EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000012756 (Gene tree)
Gene ID: -
Gene Symbol: im:7138535
Alias: -
Full Name: im:7138535
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2776 bases
Position: chrKQ557210.1:13252863-13255638
Accession: ZDB-GENE-041111-49
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000016914	DUF2465	PF10239.9	2.1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000017133	-	1041	-	ENSXCOP00000016914	346 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012756's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000012756	im:7138535	87	31.173	ENSXCOG00000000576	fam98b	76	31.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012756	im:7138535	78	30.104	ENSG00000171262	FAM98B	63	31.353	Homo_sapiens
ENSXCOG00000012756	im:7138535	71	33.591	ENSG00000130244	FAM98C	64	33.466	Homo_sapiens
ENSXCOG00000012756	im:7138535	98	63.014	ENSAPOG00000014173	-	91	63.372	Acanthochromis_polyacanthus
ENSXCOG00000012756	im:7138535	92	32.849	ENSAPOG00000011449	fam98b	81	32.544	Acanthochromis_polyacanthus
ENSXCOG00000012756	im:7138535	76	35.379	ENSAMEG00000010326	FAM98C	63	34.263	Ailuropoda_melanoleuca
ENSXCOG00000012756	im:7138535	100	71.264	ENSACIG00000002526	im:7138535	93	71.739	Amphilophus_citrinellus
ENSXCOG00000012756	im:7138535	83	33.663	ENSACIG00000015069	fam98b	80	32.938	Amphilophus_citrinellus
ENSXCOG00000012756	im:7138535	98	68.328	ENSAOCG00000002680	-	91	69.062	Amphiprion_ocellaris
ENSXCOG00000012756	im:7138535	92	31.977	ENSAOCG00000018313	fam98b	81	32.059	Amphiprion_ocellaris
ENSXCOG00000012756	im:7138535	92	31.686	ENSAPEG00000016398	fam98b	81	31.765	Amphiprion_percula
ENSXCOG00000012756	im:7138535	98	68.328	ENSAPEG00000013731	-	91	69.062	Amphiprion_percula
ENSXCOG00000012756	im:7138535	83	35.484	ENSATEG00000011057	fam98b	72	36.601	Anabas_testudineus
ENSXCOG00000012756	im:7138535	97	64.412	ENSATEG00000010695	-	100	62.500	Anabas_testudineus
ENSXCOG00000012756	im:7138535	79	31.864	ENSACAG00000015917	FAM98B	67	33.333	Anolis_carolinensis
ENSXCOG00000012756	im:7138535	83	34.967	ENSACAG00000002418	FAM98C	80	34.768	Anolis_carolinensis
ENSXCOG00000012756	im:7138535	54	36.634	ENSANAG00000035244	FAM98C	64	32.016	Aotus_nancymaae
ENSXCOG00000012756	im:7138535	83	34.098	ENSACLG00000013626	fam98b	70	34.551	Astatotilapia_calliptera
ENSXCOG00000012756	im:7138535	94	68.923	ENSACLG00000020293	-	93	69.452	Astatotilapia_calliptera
ENSXCOG00000012756	im:7138535	82	64.561	ENSACLG00000018753	-	81	66.160	Astatotilapia_calliptera
ENSXCOG00000012756	im:7138535	67	35.484	ENSAMXG00000014694	fam98b	52	35.656	Astyanax_mexicanus
ENSXCOG00000012756	im:7138535	100	50.144	ENSAMXG00000042035	im:7138535	91	52.812	Astyanax_mexicanus
ENSXCOG00000012756	im:7138535	55	38.235	ENSBTAG00000039593	FAM98C	60	32.016	Bos_taurus
ENSXCOG00000012756	im:7138535	52	37.436	ENSCJAG00000013626	FAM98C	64	32.016	Callithrix_jacchus
ENSXCOG00000012756	im:7138535	76	35.252	ENSCAFG00000005919	FAM98C	56	34.252	Canis_familiaris
ENSXCOG00000012756	im:7138535	77	35.357	ENSCAFG00020017778	FAM98C	81	42.241	Canis_lupus_dingo
