EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000012774 (Gene tree)
Gene ID
-
Gene Symbol
zgc:153372
Alias
-
Full Name
zgc:153372
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Minus strand
Length
6838 bases
Position
chrKQ557210.1:13614176-13621013
Accession
ZDB-GENE-060929-680
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000016941Methyltransf_31PF13847.62.8e-2711
ENSXCOP00000016940Methyltransf_31PF13847.63.1e-2711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000017160-1062-ENSXCOP00000016941353 (aa)--
ENSXCOT00000017159-1101-ENSXCOP00000016940366 (aa)--
Gene Model
Click here to download ENSXCOG00000012774's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012774's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000012774zgc:1533729342.857ENSXCOG00000012456as3mt9842.857
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000012774zgc:1533729845.326ENSG00000214435AS3MT9347.937Homo_sapiens
ENSXCOG00000012774zgc:1533729971.671ENSAPOG00000009903zgc:1533729871.469Acanthochromis_polyacanthus
ENSXCOG00000012774zgc:1533729550.448ENSAPOG00000015417as3mt8950.147Acanthochromis_polyacanthus
ENSXCOG00000012774zgc:1533729848.286ENSAMEG00000017864AS3MT9448.424Ailuropoda_melanoleuca
ENSXCOG00000012774zgc:1533729648.378ENSACIG00000006747as3mt9448.105Amphilophus_citrinellus
ENSXCOG00000012774zgc:1533729474.474ENSACIG00000018364zgc:1533729874.474Amphilophus_citrinellus
ENSXCOG00000012774zgc:1533729549.851ENSAOCG00000021795as3mt8849.851Amphiprion_ocellaris
ENSXCOG00000012774zgc:1533729972.521ENSAOCG00000010751zgc:1533729772.521Amphiprion_ocellaris
ENSXCOG00000012774zgc:1533729972.238ENSAPEG00000014375zgc:1533729772.238Amphiprion_percula
ENSXCOG00000012774zgc:1533729550.149ENSAPEG00000020598as3mt8850.150Amphiprion_percula
ENSXCOG00000012774zgc:1533729972.286ENSATEG00000010189zgc:1533729672.493Anabas_testudineus
ENSXCOG00000012774zgc:1533729549.851ENSATEG00000020869as3mt8849.851Anabas_testudineus
ENSXCOG00000012774zgc:1533729145.963ENSACAG00000029427AS3MT8845.872Anolis_carolinensis
ENSXCOG00000012774zgc:1533729845.797ENSANAG00000038067AS3MT9246.064Aotus_nancymaae
ENSXCOG00000012774zgc:1533729976.000ENSACLG00000020820zgc:1533729776.000Astatotilapia_calliptera
ENSXCOG00000012774zgc:1533729648.968ENSACLG00000018658as3mt9048.547Astatotilapia_calliptera
ENSXCOG00000012774zgc:1533729961.494ENSAMXG00000000075zgc:1533729460.969Astyanax_mexicanus
ENSXCOG00000012774zgc:1533729744.868ENSAMXG00000031040as3mt9044.868Astyanax_mexicanus
ENSXCOG00000012774zgc:1533729748.718ENSBTAG00000036127AS3MT9248.718Bos_taurus
ENSXCOG00000012774zgc:1533727838.989ENSCJAG00000018113AS3MT8138.989Callithrix_jacchus
ENSXCOG00000012774zgc:1533729848.305ENSCAFG00020010265AS3MT7448.305Canis_lupus_dingo
ENSXCOG00000012774zgc:1533729250.920ENSCHIG00000013994AS3MT9348.870Capra_hircus
ENSXCOG00000012774zgc:1533729846.307ENSCCAG00000020106AS3MT7446.307Cebus_capucinus
ENSXCOG00000012774zgc:1533728948.254ENSCATG00000037118AS3MT8348.562Cercocebus_atys
