EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000012654 (Gene tree)
Gene ID: -
Gene Symbol: larp6a
Alias: acheron|achn|fi75f12|larp6|wu:fi75f12|zgc:66107
Full Name: La ribonucleoprotein domain family%2C member 6a
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 5402 bases
Position: chrKQ557219.1:24414928-24420329
Accession: ZDB-GENE-030131-6403
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000016776	La	PF05383.17	8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000016993	-	1464	-	ENSXCOP00000016776	487 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012654's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000012654	larp6a	82	31.407	ENSXCOG00000018917	-	88	31.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012654	larp6a	89	59.193	ENSG00000166173	LARP6	87	59.193	Homo_sapiens
ENSXCOG00000012654	larp6a	98	93.067	ENSAPOG00000021773	larp6a	69	93.067	Acanthochromis_polyacanthus
ENSXCOG00000012654	larp6a	86	60.508	ENSAMEG00000008897	LARP6	97	60.508	Ailuropoda_melanoleuca
ENSXCOG00000012654	larp6a	98	92.857	ENSACIG00000005166	larp6a	95	92.484	Amphilophus_citrinellus
ENSXCOG00000012654	larp6a	98	92.647	ENSAOCG00000002284	larp6a	69	92.647	Amphiprion_ocellaris
ENSXCOG00000012654	larp6a	98	92.647	ENSAPEG00000008077	larp6a	93	92.276	Amphiprion_percula
ENSXCOG00000012654	larp6a	98	92.857	ENSATEG00000004018	larp6a	68	92.857	Anabas_testudineus
ENSXCOG00000012654	larp6a	85	59.579	ENSAPLG00000009914	LARP6	98	59.579	Anas_platyrhynchos
ENSXCOG00000012654	larp6a	86	59.574	ENSACAG00000008613	LARP6	98	60.284	Anolis_carolinensis
ENSXCOG00000012654	larp6a	89	59.417	ENSANAG00000024860	LARP6	87	59.417	Aotus_nancymaae
ENSXCOG00000012654	larp6a	98	92.647	ENSACLG00000018561	larp6a	67	92.647	Astatotilapia_calliptera
ENSXCOG00000012654	larp6a	85	39.161	ENSAMXG00000036816	-	94	40.559	Astyanax_mexicanus
ENSXCOG00000012654	larp6a	98	78.702	ENSAMXG00000029387	larp6a	74	79.513	Astyanax_mexicanus
ENSXCOG00000012654	larp6a	89	60.314	ENSBTAG00000003915	LARP6	87	60.314	Bos_taurus
ENSXCOG00000012654	larp6a	89	59.101	ENSCJAG00000018642	-	87	59.101	Callithrix_jacchus
ENSXCOG00000012654	larp6a	94	56.701	ENSCJAG00000046236	-	87	58.652	Callithrix_jacchus
ENSXCOG00000012654	larp6a	86	60.093	ENSCAFG00000017616	LARP6	97	60.093	Canis_familiaris
ENSXCOG00000012654	larp6a	96	57.374	ENSCAFG00020007296	LARP6	88	59.417	Canis_lupus_dingo
ENSXCOG00000012654	larp6a	89	60.314	ENSCHIG00000013742	LARP6	87	60.314	Capra_hircus
ENSXCOG00000012654	larp6a	86	58.933	ENSTSYG00000028124	LARP6	86	58.542	Carlito_syrichta
ENSXCOG00000012654	larp6a	85	59.016	ENSCAPG00000015452	LARP6	97	59.016	Cavia_aperea
ENSXCOG00000012654	larp6a	94	56.584	ENSCPOG00000022687	LARP6	87	58.427	Cavia_porcellus