ENSXCOG00000012756	im:7138535	55	38.235	ENSCHIG00000019659	FAM98C	64	32.806	Capra_hircus
ENSXCOG00000012756	im:7138535	74	33.704	ENSCCAG00000032150	FAM98C	64	33.202	Cebus_capucinus
ENSXCOG00000012756	im:7138535	50	37.766	ENSCATG00000023670	FAM98C	64	33.466	Cercocebus_atys
ENSXCOG00000012756	im:7138535	58	30.198	ENSCATG00000032790	-	65	30.198	Cercocebus_atys
ENSXCOG00000012756	im:7138535	50	37.634	ENSCSAG00000004058	FAM98C	89	37.640	Chlorocebus_sabaeus
ENSXCOG00000012756	im:7138535	50	37.634	ENSCANG00000026868	FAM98C	90	37.640	Colobus_angolensis_palliatus
ENSXCOG00000012756	im:7138535	73	34.962	ENSCGRG00001013657	Fam98c	66	34.387	Cricetulus_griseus_chok1gshd
ENSXCOG00000012756	im:7138535	100	61.864	ENSCSEG00000009775	im:7138535	100	60.340	Cynoglossus_semilaevis
ENSXCOG00000012756	im:7138535	83	33.987	ENSCSEG00000004831	fam98b	67	33.775	Cynoglossus_semilaevis
ENSXCOG00000012756	im:7138535	79	32.292	ENSCVAG00000003248	fam98b	72	33.775	Cyprinodon_variegatus
ENSXCOG00000012756	im:7138535	71	75.610	ENSCVAG00000007841	-	68	75.610	Cyprinodon_variegatus
ENSXCOG00000012756	im:7138535	67	36.214	ENSDARG00000060068	fam98b	76	31.683	Danio_rerio
ENSXCOG00000012756	im:7138535	100	46.857	ENSDARG00000057245	im:7138535	91	48.125	Danio_rerio
ENSXCOG00000012756	im:7138535	83	32.566	ENSELUG00000006690	fam98b	72	33.333	Esox_lucius
ENSXCOG00000012756	im:7138535	100	54.416	ENSELUG00000019550	im:7138535	91	56.347	Esox_lucius
ENSXCOG00000012756	im:7138535	76	33.574	ENSFCAG00000000826	FAM98C	63	32.669	Felis_catus
ENSXCOG00000012756	im:7138535	92	32.277	ENSFHEG00000020445	fam98b	81	31.778	Fundulus_heteroclitus
ENSXCOG00000012756	im:7138535	92	80.251	ENSFHEG00000005365	-	91	80.374	Fundulus_heteroclitus
ENSXCOG00000012756	im:7138535	88	52.288	ENSGMOG00000011664	-	90	52.288	Gadus_morhua
ENSXCOG00000012756	im:7138535	92	32.849	ENSGAFG00000019645	fam98b	82	33.529	Gambusia_affinis
ENSXCOG00000012756	im:7138535	99	93.623	ENSGAFG00000010684	-	99	93.623	Gambusia_affinis
ENSXCOG00000012756	im:7138535	100	62.254	ENSGACG00000008979	-	91	63.975	Gasterosteus_aculeatus
ENSXCOG00000012756	im:7138535	89	35.435	ENSGAGG00000016487	FAM98C	83	35.082	Gopherus_agassizii
ENSXCOG00000012756	im:7138535	71	33.591	ENSGGOG00000004470	FAM98C	64	33.466	Gorilla_gorilla
ENSXCOG00000012756	im:7138535	83	34.426	ENSHBUG00000017779	fam98b	70	34.884	Haplochromis_burtoni
ENSXCOG00000012756	im:7138535	64	65.766	ENSHBUG00000018179	-	92	65.766	Haplochromis_burtoni
ENSXCOG00000012756	im:7138535	71	65.587	ENSHBUG00000016825	-	82	63.889	Haplochromis_burtoni
ENSXCOG00000012756	im:7138535	100	60.519	ENSHCOG00000017023	im:7138535	93	62.305	Hippocampus_comes
ENSXCOG00000012756	im:7138535	75	34.074	ENSIPUG00000006869	fam98b	61	34.082	Ictalurus_punctatus
ENSXCOG00000012756	im:7138535	100	48.415	ENSIPUG00000024006	im:7138535	91	50.470	Ictalurus_punctatus
ENSXCOG00000012756	im:7138535	76	33.813	ENSSTOG00000022450	FAM98C	63	33.865	Ictidomys_tridecemlineatus
ENSXCOG00000012756	im:7138535	99	69.540	ENSKMAG00000015503	im:7138535	91	71.250	Kryptolebias_marmoratus
ENSXCOG00000012756	im:7138535	83	31.046	ENSKMAG00000011017	fam98b	73	31.126	Kryptolebias_marmoratus