ENSXCOG00000012774zgc:1533728548.544ENSCLAG00000001482AS3MT8549.833Chinchilla_lanigera
ENSXCOG00000012774zgc:1533729845.042ENSCSAG00000005391AS3MT9345.042Chlorocebus_sabaeus
ENSXCOG00000012774zgc:1533729549.563ENSCPBG00000024496AS3MT9448.588Chrysemys_picta_bellii
ENSXCOG00000012774zgc:1533728845.283ENSCING00000022553-9645.283Ciona_intestinalis
ENSXCOG00000012774zgc:1533728743.730ENSCING00000015865-9043.730Ciona_intestinalis
ENSXCOG00000012774zgc:1533728849.518ENSCSAVG00000000914-8549.518Ciona_savignyi
ENSXCOG00000012774zgc:1533727844.964ENSCSAVG00000002664-9444.964Ciona_savignyi
ENSXCOG00000012774zgc:1533728947.619ENSCANG00000014854AS3MT9247.619Colobus_angolensis_palliatus
ENSXCOG00000012774zgc:1533728750.974ENSCGRG00001009254As3mt8250.974Cricetulus_griseus_chok1gshd
ENSXCOG00000012774zgc:1533729548.094ENSCGRG00000002333As3mt9248.094Cricetulus_griseus_crigri
ENSXCOG00000012774zgc:1533729548.657ENSCSEG00000010967as3mt8848.378Cynoglossus_semilaevis
ENSXCOG00000012774zgc:1533729983.714ENSCVAG00000009973zgc:1533729783.714Cyprinodon_variegatus
ENSXCOG00000012774zgc:1533728851.768ENSCVAG00000018689as3mt8751.768Cyprinodon_variegatus
ENSXCOG00000012774zgc:1533729962.356ENSDARG00000068967zgc:1533729062.356Danio_rerio
ENSXCOG00000012774zgc:1533729747.384ENSDARG00000027572as3mt9147.384Danio_rerio
ENSXCOG00000012774zgc:1533729846.132ENSDORG00000010407As3mt9346.264Dipodomys_ordii
ENSXCOG00000012774zgc:1533729843.059ENSETEG00000007706AS3MT9343.305Echinops_telfairi
ENSXCOG00000012774zgc:1533728949.206ENSEASG00005015193AS3MT8949.521Equus_asinus_asinus
ENSXCOG00000012774zgc:1533729846.459ENSECAG00000018722AS3MT7946.459Equus_caballus
ENSXCOG00000012774zgc:1533727753.988ENSEEUG00000005414AS3MT9435.989Erinaceus_europaeus
ENSXCOG00000012774zgc:1533729548.955ENSELUG00000004368as3mt8748.955Esox_lucius
ENSXCOG00000012774zgc:1533729848.138ENSFCAG00000030999AS3MT9348.138Felis_catus
ENSXCOG00000012774zgc:1533729946.348ENSFALG00000008732AS3MT9546.518Ficedula_albicollis
ENSXCOG00000012774zgc:1533729985.143ENSFHEG00000021094zgc:1533729785.143Fundulus_heteroclitus
ENSXCOG00000012774zgc:1533729651.895ENSFHEG00000023153as3mt8951.906Fundulus_heteroclitus
ENSXCOG00000012774zgc:1533729548.824ENSGALG00000008133AS3MT6847.207Gallus_gallus
ENSXCOG00000012774zgc:1533729594.311ENSGAFG00000010358zgc:15337210094.311Gambusia_affinis
ENSXCOG00000012774zgc:1533729948.424ENSGAFG00000012739as3mt9348.424Gambusia_affinis
ENSXCOG00000012774zgc:1533729976.286ENSGACG00000008485zgc:1533729776.286Gasterosteus_aculeatus
ENSXCOG00000012774zgc:1533728853.722ENSGACG00000018262as3mt9353.016Gasterosteus_aculeatus
ENSXCOG00000012774zgc:1533728851.603ENSGAGG00000007827AS3MT9251.875Gopherus_agassizii
ENSXCOG00000012774zgc:1533729976.286ENSHBUG00000000824zgc:1533729776.286Haplochromis_burtoni
ENSXCOG00000012774zgc:1533729648.968ENSHBUG00000020119as3mt9048.547Haplochromis_burtoni
ENSXCOG00000012774zgc:1533729547.761ENSHCOG00000015739as3mt8947.761Hippocampus_comes
ENSXCOG00000012774zgc:1533729548.657ENSHCOG00000015743as3mt8948.657Hippocampus_comes
