EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000012791 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162730
Alias: fi61b04|wu:fi61b04
Full Name: zgc:162730
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 1422 bases
Position: chrKQ557210.1:14543903-14545324
Accession: ZDB-GENE-030131-6366
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000016964	zf-CCCH	PF00642.24	9.1e-19	1	2
ENSXCOP00000016964	zf-CCCH	PF00642.24	9.1e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000017183	-	1245	-	ENSXCOP00000016964	414 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012791's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000012791	zgc:162730	61	35.985	ENSXCOG00000010688	sb:cb81	86	36.226

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012791	zgc:162730	100	77.700	ENSAPOG00000014920	zgc:162730	100	77.465	Acanthochromis_polyacanthus
ENSXCOG00000012791	zgc:162730	84	36.827	ENSAPOG00000011209	sb:cb81	83	39.368	Acanthochromis_polyacanthus
ENSXCOG00000012791	zgc:162730	61	41.091	ENSACIG00000009027	sb:cb81	77	38.889	Amphilophus_citrinellus
ENSXCOG00000012791	zgc:162730	58	68.182	ENSACIG00000017366	zgc:162730	97	68.182	Amphilophus_citrinellus
ENSXCOG00000012791	zgc:162730	100	77.465	ENSAOCG00000002001	zgc:162730	100	77.230	Amphiprion_ocellaris
ENSXCOG00000012791	zgc:162730	85	35.263	ENSAOCG00000024158	sb:cb81	78	38.095	Amphiprion_ocellaris
ENSXCOG00000012791	zgc:162730	85	35.000	ENSAPEG00000022405	sb:cb81	78	38.375	Amphiprion_percula
ENSXCOG00000012791	zgc:162730	94	78.446	ENSAPEG00000015490	zgc:162730	98	77.945	Amphiprion_percula
ENSXCOG00000012791	zgc:162730	90	36.453	ENSATEG00000003462	sb:cb81	78	38.147	Anabas_testudineus
ENSXCOG00000012791	zgc:162730	100	69.159	ENSATEG00000008790	zgc:162730	100	70.561	Anabas_testudineus
ENSXCOG00000012791	zgc:162730	100	71.021	ENSACLG00000022112	zgc:162730	100	70.784	Astatotilapia_calliptera
ENSXCOG00000012791	zgc:162730	90	37.685	ENSACLG00000013759	sb:cb81	77	39.227	Astatotilapia_calliptera
ENSXCOG00000012791	zgc:162730	71	42.345	ENSAMXG00000034874	sb:cb81	81	38.462	Astyanax_mexicanus
ENSXCOG00000012791	zgc:162730	100	45.433	ENSAMXG00000035945	zgc:162730	99	44.471	Astyanax_mexicanus
ENSXCOG00000012791	zgc:162730	87	36.634	ENSCSEG00000014426	sb:cb81	66	38.162	Cynoglossus_semilaevis
ENSXCOG00000012791	zgc:162730	99	67.536	ENSCSEG00000018283	zgc:162730	100	63.397	Cynoglossus_semilaevis
ENSXCOG00000012791	zgc:162730	100	84.928	ENSCVAG00000018571	zgc:162730	100	84.450	Cyprinodon_variegatus
ENSXCOG00000012791	zgc:162730	87	36.990	ENSCVAG00000009207	sb:cb81	79	38.504	Cyprinodon_variegatus
ENSXCOG00000012791	zgc:162730	100	45.238	ENSDARG00000103720	zgc:162730	85	49.558	Danio_rerio
ENSXCOG00000012791	zgc:162730	84	37.197	ENSDARG00000040503	sb:cb81	78	39.542	Danio_rerio
ENSXCOG00000012791	zgc:162730	70	38.141	ENSDARG00000040725	zgc:114130	67	35.294	Danio_rerio
ENSXCOG00000012791	zgc:162730	99	35.601	ENSELUG00000013045	sb:cb81	77	38.439	Esox_lucius
ENSXCOG00000012791	zgc:162730	100	53.444	ENSELUG00000013158	zgc:162730	100	53.207	Esox_lucius
ENSXCOG00000012791	zgc:162730	99	35.892	ENSFHEG00000022187	sb:cb81	79	39.402	Fundulus_heteroclitus