ENSXCOG00000012756	im:7138535	83	32.459	ENSLBEG00000028307	fam98b	72	33.333	Labrus_bergylta
ENSXCOG00000012756	im:7138535	92	65.312	ENSLBEG00000026478	im:7138535	97	63.006	Labrus_bergylta
ENSXCOG00000012756	im:7138535	83	30.795	ENSLACG00000010997	FAM98B	72	30.872	Latimeria_chalumnae
ENSXCOG00000012756	im:7138535	86	30.247	ENSLOCG00000012257	fam98b	81	30.247	Lepisosteus_oculatus
ENSXCOG00000012756	im:7138535	55	41.546	ENSLAFG00000020798	FAM98C	72	40.884	Loxodonta_africana
ENSXCOG00000012756	im:7138535	78	30.104	ENSMFAG00000016144	FAM98B	67	31.353	Macaca_fascicularis
ENSXCOG00000012756	im:7138535	50	37.634	ENSMMUG00000020468	FAM98C	89	37.640	Macaca_mulatta
ENSXCOG00000012756	im:7138535	50	37.766	ENSMNEG00000041959	FAM98C	64	33.466	Macaca_nemestrina
ENSXCOG00000012756	im:7138535	50	37.634	ENSMLEG00000042221	FAM98C	89	37.640	Mandrillus_leucophaeus
ENSXCOG00000012756	im:7138535	83	33.660	ENSMAMG00000005919	fam98b	73	33.775	Mastacembelus_armatus
ENSXCOG00000012756	im:7138535	100	64.205	ENSMAMG00000009488	im:7138535	100	63.897	Mastacembelus_armatus
ENSXCOG00000012756	im:7138535	94	69.231	ENSMZEG00005015389	-	100	69.741	Maylandia_zebra
ENSXCOG00000012756	im:7138535	87	67.442	ENSMZEG00005015997	-	99	68.111	Maylandia_zebra
ENSXCOG00000012756	im:7138535	83	34.098	ENSMZEG00005002623	fam98b	70	34.551	Maylandia_zebra
ENSXCOG00000012756	im:7138535	79	30.537	ENSMAUG00000021144	Fam98b	65	31.731	Mesocricetus_auratus
ENSXCOG00000012756	im:7138535	76	35.018	ENSMICG00000004244	FAM98C	63	33.865	Microcebus_murinus
ENSXCOG00000012756	im:7138535	77	35.231	ENSMOCG00000018846	Fam98c	66	35.039	Microtus_ochrogaster
ENSXCOG00000012756	im:7138535	74	30.827	ENSMMOG00000009986	fam98b	78	30.827	Mola_mola
ENSXCOG00000012756	im:7138535	100	63.920	ENSMMOG00000012054	im:7138535	91	64.688	Mola_mola
ENSXCOG00000012756	im:7138535	73	30.712	ENSMODG00000013175	-	74	34.270	Monodelphis_domestica
ENSXCOG00000012756	im:7138535	98	65.205	ENSMALG00000005360	-	100	63.818	Monopterus_albus
ENSXCOG00000012756	im:7138535	66	35.983	ENSMALG00000016464	fam98b	59	33.210	Monopterus_albus
ENSXCOG00000012756	im:7138535	79	30.537	MGP_CAROLIEiJ_G0024110	Fam98b	63	31.715	Mus_caroli
ENSXCOG00000012756	im:7138535	76	34.657	MGP_CAROLIEiJ_G0029473	Fam98c	83	42.373	Mus_caroli
ENSXCOG00000012756	im:7138535	76	34.657	ENSMUSG00000030590	Fam98c	83	42.373	Mus_musculus
ENSXCOG00000012756	im:7138535	79	30.508	ENSMUSG00000027349	Fam98b	63	32.039	Mus_musculus
ENSXCOG00000012756	im:7138535	79	30.169	MGP_PahariEiJ_G0025553	Fam98b	63	31.715	Mus_pahari
ENSXCOG00000012756	im:7138535	73	34.962	MGP_PahariEiJ_G0012707	Fam98c	83	42.373	Mus_pahari
ENSXCOG00000012756	im:7138535	79	30.508	MGP_SPRETEiJ_G0025026	Fam98b	69	32.039	Mus_spretus
ENSXCOG00000012756	im:7138535	73	34.586	MGP_SPRETEiJ_G0030569	Fam98c	88	31.076	Mus_spretus
ENSXCOG00000012756	im:7138535	76	35.018	ENSMPUG00000017827	FAM98C	63	33.466	Mustela_putorius_furo
ENSXCOG00000012756	im:7138535	54	38.614	ENSNGAG00000023101	Fam98c	50	37.640	Nannospalax_galili
ENSXCOG00000012756	im:7138535	83	34.983	ENSNBRG00000023631	fam98b	68	35.452	Neolamprologus_brichardi