ENSXCOG00000012774zgc:1533729963.793ENSIPUG00000014484zgc:1533729763.068Ictalurus_punctatus
ENSXCOG00000012774zgc:1533729745.640ENSIPUG00000022683as3mt9045.640Ictalurus_punctatus
ENSXCOG00000012774zgc:1533728348.973ENSSTOG00000014490AS3MT8448.973Ictidomys_tridecemlineatus
ENSXCOG00000012774zgc:1533728838.585ENSJJAG00000017269As3mt8238.924Jaculus_jaculus
ENSXCOG00000012774zgc:1533729647.941ENSKMAG00000021033as3mt8947.941Kryptolebias_marmoratus
ENSXCOG00000012774zgc:1533729975.143ENSKMAG00000016069zgc:1533729874.499Kryptolebias_marmoratus
ENSXCOG00000012774zgc:1533729971.795ENSLBEG00000026885zgc:1533729771.795Labrus_bergylta
ENSXCOG00000012774zgc:1533729949.858ENSLBEG00000009674as3mt9548.760Labrus_bergylta
ENSXCOG00000012774zgc:1533729348.328ENSLACG00000005976-8048.328Latimeria_chalumnae
ENSXCOG00000012774zgc:1533726447.788ENSLACG00000004754-8347.788Latimeria_chalumnae
ENSXCOG00000012774zgc:1533729962.356ENSLOCG00000000881zgc:1533729562.356Lepisosteus_oculatus
ENSXCOG00000012774zgc:1533728849.196ENSLOCG00000011748as3mt8149.196Lepisosteus_oculatus
ENSXCOG00000012774zgc:1533728949.682ENSLAFG00000012045AS3MT9550.000Loxodonta_africana
ENSXCOG00000012774zgc:1533728947.937ENSMFAG00000039839AS3MT8447.937Macaca_fascicularis
ENSXCOG00000012774zgc:1533728947.937ENSMMUG00000007662AS3MT9247.937Macaca_mulatta
ENSXCOG00000012774zgc:1533729941.714ENSMNEG00000036598AS3MT9241.954Macaca_nemestrina
ENSXCOG00000012774zgc:1533728947.937ENSMLEG00000029524AS3MT8448.243Mandrillus_leucophaeus
ENSXCOG00000012774zgc:1533729774.927ENSMAMG00000009031zgc:1533729274.854Mastacembelus_armatus
ENSXCOG00000012774zgc:1533729547.761ENSMAMG00000009749as3mt8150.485Mastacembelus_armatus
ENSXCOG00000012774zgc:1533729967.614ENSMZEG00005015114zgc:1533729767.806Maylandia_zebra
ENSXCOG00000012774zgc:1533729648.673ENSMZEG00005008714as3mt9048.256Maylandia_zebra
ENSXCOG00000012774zgc:1533729349.085ENSMGAG00000010402AS3MT8948.802Meleagris_gallopavo
ENSXCOG00000012774zgc:1533726749.580ENSMICG00000012292AS3MT9339.444Microcebus_murinus
ENSXCOG00000012774zgc:1533728748.701ENSMOCG00000008340As3mt8248.701Microtus_ochrogaster
ENSXCOG00000012774zgc:1533728851.133ENSMMOG00000007595as3mt9250.962Mola_mola
ENSXCOG00000012774zgc:1533729973.926ENSMMOG00000011899zgc:1533729673.239Mola_mola
ENSXCOG00000012774zgc:1533729548.955ENSMALG00000004271as3mt8948.955Monopterus_albus
ENSXCOG00000012774zgc:1533729547.353MGP_CAROLIEiJ_G0023044As3mt9047.493Mus_caroli
ENSXCOG00000012774zgc:1533729249.846ENSMUSG00000003559As3mt8550.000Mus_musculus
ENSXCOG00000012774zgc:1533729547.384MGP_PahariEiJ_G0014534As3mt9047.522Mus_pahari
ENSXCOG00000012774zgc:1533729547.647MGP_SPRETEiJ_G0023965As3mt9047.788Mus_spretus
ENSXCOG00000012774zgc:1533729846.629ENSMPUG00000016851AS3MT9446.893Mustela_putorius_furo
ENSXCOG00000012774zgc:1533729547.801ENSNGAG00000021235As3mt9048.083Nannospalax_galili
ENSXCOG00000012774zgc:1533729648.673ENSNBRG00000021942as3mt9048.256Neolamprologus_brichardi
ENSXCOG00000012774zgc:1533729963.739ENSNBRG00000013084zgc:1533729763.920Neolamprologus_brichardi