ENSXCOG00000012791	zgc:162730	100	85.407	ENSFHEG00000013710	zgc:162730	100	85.407	Fundulus_heteroclitus
ENSXCOG00000012791	zgc:162730	79	64.179	ENSGMOG00000017242	zgc:162730	99	65.075	Gadus_morhua
ENSXCOG00000012791	zgc:162730	51	46.262	ENSGAFG00000015700	sb:cb81	76	39.883	Gambusia_affinis
ENSXCOG00000012791	zgc:162730	100	95.913	ENSGAFG00000009953	zgc:162730	100	95.913	Gambusia_affinis
ENSXCOG00000012791	zgc:162730	79	71.131	ENSGACG00000008351	zgc:162730	99	72.024	Gasterosteus_aculeatus
ENSXCOG00000012791	zgc:162730	83	39.459	ENSGACG00000013400	sb:cb81	95	39.216	Gasterosteus_aculeatus
ENSXCOG00000012791	zgc:162730	100	70.784	ENSHBUG00000015057	zgc:162730	100	70.546	Haplochromis_burtoni
ENSXCOG00000012791	zgc:162730	65	42.361	ENSHBUG00000002383	sb:cb81	78	38.904	Haplochromis_burtoni
ENSXCOG00000012791	zgc:162730	100	69.767	ENSHCOG00000015801	zgc:162730	100	70.465	Hippocampus_comes
ENSXCOG00000012791	zgc:162730	52	46.396	ENSIPUG00000011378	sb:cb81	76	40.116	Ictalurus_punctatus
ENSXCOG00000012791	zgc:162730	100	44.976	ENSIPUG00000018248	zgc:162730	100	44.019	Ictalurus_punctatus
ENSXCOG00000012791	zgc:162730	84	39.733	ENSKMAG00000009884	sb:cb81	77	39.155	Kryptolebias_marmoratus
ENSXCOG00000012791	zgc:162730	100	77.069	ENSKMAG00000019277	zgc:162730	100	76.832	Kryptolebias_marmoratus
ENSXCOG00000012791	zgc:162730	67	40.138	ENSLBEG00000018376	sb:cb81	75	38.202	Labrus_bergylta
ENSXCOG00000012791	zgc:162730	100	68.998	ENSLBEG00000018380	zgc:162730	100	69.697	Labrus_bergylta
ENSXCOG00000012791	zgc:162730	85	35.401	ENSLBEG00000018387	zgc:114130	65	41.379	Labrus_bergylta
ENSXCOG00000012791	zgc:162730	99	38.534	ENSLACG00000015732	sb:cb81	97	36.993	Latimeria_chalumnae
ENSXCOG00000012791	zgc:162730	100	37.500	ENSLACG00000015980	-	84	40.517	Latimeria_chalumnae
ENSXCOG00000012791	zgc:162730	99	38.084	ENSLOCG00000014587	sb:cb81	97	40.046	Lepisosteus_oculatus
ENSXCOG00000012791	zgc:162730	100	48.605	ENSLOCG00000014597	zgc:162730	100	48.712	Lepisosteus_oculatus
ENSXCOG00000012791	zgc:162730	73	36.335	ENSMAMG00000007511	zgc:114130	70	36.943	Mastacembelus_armatus
ENSXCOG00000012791	zgc:162730	65	43.110	ENSMAMG00000020144	sb:cb81	70	40.599	Mastacembelus_armatus
ENSXCOG00000012791	zgc:162730	100	71.562	ENSMAMG00000007516	zgc:162730	99	72.960	Mastacembelus_armatus
ENSXCOG00000012791	zgc:162730	100	66.187	ENSMZEG00005014415	zgc:162730	97	69.421	Maylandia_zebra
ENSXCOG00000012791	zgc:162730	90	38.272	ENSMZEG00005016001	-	77	39.889	Maylandia_zebra
ENSXCOG00000012791	zgc:162730	65	42.857	ENSMZEG00005024684	sb:cb81	77	39.612	Maylandia_zebra
ENSXCOG00000012791	zgc:162730	59	70.161	ENSMMOG00000011506	zgc:162730	99	72.177	Mola_mola
ENSXCOG00000012791	zgc:162730	65	42.403	ENSMMOG00000010073	sb:cb81	66	43.262	Mola_mola
ENSXCOG00000012791	zgc:162730	100	68.605	ENSMALG00000002348	zgc:162730	100	69.302	Monopterus_albus
ENSXCOG00000012791	zgc:162730	100	71.021	ENSNBRG00000013701	zgc:162730	100	70.784	Neolamprologus_brichardi
ENSXCOG00000012791	zgc:162730	65	42.509	ENSNBRG00000006231	sb:cb81	76	40.286	Neolamprologus_brichardi
ENSXCOG00000012791	zgc:162730	65	41.608	ENSONIG00000001259	sb:cb81	77	39.024	Oreochromis_niloticus
ENSXCOG00000012791	zgc:162730	82	65.698	ENSONIG00000005003	zgc:162730	98	68.529	Oreochromis_niloticus