ENSXCOG00000012756	im:7138535	94	64.615	ENSNBRG00000008282	-	100	65.418	Neolamprologus_brichardi
ENSXCOG00000012756	im:7138535	78	30.104	ENSNLEG00000011389	FAM98B	64	31.353	Nomascus_leucogenys
ENSXCOG00000012756	im:7138535	57	32.870	ENSMEUG00000011451	FAM98C	59	32.990	Notamacropus_eugenii
ENSXCOG00000012756	im:7138535	59	35.398	ENSOPRG00000008937	FAM98C	55	35.176	Ochotona_princeps
ENSXCOG00000012756	im:7138535	98	67.751	ENSONIG00000008152	-	90	68.239	Oreochromis_niloticus
ENSXCOG00000012756	im:7138535	99	68.696	ENSONIG00000006268	-	100	69.164	Oreochromis_niloticus
ENSXCOG00000012756	im:7138535	92	33.819	ENSONIG00000001415	fam98b	77	33.923	Oreochromis_niloticus
ENSXCOG00000012756	im:7138535	80	30.169	ENSOCUG00000001786	FAM98B	67	30.033	Oryctolagus_cuniculus
ENSXCOG00000012756	im:7138535	100	64.756	ENSORLG00000007729	-	100	64.756	Oryzias_latipes
ENSXCOG00000012756	im:7138535	87	31.288	ENSORLG00000012990	fam98b	86	32.353	Oryzias_latipes
ENSXCOG00000012756	im:7138535	100	65.330	ENSORLG00020021618	-	100	65.230	Oryzias_latipes_hni
ENSXCOG00000012756	im:7138535	87	31.288	ENSORLG00020017980	fam98b	86	32.353	Oryzias_latipes_hni
ENSXCOG00000012756	im:7138535	100	65.616	ENSORLG00015002830	-	100	65.616	Oryzias_latipes_hsok
ENSXCOG00000012756	im:7138535	98	67.941	ENSOMEG00000016172	im:7138535	100	67.529	Oryzias_melastigma
ENSXCOG00000012756	im:7138535	81	32.333	ENSOGAG00000025904	FAM98C	72	32.014	Otolemur_garnettii
ENSXCOG00000012756	im:7138535	71	33.591	ENSPPAG00000043372	FAM98C	64	33.466	Pan_paniscus
ENSXCOG00000012756	im:7138535	76	33.213	ENSPPRG00000010257	FAM98C	63	31.873	Panthera_pardus
ENSXCOG00000012756	im:7138535	78	30.104	ENSPTRG00000006904	FAM98B	69	31.353	Pan_troglodytes
ENSXCOG00000012756	im:7138535	71	33.591	ENSPTRG00000049914	-	64	33.466	Pan_troglodytes
ENSXCOG00000012756	im:7138535	71	33.591	ENSPTRG00000010929	FAM98C	64	33.466	Pan_troglodytes
ENSXCOG00000012756	im:7138535	78	30.104	ENSPANG00000019500	FAM98B	63	31.353	Papio_anubis
ENSXCOG00000012756	im:7138535	50	37.766	ENSPANG00000007584	FAM98C	64	33.466	Papio_anubis
ENSXCOG00000012756	im:7138535	92	49.235	ENSPKIG00000017343	im:7138535	93	49.235	Paramormyrops_kingsleyae
ENSXCOG00000012756	im:7138535	85	31.111	ENSPKIG00000022087	FAM98B	82	31.034	Paramormyrops_kingsleyae
ENSXCOG00000012756	im:7138535	93	48.457	ENSPMGG00000021240	-	91	48.750	Periophthalmus_magnuspinnatus
ENSXCOG00000012756	im:7138535	78	30.137	ENSPEMG00000013365	Fam98b	63	31.715	Peromyscus_maniculatus_bairdii
ENSXCOG00000012756	im:7138535	83	32.353	ENSPFOG00000014774	fam98b	76	33.019	Poecilia_formosa
ENSXCOG00000012756	im:7138535	100	90.805	ENSPFOG00000015605	im:7138535	98	90.805	Poecilia_formosa
ENSXCOG00000012756	im:7138535	83	32.353	ENSPLAG00000020372	fam98b	76	33.019	Poecilia_latipinna
ENSXCOG00000012756	im:7138535	100	90.230	ENSPLAG00000001683	im:7138535	100	90.230	Poecilia_latipinna
ENSXCOG00000012756	im:7138535	92	31.686	ENSPMEG00000010960	fam98b	81	32.353	Poecilia_mexicana
ENSXCOG00000012756	im:7138535	100	91.908	ENSPMEG00000014084	im:7138535	100	91.908	Poecilia_mexicana