ENSXCOG00000012774zgc:1533728645.695ENSNLEG00000015217AS3MT9545.695Nomascus_leucogenys
ENSXCOG00000012774zgc:1533725453.125ENSOPRG00000001793-9253.403Ochotona_princeps
ENSXCOG00000012774zgc:1533729744.957ENSODEG00000008429AS3MT9644.957Octodon_degus
ENSXCOG00000012774zgc:1533729548.955ENSONIG00000018826as3mt8948.529Oreochromis_niloticus
ENSXCOG00000012774zgc:1533729977.143ENSONIG00000008149zgc:1533729777.143Oreochromis_niloticus
ENSXCOG00000012774zgc:1533728347.883ENSOANG00000001644AS3MT9147.883Ornithorhynchus_anatinus
ENSXCOG00000012774zgc:1533729148.758ENSOCUG00000000626AS3MT8748.632Oryctolagus_cuniculus
ENSXCOG00000012774zgc:1533728852.244ENSORLG00000012900as3mt8152.244Oryzias_latipes
ENSXCOG00000012774zgc:1533729975.214ENSORLG00000008013zgc:1533729775.214Oryzias_latipes
ENSXCOG00000012774zgc:1533728852.564ENSORLG00020003849as3mt8852.564Oryzias_latipes_hni
ENSXCOG00000012774zgc:1533729975.783ENSORLG00020021126zgc:1533729775.783Oryzias_latipes_hni
ENSXCOG00000012774zgc:1533729976.638ENSORLG00015002370zgc:1533729776.638Oryzias_latipes_hsok
ENSXCOG00000012774zgc:1533728851.282ENSORLG00015001796as3mt8151.282Oryzias_latipes_hsok
ENSXCOG00000012774zgc:1533729976.857ENSOMEG00000016783zgc:1533729776.857Oryzias_melastigma
ENSXCOG00000012774zgc:1533729050.473ENSOGAG00000004341AS3MT8550.313Otolemur_garnettii
ENSXCOG00000012774zgc:1533729848.596ENSOARG00000002541AS3MT9448.870Ovis_aries
ENSXCOG00000012774zgc:1533729844.759ENSPPAG00000040457AS3MT9344.759Pan_paniscus
ENSXCOG00000012774zgc:1533729748.127ENSPPRG00000004722AS3MT9548.127Panthera_pardus
ENSXCOG00000012774zgc:1533729848.138ENSPTIG00000005929AS3MT9550.949Panthera_tigris_altaica
ENSXCOG00000012774zgc:1533729844.759ENSPTRG00000033989AS3MT9344.759Pan_troglodytes
ENSXCOG00000012774zgc:1533728947.619ENSPANG00000020981AS3MT8347.923Papio_anubis
ENSXCOG00000012774zgc:1533729961.782ENSPKIG00000009422zgc:1533729161.960Paramormyrops_kingsleyae
ENSXCOG00000012774zgc:1533729447.447ENSPKIG00000001196as3mt8447.447Paramormyrops_kingsleyae
ENSXCOG00000012774zgc:1533728449.329ENSPSIG00000004098AS3MT8749.329Pelodiscus_sinensis
ENSXCOG00000012774zgc:1533729964.023ENSPMGG00000021114zgc:1533729764.103Periophthalmus_magnuspinnatus
ENSXCOG00000012774zgc:1533728749.675ENSPEMG00000011699As3mt8249.675Peromyscus_maniculatus_bairdii
ENSXCOG00000012774zgc:1533729948.424ENSPFOG00000005360as3mt9847.500Poecilia_formosa
ENSXCOG00000012774zgc:1533729993.447ENSPFOG00000007565zgc:1533729793.696Poecilia_formosa
ENSXCOG00000012774zgc:1533729948.997ENSPLAG00000014626as3mt9848.056Poecilia_latipinna
ENSXCOG00000012774zgc:1533729993.447ENSPLAG00000020657zgc:1533729793.696Poecilia_latipinna
ENSXCOG00000012774zgc:1533729993.162ENSPMEG00000003910zgc:1533729793.410Poecilia_mexicana
ENSXCOG00000012774zgc:1533729948.711ENSPMEG00000018934as3mt9847.778Poecilia_mexicana
ENSXCOG00000012774zgc:1533729848.451ENSPREG00000000469as3mt9848.451Poecilia_reticulata
ENSXCOG00000012774zgc:1533729994.302ENSPREG00000021951zgc:1533729892.997Poecilia_reticulata