ENSXCOG00000012654	larp6a	89	59.417	ENSCCAG00000036320	LARP6	87	59.417	Cebus_capucinus
ENSXCOG00000012654	larp6a	89	59.193	ENSCATG00000042432	LARP6	87	59.193	Cercocebus_atys
ENSXCOG00000012654	larp6a	91	58.425	ENSCLAG00000007893	LARP6	95	56.879	Chinchilla_lanigera
ENSXCOG00000012654	larp6a	89	59.193	ENSCSAG00000013672	LARP6	87	59.193	Chlorocebus_sabaeus
ENSXCOG00000012654	larp6a	89	58.969	ENSCHOG00000003318	LARP6	90	58.969	Choloepus_hoffmanni
ENSXCOG00000012654	larp6a	96	60.504	ENSCPBG00000010771	LARP6	89	60.504	Chrysemys_picta_bellii
ENSXCOG00000012654	larp6a	86	59.629	ENSCANG00000025833	LARP6	98	59.629	Colobus_angolensis_palliatus
ENSXCOG00000012654	larp6a	89	59.641	ENSCGRG00001024472	Larp6	87	59.641	Cricetulus_griseus_chok1gshd
ENSXCOG00000012654	larp6a	89	59.641	ENSCGRG00000004527	Larp6	87	59.641	Cricetulus_griseus_crigri
ENSXCOG00000012654	larp6a	98	90.966	ENSCSEG00000011196	larp6a	72	90.966	Cynoglossus_semilaevis
ENSXCOG00000012654	larp6a	98	97.479	ENSCVAG00000009605	larp6a	71	97.479	Cyprinodon_variegatus
ENSXCOG00000012654	larp6a	99	80.000	ENSDARG00000005355	larp6a	99	83.141	Danio_rerio
ENSXCOG00000012654	larp6a	89	58.691	ENSDNOG00000042993	LARP6	87	58.691	Dasypus_novemcinctus
ENSXCOG00000012654	larp6a	94	55.165	ENSDORG00000023910	Larp6	88	58.889	Dipodomys_ordii
ENSXCOG00000012654	larp6a	67	62.150	ENSETEG00000020390	LARP6	66	62.150	Echinops_telfairi
ENSXCOG00000012654	larp6a	89	59.865	ENSEASG00005005490	LARP6	64	59.865	Equus_asinus_asinus
ENSXCOG00000012654	larp6a	89	60.090	ENSECAG00000014190	LARP6	96	59.152	Equus_caballus
ENSXCOG00000012654	larp6a	98	84.426	ENSELUG00000007341	larp6a	72	84.221	Esox_lucius
ENSXCOG00000012654	larp6a	89	58.520	ENSFCAG00000001361	LARP6	87	58.969	Felis_catus
ENSXCOG00000012654	larp6a	94	58.650	ENSFALG00000012389	LARP6	97	58.650	Ficedula_albicollis
ENSXCOG00000012654	larp6a	88	58.691	ENSFDAG00000019994	LARP6	84	58.691	Fukomys_damarensis
ENSXCOG00000012654	larp6a	98	96.849	ENSFHEG00000010312	larp6a	70	96.849	Fundulus_heteroclitus
ENSXCOG00000012654	larp6a	89	60.271	ENSGALG00000004046	LARP6	87	60.271	Gallus_gallus
ENSXCOG00000012654	larp6a	98	98.529	ENSGAFG00000009426	larp6a	70	98.283	Gambusia_affinis
ENSXCOG00000012654	larp6a	88	89.070	ENSGACG00000014622	larp6a	99	89.070	Gasterosteus_aculeatus
ENSXCOG00000012654	larp6a	89	58.691	ENSGAGG00000010802	LARP6	63	58.465	Gopherus_agassizii
ENSXCOG00000012654	larp6a	86	59.629	ENSGGOG00000024151	LARP6	98	59.629	Gorilla_gorilla
ENSXCOG00000012654	larp6a	98	92.437	ENSHBUG00000021014	larp6a	67	92.437	Haplochromis_burtoni
ENSXCOG00000012654	larp6a	89	60.314	ENSHGLG00000015112	LARP6	95	58.111	Heterocephalus_glaber_female