ENSXCOG00000012756	im:7138535	92	31.686	ENSPREG00000007461	fam98b	78	32.353	Poecilia_reticulata
ENSXCOG00000012756	im:7138535	100	92.795	ENSPREG00000022142	-	100	92.795	Poecilia_reticulata
ENSXCOG00000012756	im:7138535	78	30.450	ENSPPYG00000006336	FAM98B	63	31.683	Pongo_abelii
ENSXCOG00000012756	im:7138535	50	37.234	ENSPPYG00000009934	FAM98C	55	37.222	Pongo_abelii
ENSXCOG00000012756	im:7138535	76	35.018	ENSPCOG00000024380	FAM98C	65	33.865	Propithecus_coquereli
ENSXCOG00000012756	im:7138535	83	35.314	ENSPNYG00000016866	fam98b	67	35.786	Pundamilia_nyererei
ENSXCOG00000012756	im:7138535	55	63.158	ENSPNYG00000003712	-	79	60.104	Pundamilia_nyererei
ENSXCOG00000012756	im:7138535	83	33.442	ENSPNAG00000008893	fam98b	71	33.993	Pygocentrus_nattereri
ENSXCOG00000012756	im:7138535	98	49.708	ENSPNAG00000019766	im:7138535	90	50.938	Pygocentrus_nattereri
ENSXCOG00000012756	im:7138535	76	35.018	ENSRNOG00000024036	Fam98c	82	33.226	Rattus_norvegicus
ENSXCOG00000012756	im:7138535	50	37.766	ENSRBIG00000036368	-	61	37.778	Rhinopithecus_bieti
ENSXCOG00000012756	im:7138535	71	33.591	ENSRROG00000017020	FAM98C	64	33.466	Rhinopithecus_roxellana
ENSXCOG00000012756	im:7138535	55	38.235	ENSSBOG00000034217	FAM98C	60	37.640	Saimiri_boliviensis_boliviensis
ENSXCOG00000012756	im:7138535	78	30.104	ENSSBOG00000011037	FAM98B	68	30.693	Saimiri_boliviensis_boliviensis
ENSXCOG00000012756	im:7138535	55	34.975	ENSSHAG00000002208	-	75	35.196	Sarcophilus_harrisii
ENSXCOG00000012756	im:7138535	71	38.281	ENSSFOG00015010673	fam98b	75	34.448	Scleropages_formosus
ENSXCOG00000012756	im:7138535	98	48.295	ENSSFOG00015007019	im:7138535	91	49.096	Scleropages_formosus
ENSXCOG00000012756	im:7138535	100	67.614	ENSSMAG00000016618	-	92	68.421	Scophthalmus_maximus
ENSXCOG00000012756	im:7138535	83	32.026	ENSSMAG00000018911	fam98b	74	32.119	Scophthalmus_maximus
ENSXCOG00000012756	im:7138535	99	68.605	ENSSDUG00000020558	im:7138535	100	66.952	Seriola_dumerili
ENSXCOG00000012756	im:7138535	83	32.026	ENSSLDG00000007822	fam98b	72	32.450	Seriola_lalandi_dorsalis
ENSXCOG00000012756	im:7138535	99	68.023	ENSSLDG00000016057	-	100	66.382	Seriola_lalandi_dorsalis
ENSXCOG00000012756	im:7138535	92	33.721	ENSSPAG00000015480	fam98b	80	33.824	Stegastes_partitus
ENSXCOG00000012756	im:7138535	98	67.251	ENSSPAG00000004694	im:7138535	91	68.224	Stegastes_partitus
ENSXCOG00000012756	im:7138535	77	34.409	ENSSSCG00000002959	FAM98C	64	34.387	Sus_scrofa
ENSXCOG00000012756	im:7138535	84	33.119	ENSTRUG00000013778	fam98b	84	31.751	Takifugu_rubripes
ENSXCOG00000012756	im:7138535	97	61.128	ENSTRUG00000015519	im:7138535	91	61.129	Takifugu_rubripes
ENSXCOG00000012756	im:7138535	97	61.310	ENSTNIG00000019278	im:7138535	90	62.382	Tetraodon_nigroviridis
ENSXCOG00000012756	im:7138535	87	32.817	ENSTNIG00000017243	fam98b	77	32.573	Tetraodon_nigroviridis
ENSXCOG00000012756	im:7138535	76	34.657	ENSUAMG00000014001	FAM98C	63	33.466	Ursus_americanus
ENSXCOG00000012756	im:7138535	92	31.304	ENSXMAG00000010344	fam98b	79	31.195	Xiphophorus_maculatus
ENSXCOG00000012756	im:7138535	100	97.977	ENSXMAG00000008723	im:7138535	100	97.977	Xiphophorus_maculatus