSMGAG00000006762	SRP19	68	66.292	Meleagris_gallopavo
ENSXCOG00000012530	srp19	68	66.316	ENSMICG00000000399	SRP19	85	65.591	Microcebus_murinus
ENSXCOG00000012530	srp19	70	66.000	ENSMOCG00000006534	Srp19	69	66.000	Microtus_ochrogaster
ENSXCOG00000012530	srp19	78	74.775	ENSMMOG00000010417	srp19	83	66.406	Mola_mola
ENSXCOG00000012530	srp19	72	67.327	ENSMODG00000013278	SRP19	71	67.327	Monodelphis_domestica
ENSXCOG00000012530	srp19	86	80.488	ENSMALG00000003858	srp19	96	74.265	Monopterus_albus
ENSXCOG00000012530	srp19	68	68.421	MGP_CAROLIEiJ_G0022086	Srp19	93	62.162	Mus_caroli
ENSXCOG00000012530	srp19	68	68.421	ENSMUSG00000014504	Srp19	93	62.162	Mus_musculus
ENSXCOG00000012530	srp19	68	67.368	MGP_PahariEiJ_G0018820	Srp19	93	62.162	Mus_pahari
ENSXCOG00000012530	srp19	68	68.421	MGP_SPRETEiJ_G0022998	Srp19	93	62.162	Mus_spretus
ENSXCOG00000012530	srp19	68	68.421	ENSMPUG00000012695	SRP19	68	66.000	Mustela_putorius_furo
ENSXCOG00000012530	srp19	67	62.366	ENSMLUG00000024549	-	67	62.366	Myotis_lucifugus
ENSXCOG00000012530	srp19	68	66.316	ENSMLUG00000014793	-	69	64.000	Myotis_lucifugus
ENSXCOG00000012530	srp19	69	61.458	ENSNGAG00000014524	-	77	60.000	Nannospalax_galili
ENSXCOG00000012530	srp19	68	67.368	ENSNGAG00000003440	-	69	65.000	Nannospalax_galili
ENSXCOG00000012530	srp19	67	58.511	ENSNLEG00000035364	-	64	58.511	Nomascus_leucogenys
ENSXCOG00000012530	srp19	63	68.182	ENSMEUG00000012529	SRP19	68	68.182	Notamacropus_eugenii
ENSXCOG00000012530	srp19	63	68.182	ENSOPRG00000010549	SRP19	68	68.182	Ochotona_princeps
ENSXCOG00000012530	srp19	68	64.211	ENSODEG00000019119	-	66	64.211	Octodon_degus
ENSXCOG00000012530	srp19	72	49.020	ENSODEG00000013862	-	65	49.020	Octodon_degus
ENSXCOG00000012530	srp19	72	83.000	ENSONIG00000000542	srp19	71	83.000	Oreochromis_niloticus
ENSXCOG00000012530	srp19	72	66.337	ENSOANG00000011139	SRP19	58	66.337	Ornithorhynchus_anatinus
ENSXCOG00000012530	srp19	70	64.356	ENSOCUG00000015639	SRP19	70	64.356	Oryctolagus_cuniculus
ENSXCOG00000012530	srp19	72	90.000	ENSORLG00000028267	srp19	71	90.000	Oryzias_latipes
ENSXCOG00000012530	srp19	72	90.000	ENSORLG00020015201	srp19	71	90.000	Oryzias_latipes_hni
ENSXCOG00000012530	srp19	72	90.000	ENSORLG00015007525	srp19	71	90.000	Oryzias_latipes_hsok
ENSXCOG00000012530	srp19	72	88.000	ENSOMEG00000009178	srp19	71	88.000	Oryzias_melastigma
ENSXCOG00000012530	srp19	68	67.368	ENSOGAG00000008579	SRP19	69	65.000	Otolemur_garnettii
ENSXCOG00000012530	srp19	68	67.368	ENSOARG00000016066	SRP19	69	65.000	Ovis_aries
ENSXCOG00000012530	srp19	82	61.017	ENSPPAG00000037062	SRP19	82	61.017	Pan_paniscus
ENSXCOG00000012530	srp19	68	68.421	ENSPPRG00000015591	SRP19	90	65.657	Panthera_pardus
ENSXCOG00000012530	srp19	68	68.421	ENSPTIG00000021474	SRP19	90	65.657	Panthera_tigris_altaica
ENSXCOG00000012530	srp19	82	61.017	ENSPTRG00000017136	SRP19	82	61.017	Pan_troglodytes
ENSXCOG00000012530	srp19	82	55.085	ENSPANG00000034740	-	81	55.085	Papio_anubis
ENSXCOG00000012530	srp19	82	61.017	ENSPANG00000004370	-	85	67.742	Papio_anubis
ENSXCOG00000012530	srp19	72	75.000	ENSPKIG00000018671	srp19	71	75.000	Paramormyrops_kingsleyae
ENSXCOG00000012530	srp19	64	64.045	ENSPSIG00000013811	SRP19	68	64.045	Pelodiscus_sinensis