ENSXCOG00000012654	larp6a	86	60.557	ENSHGLG00100013159	LARP6	98	60.557	Heterocephalus_glaber_male
ENSXCOG00000012654	larp6a	98	86.875	ENSHCOG00000001241	larp6a	92	86.875	Hippocampus_comes
ENSXCOG00000012654	larp6a	98	77.710	ENSIPUG00000010187	larp6	73	78.323	Ictalurus_punctatus
ENSXCOG00000012654	larp6a	87	35.880	ENSIPUG00000002828	-	97	39.401	Ictalurus_punctatus
ENSXCOG00000012654	larp6a	89	58.969	ENSSTOG00000024279	LARP6	93	58.969	Ictidomys_tridecemlineatus
ENSXCOG00000012654	larp6a	89	58.744	ENSJJAG00000011013	Larp6	98	56.162	Jaculus_jaculus
ENSXCOG00000012654	larp6a	98	94.142	ENSKMAG00000001702	larp6a	66	94.142	Kryptolebias_marmoratus
ENSXCOG00000012654	larp6a	98	89.496	ENSLBEG00000000170	larp6a	93	89.496	Labrus_bergylta
ENSXCOG00000012654	larp6a	84	45.131	ENSLACG00000002786	-	95	46.209	Latimeria_chalumnae
ENSXCOG00000012654	larp6a	95	62.971	ENSLACG00000018706	LARP6	91	62.705	Latimeria_chalumnae
ENSXCOG00000012654	larp6a	84	44.496	ENSLOCG00000008547	-	80	46.099	Lepisosteus_oculatus
ENSXCOG00000012654	larp6a	98	75.941	ENSLOCG00000014592	larp6a	72	75.941	Lepisosteus_oculatus
ENSXCOG00000012654	larp6a	89	59.641	ENSLAFG00000016343	LARP6	96	59.641	Loxodonta_africana
ENSXCOG00000012654	larp6a	89	59.193	ENSMFAG00000035507	LARP6	96	59.193	Macaca_fascicularis
ENSXCOG00000012654	larp6a	89	59.193	ENSMMUG00000004429	LARP6	90	59.193	Macaca_mulatta
ENSXCOG00000012654	larp6a	89	59.193	ENSMNEG00000045335	LARP6	87	59.193	Macaca_nemestrina
ENSXCOG00000012654	larp6a	86	59.629	ENSMLEG00000038587	LARP6	98	59.629	Mandrillus_leucophaeus
ENSXCOG00000012654	larp6a	98	91.807	ENSMAMG00000005261	larp6a	69	91.807	Mastacembelus_armatus
ENSXCOG00000012654	larp6a	98	92.647	ENSMZEG00005005774	larp6a	67	92.647	Maylandia_zebra
ENSXCOG00000012654	larp6a	85	60.094	ENSMGAG00000005077	LARP6	98	61.502	Meleagris_gallopavo
ENSXCOG00000012654	larp6a	89	58.969	ENSMAUG00000018486	Larp6	87	59.417	Mesocricetus_auratus
ENSXCOG00000012654	larp6a	89	58.296	ENSMICG00000011234	LARP6	96	56.173	Microcebus_murinus
ENSXCOG00000012654	larp6a	89	59.641	ENSMOCG00000010492	Larp6	87	59.641	Microtus_ochrogaster
ENSXCOG00000012654	larp6a	98	90.336	ENSMMOG00000016284	larp6a	94	90.336	Mola_mola
ENSXCOG00000012654	larp6a	89	56.854	ENSMODG00000009034	LARP6	83	56.854	Monodelphis_domestica
ENSXCOG00000012654	larp6a	96	90.792	ENSMALG00000014439	larp6a	91	90.792	Monopterus_albus
ENSXCOG00000012654	larp6a	89	59.417	MGP_CAROLIEiJ_G0032314	Larp6	87	59.417	Mus_caroli
ENSXCOG00000012654	larp6a	89	59.193	ENSMUSG00000034839	Larp6	87	59.193	Mus_musculus
ENSXCOG00000012654	larp6a	89	59.193	MGP_PahariEiJ_G0015180	Larp6	87	59.193	Mus_pahari
