EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000012645 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 8346 bases
Position: chrKQ557210.1:31093313-31101658
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000016767	zf-C2H2	PF00096.26	6.7e-12	1	2
ENSXCOP00000016767	zf-C2H2	PF00096.26	6.7e-12	2	2
ENSXCOP00000016767	zf-met	PF12874.7	6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000016984	-	774	-	ENSXCOP00000016767	257 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012645's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000012645	-	51	41.111	ENSXCOG00000000254	-	71	41.111
ENSXCOG00000012645	-	54	37.838	ENSXCOG00000003484	-	56	37.838
ENSXCOG00000012645	-	51	36.522	ENSXCOG00000007499	zbtb41	58	36.522
ENSXCOG00000012645	-	55	44.068	ENSXCOG00000007396	-	81	44.068
ENSXCOG00000012645	-	61	44.737	ENSXCOG00000008083	-	92	43.860
ENSXCOG00000012645	-	61	44.737	ENSXCOG00000007945	-	86	44.737
ENSXCOG00000012645	-	55	41.509	ENSXCOG00000003538	-	98	42.708
ENSXCOG00000012645	-	62	43.689	ENSXCOG00000013787	-	58	43.689
ENSXCOG00000012645	-	54	45.133	ENSXCOG00000017328	-	80	45.133
ENSXCOG00000012645	-	50	36.434	ENSXCOG00000008003	-	51	36.434
ENSXCOG00000012645	-	55	48.980	ENSXCOG00000019457	-	81	48.980
ENSXCOG00000012645	-	61	46.875	ENSXCOG00000010567	-	90	43.689
ENSXCOG00000012645	-	66	42.718	ENSXCOG00000003472	-	85	41.121
ENSXCOG00000012645	-	61	48.889	ENSXCOG00000013004	-	69	48.889
ENSXCOG00000012645	-	68	42.342	ENSXCOG00000001292	-	90	42.342
ENSXCOG00000012645	-	57	42.857	ENSXCOG00000019484	-	84	42.857
ENSXCOG00000012645	-	55	40.385	ENSXCOG00000019481	-	84	40.385
ENSXCOG00000012645	-	55	43.878	ENSXCOG00000019482	-	85	43.878
ENSXCOG00000012645	-	55	37.864	ENSXCOG00000009597	ZNF319	73	37.864
ENSXCOG00000012645	-	57	38.889	ENSXCOG00000019382	-	77	38.889
ENSXCOG00000012645	-	57	42.593	ENSXCOG00000019401	-	82	42.593
ENSXCOG00000012645	-	54	39.286	ENSXCOG00000003493	-	75	39.286
ENSXCOG00000012645	-	52	45.652	ENSXCOG00000008062	-	97	45.122
ENSXCOG00000012645	-	64	46.067	ENSXCOG00000000528	-	80	46.067
ENSXCOG00000012645	-	50	37.963	ENSXCOG00000009794	-	72	37.963
ENSXCOG00000012645	-	55	38.739	ENSXCOG00000009798	-	67	38.739
ENSXCOG00000012645	-	63	46.377	ENSXCOG00000001226	-	87	46.377
ENSXCOG00000012645	-	54	47.368	ENSXCOG00000009003	-	93	47.368
ENSXCOG00000012645	-	72	47.458	ENSXCOG00000007994	-	88	47.458
ENSXCOG00000012645	-	55	39.286	ENSXCOG00000003451	-	98	39.286
ENSXCOG00000012645	-	69	46.465	ENSXCOG00000007414	-	90	46.465
ENSXCOG00000012645	-	53	35.165	ENSXCOG00000003001	-	86	35.165
ENSXCOG00000012645	-	56	41.228	ENSXCOG00000006614	-	92	40.952
ENSXCOG00000012645	-	53	40.449	ENSXCOG00000003532	-	73	40.449
ENSXCOG00000012645	-	69	44.762	ENSXCOG00000001200	-	94	44.762
ENSXCOG00000012645	-	81	32.203	ENSXCOG00000019149	znf526	57	32.203
ENSXCOG00000012645	-	55	44.156	ENSXCOG00000015947	-	93	44.156