ENSXCOG00000012530	srp19	86	79.675	ENSPMGG00000015313	srp19	87	79.675	Periophthalmus_magnuspinnatus
ENSXCOG00000012530	srp19	64	68.539	ENSPEMG00000004412	-	65	68.539	Peromyscus_maniculatus_bairdii
ENSXCOG00000012530	srp19	79	59.524	ENSPMAG00000002685	srp19	89	59.524	Petromyzon_marinus
ENSXCOG00000012530	srp19	72	66.337	ENSPCIG00000010250	SRP19	70	66.337	Phascolarctos_cinereus
ENSXCOG00000012530	srp19	86	84.553	ENSPFOG00000015887	srp19	87	84.553	Poecilia_formosa
ENSXCOG00000012530	srp19	86	84.553	ENSPLAG00000007784	srp19	87	84.553	Poecilia_latipinna
ENSXCOG00000012530	srp19	86	83.740	ENSPMEG00000003056	srp19	87	83.740	Poecilia_mexicana
ENSXCOG00000012530	srp19	86	84.553	ENSPREG00000017307	srp19	87	84.553	Poecilia_reticulata
ENSXCOG00000012530	srp19	82	61.017	ENSPPYG00000029584	SRP19	81	61.017	Pongo_abelii
ENSXCOG00000012530	srp19	68	68.421	ENSPCOG00000023239	SRP19	85	67.742	Propithecus_coquereli
ENSXCOG00000012530	srp19	68	67.368	ENSPVAG00000004895	SRP19	69	65.000	Pteropus_vampyrus
ENSXCOG00000012530	srp19	86	70.968	ENSPNAG00000009392	srp19	87	70.968	Pygocentrus_nattereri
ENSXCOG00000012530	srp19	68	67.368	ENSRNOG00000020204	Srp19	69	65.000	Rattus_norvegicus
ENSXCOG00000012530	srp19	54	62.667	ENSRBIG00000031651	-	83	62.667	Rhinopithecus_bieti
ENSXCOG00000012530	srp19	82	61.017	ENSRBIG00000015627	-	85	67.742	Rhinopithecus_bieti
ENSXCOG00000012530	srp19	82	52.991	ENSRBIG00000040440	-	81	52.991	Rhinopithecus_bieti
ENSXCOG00000012530	srp19	82	52.991	ENSRROG00000037054	-	81	52.991	Rhinopithecus_roxellana
ENSXCOG00000012530	srp19	52	61.644	ENSRROG00000037316	-	57	61.644	Rhinopithecus_roxellana
ENSXCOG00000012530	srp19	64	51.087	ENSSBOG00000032685	-	53	63.636	Saimiri_boliviensis_boliviensis
ENSXCOG00000012530	srp19	68	68.421	ENSSBOG00000028071	-	85	67.742	Saimiri_boliviensis_boliviensis
ENSXCOG00000012530	srp19	86	70.732	ENSSFOG00015022139	srp19	96	65.441	Scleropages_formosus
ENSXCOG00000012530	srp19	86	77.236	ENSSMAG00000016803	srp19	87	77.236	Scophthalmus_maximus
ENSXCOG00000012530	srp19	83	68.462	ENSSDUG00000012930	srp19	95	62.759	Seriola_dumerili
ENSXCOG00000012530	srp19	77	61.062	ENSSLDG00000021916	-	80	60.345	Seriola_lalandi_dorsalis
ENSXCOG00000012530	srp19	67	68.085	ENSSARG00000000615	SRP19	65	68.085	Sorex_araneus
ENSXCOG00000012530	srp19	66	69.565	ENSSPUG00000015769	SRP19	69	67.000	Sphenodon_punctatus
ENSXCOG00000012530	srp19	68	67.368	ENSSSCG00000026230	SRP19	69	65.000	Sus_scrofa
ENSXCOG00000012530	srp19	66	67.391	ENSTGUG00000001019	SRP19	65	67.368	Taeniopygia_guttata
ENSXCOG00000012530	srp19	93	71.533	ENSTRUG00000023119	srp19	97	70.000	Takifugu_rubripes
ENSXCOG00000012530	srp19	93	72.932	ENSTNIG00000018880	srp19	96	71.324	Tetraodon_nigroviridis
ENSXCOG00000012530	srp19	68	66.316	ENSTTRG00000001690	SRP19	69	64.000	Tursiops_truncatus
ENSXCOG00000012530	srp19	68	68.421	ENSUAMG00000000111	SRP19	69	66.000	Ursus_americanus
ENSXCOG00000012530	srp19	68	68.421	ENSUMAG00000016997	SRP19	69	66.000	Ursus_maritimus
ENSXCOG00000012530	srp19	68	67.368	ENSVPAG00000006001	SRP19	69	65.000	Vicugna_pacos
ENSXCOG00000012530	srp19	64	66.292	ENSXETG00000011993	srp19	89	53.175	Xenopus_tropicalis
ENSXCOG00000012530	srp19	86	99.160	ENSXMAG00000029788	srp19	74	99.160	Xiphophorus_maculatus