ENSXCOG00000012654	larp6a	89	59.417	MGP_SPRETEiJ_G0033452	Larp6	87	59.417	Mus_spretus
ENSXCOG00000012654	larp6a	86	59.908	ENSMPUG00000017086	LARP6	97	59.722	Mustela_putorius_furo
ENSXCOG00000012654	larp6a	89	59.101	ENSMLUG00000010319	LARP6	95	57.231	Myotis_lucifugus
ENSXCOG00000012654	larp6a	89	59.865	ENSNGAG00000014238	Larp6	87	59.865	Nannospalax_galili
ENSXCOG00000012654	larp6a	98	92.857	ENSNBRG00000008120	larp6a	93	92.857	Neolamprologus_brichardi
ENSXCOG00000012654	larp6a	89	59.193	ENSNLEG00000013691	LARP6	88	59.193	Nomascus_leucogenys
ENSXCOG00000012654	larp6a	74	65.385	ENSMEUG00000002270	LARP6	75	67.213	Notamacropus_eugenii
ENSXCOG00000012654	larp6a	72	55.163	ENSOPRG00000004868	-	99	55.890	Ochotona_princeps
ENSXCOG00000012654	larp6a	94	57.380	ENSODEG00000015958	LARP6	95	57.203	Octodon_degus
ENSXCOG00000012654	larp6a	98	92.469	ENSONIG00000002901	larp6a	93	92.469	Oreochromis_niloticus
ENSXCOG00000012654	larp6a	83	59.024	ENSOCUG00000009306	LARP6	97	59.338	Oryctolagus_cuniculus
ENSXCOG00000012654	larp6a	95	91.398	ENSORLG00000014256	larp6a	93	91.398	Oryzias_latipes
ENSXCOG00000012654	larp6a	98	91.176	ENSORLG00020019657	larp6a	70	91.176	Oryzias_latipes_hni
ENSXCOG00000012654	larp6a	98	91.597	ENSORLG00015017915	larp6a	70	91.597	Oryzias_latipes_hsok
ENSXCOG00000012654	larp6a	98	92.017	ENSOMEG00000017049	larp6a	70	92.017	Oryzias_melastigma
ENSXCOG00000012654	larp6a	89	58.145	ENSOGAG00000000522	LARP6	87	59.009	Otolemur_garnettii
ENSXCOG00000012654	larp6a	86	60.648	ENSOARG00000018750	LARP6	97	60.648	Ovis_aries
ENSXCOG00000012654	larp6a	86	59.629	ENSPPAG00000031247	LARP6	98	59.629	Pan_paniscus
ENSXCOG00000012654	larp6a	89	58.296	ENSPPRG00000011282	LARP6	87	58.744	Panthera_pardus
ENSXCOG00000012654	larp6a	86	59.397	ENSPTIG00000015318	LARP6	85	59.397	Panthera_tigris_altaica
ENSXCOG00000012654	larp6a	89	59.193	ENSPTRG00000007234	LARP6	87	59.193	Pan_troglodytes
ENSXCOG00000012654	larp6a	89	59.193	ENSPANG00000016362	LARP6	87	59.193	Papio_anubis
ENSXCOG00000012654	larp6a	98	76.398	ENSPKIG00000004511	LARP6	72	76.398	Paramormyrops_kingsleyae
ENSXCOG00000012654	larp6a	98	73.428	ENSPKIG00000020103	larp6a	89	75.427	Paramormyrops_kingsleyae
ENSXCOG00000012654	larp6a	57	71.154	ENSPSIG00000009071	LARP6	89	65.789	Pelodiscus_sinensis
ENSXCOG00000012654	larp6a	98	91.597	ENSPMGG00000006958	larp6a	95	91.597	Periophthalmus_magnuspinnatus
ENSXCOG00000012654	larp6a	94	56.790	ENSPEMG00000012909	Larp6	87	58.969	Peromyscus_maniculatus_bairdii
ENSXCOG00000012654	larp6a	89	57.143	ENSPCIG00000020765	LARP6	83	57.143	Phascolarctos_cinereus
ENSXCOG00000012654	larp6a	98	97.297	ENSPFOG00000014175	larp6a	93	97.297	Poecilia_formosa
ENSXCOG00000012654	larp6a	98	98.109	ENSPLAG00000011105	larp6a	69	98.109	Poecilia_latipinna