ENSXCOG00000012645	-	62	46.226	ENSXCOG00000008116	-	95	46.226
ENSXCOG00000012645	-	51	43.617	ENSXCOG00000010950	si:dkey-210j14.3	79	43.617
ENSXCOG00000012645	-	65	43.750	ENSXCOG00000008978	-	91	43.750
ENSXCOG00000012645	-	63	40.909	ENSXCOG00000012458	-	71	40.909
ENSXCOG00000012645	-	60	47.059	ENSXCOG00000007406	-	97	45.614
ENSXCOG00000012645	-	72	46.491	ENSXCOG00000007937	-	76	46.491
ENSXCOG00000012645	-	72	41.525	ENSXCOG00000001116	-	89	45.161
ENSXCOG00000012645	-	54	45.045	ENSXCOG00000018253	-	91	45.045
ENSXCOG00000012645	-	65	41.379	ENSXCOG00000003431	-	78	41.818
ENSXCOG00000012645	-	54	39.216	ENSXCOG00000003435	-	87	39.216
ENSXCOG00000012645	-	61	47.619	ENSXCOG00000017871	zgc:113343	63	47.619
ENSXCOG00000012645	-	55	42.342	ENSXCOG00000012921	-	94	42.342
ENSXCOG00000012645	-	62	42.991	ENSXCOG00000016567	-	81	42.991
ENSXCOG00000012645	-	61	37.273	ENSXCOG00000008567	prdm5	70	37.273
ENSXCOG00000012645	-	51	41.111	ENSXCOG00000007413	-	68	41.111
ENSXCOG00000012645	-	64	47.872	ENSXCOG00000019443	-	99	48.148
ENSXCOG00000012645	-	52	38.889	ENSXCOG00000009992	zbtb47b	87	38.889
ENSXCOG00000012645	-	50	51.724	ENSXCOG00000009665	-	82	51.724
ENSXCOG00000012645	-	57	45.918	ENSXCOG00000003530	-	85	45.918
ENSXCOG00000012645	-	70	42.982	ENSXCOG00000002898	-	95	44.828
ENSXCOG00000012645	-	61	45.556	ENSXCOG00000016860	-	97	42.857
ENSXCOG00000012645	-	60	44.828	ENSXCOG00000013066	-	72	44.828
ENSXCOG00000012645	-	55	47.368	ENSXCOG00000016307	-	84	47.368
ENSXCOG00000012645	-	50	39.815	ENSXCOG00000013870	-	72	39.815
ENSXCOG00000012645	-	62	46.774	ENSXCOG00000000354	-	70	46.774
ENSXCOG00000012645	-	64	48.077	ENSXCOG00000007981	-	84	48.077
ENSXCOG00000012645	-	66	42.105	ENSXCOG00000007376	-	91	42.105
ENSXCOG00000012645	-	61	45.045	ENSXCOG00000011725	-	95	44.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012645	-	50	74.167	ENSAPOG00000001563	-	79	55.814	Acanthochromis_polyacanthus
ENSXCOG00000012645	-	62	69.421	ENSCSEG00000008903	-	90	69.421	Cynoglossus_semilaevis
ENSXCOG00000012645	-	61	74.775	ENSGACG00000001377	-	94	74.775	Gasterosteus_aculeatus
ENSXCOG00000012645	-	51	69.355	ENSHCOG00000000511	-	62	69.355	Hippocampus_comes
ENSXCOG00000012645	-	53	67.568	ENSLBEG00000018509	-	89	67.568	Labrus_bergylta
ENSXCOG00000012645	-	58	72.951	ENSMAMG00000018137	-	62	72.951	Mastacembelus_armatus
ENSXCOG00000012645	-	51	78.947	ENSMMOG00000009733	-	82	78.947	Mola_mola
ENSXCOG00000012645	-	61	66.234	ENSNBRG00000008223	-	72	83.036	Neolamprologus_brichardi
ENSXCOG00000012645	-	61	80.000	ENSONIG00000017233	-	93	80.000	Oreochromis_niloticus
ENSXCOG00000012645	-	61	72.269	ENSPREG00000021246	-	83	72.269	Poecilia_reticulata
ENSXCOG00000012645	-	51	75.207	ENSSDUG00000004892	-	58	75.207	Seriola_dumerili
ENSXCOG00000012645	-	51	75.207	ENSSLDG00000005670	-	89	75.207	Seriola_lalandi_dorsalis
ENSXCOG00000012645	-	61	98.361	ENSXMAG00000000866	-	52	98.361	Xiphophorus_maculatus