ENSXCOG00000012774zgc:1533729845.455ENSPPYG00000002614AS3MT9145.714Pongo_abelii
ENSXCOG00000012774zgc:1533729846.328ENSPCOG00000019900AS3MT9346.328Propithecus_coquereli
ENSXCOG00000012774zgc:1533729966.761ENSPNYG00000016454zgc:1533729766.952Pundamilia_nyererei
ENSXCOG00000012774zgc:1533729648.968ENSPNYG00000003664as3mt8948.547Pundamilia_nyererei
ENSXCOG00000012774zgc:1533729746.686ENSPNAG00000010264as3mt9046.686Pygocentrus_nattereri
ENSXCOG00000012774zgc:1533729960.571ENSPNAG00000015315zgc:1533729359.773Pygocentrus_nattereri
ENSXCOG00000012774zgc:1533729846.243ENSRNOG00000020081As3mt9346.243Rattus_norvegicus
ENSXCOG00000012774zgc:1533725843.602ENSRBIG00000038013AS3MT6843.602Rhinopithecus_bieti
ENSXCOG00000012774zgc:1533729844.759ENSRROG00000030773AS3MT9344.759Rhinopithecus_roxellana
ENSXCOG00000012774zgc:1533729945.455ENSSBOG00000033111AS3MT9245.821Saimiri_boliviensis_boliviensis
ENSXCOG00000012774zgc:1533729747.076ENSSFOG00015003668as3mt9047.076Scleropages_formosus
ENSXCOG00000012774zgc:1533729960.345ENSSFOG00015011852zgc:1533729660.519Scleropages_formosus
ENSXCOG00000012774zgc:1533729548.358ENSSMAG00000006450as3mt8250.000Scophthalmus_maximus
ENSXCOG00000012774zgc:1533729978.857ENSSMAG00000017695zgc:1533729778.857Scophthalmus_maximus
ENSXCOG00000012774zgc:1533729549.254ENSSDUG00000021471as3mt8351.429Seriola_dumerili
ENSXCOG00000012774zgc:1533729978.571ENSSDUG00000014867zgc:1533729778.571Seriola_dumerili
ENSXCOG00000012774zgc:1533729549.552ENSSLDG00000010514as3mt8351.746Seriola_lalandi_dorsalis
ENSXCOG00000012774zgc:1533729972.286ENSSLDG00000021418zgc:1533729772.493Seriola_lalandi_dorsalis
ENSXCOG00000012774zgc:1533728648.366ENSSARG00000003676AS3MT8148.366Sorex_araneus
ENSXCOG00000012774zgc:1533729548.415ENSSPUG00000011056AS3MT9248.571Sphenodon_punctatus
ENSXCOG00000012774zgc:1533729647.368ENSSPAG00000018827as3mt9146.974Stegastes_partitus
ENSXCOG00000012774zgc:1533729971.105ENSSPAG00000015711zgc:1533729771.105Stegastes_partitus
ENSXCOG00000012774zgc:1533728950.794ENSSSCG00000010592AS3MT8351.118Sus_scrofa
ENSXCOG00000012774zgc:1533728849.518ENSTGUG00000010233AS3MT9649.677Taeniopygia_guttata
ENSXCOG00000012774zgc:1533727747.826ENSTBEG00000014369AS3MT7247.826Tupaia_belangeri
ENSXCOG00000012774zgc:1533728751.140ENSTTRG00000012624AS3MT8051.140Tursiops_truncatus
ENSXCOG00000012774zgc:1533728950.794ENSUAMG00000026651AS3MT6950.955Ursus_americanus
ENSXCOG00000012774zgc:1533729447.592ENSUMAG00000023512AS3MT9447.592Ursus_maritimus
ENSXCOG00000012774zgc:1533726249.315ENSVPAG00000007397AS3MT8149.315Vicugna_pacos
ENSXCOG00000012774zgc:1533729848.305ENSVVUG00000004307AS3MT9348.580Vulpes_vulpes
ENSXCOG00000012774zgc:1533728848.867ENSXETG00000009462as3mt.19648.882Xenopus_tropicalis
ENSXCOG00000012774zgc:1533729337.690ENSXETG00000031996-9237.690Xenopus_tropicalis
ENSXCOG00000012774zgc:1533729948.732ENSXMAG00000000056as3mt9348.732Xiphophorus_maculatus
ENSXCOG00000012774zgc:15337210098.867ENSXMAG00000008552zgc:15337210098.867Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us