ENSXCOG00000012654	larp6a	98	98.109	ENSPMEG00000011085	larp6a	69	98.109	Poecilia_mexicana
ENSXCOG00000012654	larp6a	98	97.484	ENSPREG00000008067	larp6a	69	97.484	Poecilia_reticulata
ENSXCOG00000012654	larp6a	89	59.193	ENSPPYG00000006604	LARP6	87	59.193	Pongo_abelii
ENSXCOG00000012654	larp6a	64	64.118	ENSPCAG00000014197	LARP6	74	64.118	Procavia_capensis
ENSXCOG00000012654	larp6a	89	58.296	ENSPCOG00000022934	LARP6	87	58.296	Propithecus_coquereli
ENSXCOG00000012654	larp6a	89	60.090	ENSPVAG00000005618	LARP6	95	57.938	Pteropus_vampyrus
ENSXCOG00000012654	larp6a	98	92.437	ENSPNYG00000009835	larp6a	93	92.437	Pundamilia_nyererei
ENSXCOG00000012654	larp6a	100	77.734	ENSPNAG00000017966	larp6a	81	78.131	Pygocentrus_nattereri
ENSXCOG00000012654	larp6a	89	59.821	ENSRNOG00000012438	Larp6	87	59.641	Rattus_norvegicus
ENSXCOG00000012654	larp6a	93	57.839	ENSRBIG00000032902	LARP6	88	58.837	Rhinopithecus_bieti
ENSXCOG00000012654	larp6a	89	59.193	ENSRROG00000043074	LARP6	87	59.193	Rhinopithecus_roxellana
ENSXCOG00000012654	larp6a	86	59.861	ENSSBOG00000024190	LARP6	98	59.861	Saimiri_boliviensis_boliviensis
ENSXCOG00000012654	larp6a	87	54.920	ENSSHAG00000018495	LARP6	99	56.064	Sarcophilus_harrisii
ENSXCOG00000012654	larp6a	89	77.136	ENSSFOG00015023268	larp6a	92	73.629	Scleropages_formosus
ENSXCOG00000012654	larp6a	97	72.537	ENSSFOG00015002254	LARP6	92	72.651	Scleropages_formosus
ENSXCOG00000012654	larp6a	98	89.706	ENSSMAG00000009953	larp6a	69	89.706	Scophthalmus_maximus
ENSXCOG00000012654	larp6a	98	92.017	ENSSDUG00000007438	larp6a	69	92.017	Seriola_dumerili
ENSXCOG00000012654	larp6a	98	92.017	ENSSLDG00000016647	larp6a	69	92.017	Seriola_lalandi_dorsalis
ENSXCOG00000012654	larp6a	86	61.882	ENSSPUG00000011312	LARP6	98	61.882	Sphenodon_punctatus
ENSXCOG00000012654	larp6a	98	92.647	ENSSPAG00000020502	larp6a	69	92.647	Stegastes_partitus
ENSXCOG00000012654	larp6a	89	60.090	ENSSSCG00000004974	LARP6	87	60.090	Sus_scrofa
ENSXCOG00000012654	larp6a	85	59.813	ENSTGUG00000005808	LARP6	98	59.813	Taeniopygia_guttata
ENSXCOG00000012654	larp6a	98	87.238	ENSTRUG00000003151	larp6a	71	87.238	Takifugu_rubripes
ENSXCOG00000012654	larp6a	99	82.536	ENSTNIG00000011926	larp6a	99	82.536	Tetraodon_nigroviridis
ENSXCOG00000012654	larp6a	85	58.837	ENSTBEG00000015077	LARP6	98	58.837	Tupaia_belangeri
ENSXCOG00000012654	larp6a	86	60.277	ENSUAMG00000010467	LARP6	84	60.277	Ursus_americanus
ENSXCOG00000012654	larp6a	86	60.046	ENSVVUG00000015227	LARP6	93	59.861	Vulpes_vulpes
ENSXCOG00000012654	larp6a	96	62.292	ENSXETG00000020340	larp6	94	62.292	Xenopus_tropicalis
ENSXCOG00000012654	larp6a	98	99.790	ENSXMAG00000021015	larp6a	66	99.790	Xiphophorus_maculatus