ENSXCOG00000012791	zgc:162730	87	38.522	ENSORLG00000024026	sb:cb81	67	39.943	Oryzias_latipes
ENSXCOG00000012791	zgc:162730	99	60.757	ENSORLG00000027149	zgc:162730	100	62.648	Oryzias_latipes
ENSXCOG00000012791	zgc:162730	99	61.229	ENSORLG00020020289	zgc:162730	100	63.121	Oryzias_latipes_hni
ENSXCOG00000012791	zgc:162730	99	61.792	ENSORLG00015001519	zgc:162730	100	63.443	Oryzias_latipes_hsok
ENSXCOG00000012791	zgc:162730	87	37.234	ENSORLG00015010105	sb:cb81	78	40.909	Oryzias_latipes_hsok
ENSXCOG00000012791	zgc:162730	99	63.551	ENSOMEG00000017752	zgc:162730	100	64.929	Oryzias_melastigma
ENSXCOG00000012791	zgc:162730	58	42.231	ENSOMEG00000020565	sb:cb81	77	40.171	Oryzias_melastigma
ENSXCOG00000012791	zgc:162730	84	38.108	ENSPFOG00000013806	sb:cb81	76	38.873	Poecilia_formosa
ENSXCOG00000012791	zgc:162730	100	93.750	ENSPFOG00000003665	zgc:162730	100	93.750	Poecilia_formosa
ENSXCOG00000012791	zgc:162730	100	93.510	ENSPLAG00000000946	zgc:162730	100	93.510	Poecilia_latipinna
ENSXCOG00000012791	zgc:162730	84	37.838	ENSPLAG00000020158	sb:cb81	83	38.310	Poecilia_latipinna
ENSXCOG00000012791	zgc:162730	84	38.108	ENSPMEG00000022425	sb:cb81	76	38.873	Poecilia_mexicana
ENSXCOG00000012791	zgc:162730	100	93.990	ENSPMEG00000000341	zgc:162730	100	93.990	Poecilia_mexicana
ENSXCOG00000012791	zgc:162730	100	93.990	ENSPREG00000021263	zgc:162730	100	93.990	Poecilia_reticulata
ENSXCOG00000012791	zgc:162730	51	44.393	ENSPREG00000017495	sb:cb81	76	38.268	Poecilia_reticulata
ENSXCOG00000012791	zgc:162730	65	42.361	ENSPNYG00000007502	sb:cb81	76	40.057	Pundamilia_nyererei
ENSXCOG00000012791	zgc:162730	100	71.021	ENSPNYG00000015553	zgc:162730	100	70.784	Pundamilia_nyererei
ENSXCOG00000012791	zgc:162730	99	38.173	ENSPNAG00000030063	sb:cb81	78	41.787	Pygocentrus_nattereri
ENSXCOG00000012791	zgc:162730	64	35.401	ENSPNAG00000023029	zgc:114130	93	31.136	Pygocentrus_nattereri
ENSXCOG00000012791	zgc:162730	100	45.346	ENSPNAG00000023018	zgc:162730	100	45.694	Pygocentrus_nattereri
ENSXCOG00000012791	zgc:162730	83	39.149	ENSSFOG00015003179	sb:cb81	75	36.416	Scleropages_formosus
ENSXCOG00000012791	zgc:162730	57	36.364	ENSSMAG00000004403	sb:cb81	94	36.508	Scophthalmus_maximus
ENSXCOG00000012791	zgc:162730	100	70.163	ENSSMAG00000018612	zgc:162730	100	70.862	Scophthalmus_maximus
ENSXCOG00000012791	zgc:162730	100	72.685	ENSSDUG00000002247	zgc:162730	100	73.380	Seriola_dumerili
ENSXCOG00000012791	zgc:162730	84	39.637	ENSSDUG00000004426	sb:cb81	76	40.947	Seriola_dumerili
ENSXCOG00000012791	zgc:162730	73	34.663	ENSSDUG00000002237	zgc:114130	60	38.346	Seriola_dumerili
ENSXCOG00000012791	zgc:162730	84	39.637	ENSSLDG00000018035	sb:cb81	77	40.947	Seriola_lalandi_dorsalis
ENSXCOG00000012791	zgc:162730	100	72.222	ENSSLDG00000008502	zgc:162730	100	72.917	Seriola_lalandi_dorsalis
ENSXCOG00000012791	zgc:162730	100	76.526	ENSSPAG00000006851	zgc:162730	100	77.230	Stegastes_partitus
ENSXCOG00000012791	zgc:162730	65	40.357	ENSSPAG00000013546	sb:cb81	80	39.612	Stegastes_partitus
ENSXCOG00000012791	zgc:162730	100	67.689	ENSTRUG00000021229	zgc:162730	100	68.396	Takifugu_rubripes
ENSXCOG00000012791	zgc:162730	85	35.753	ENSTRUG00000020720	sb:cb81	81	36.193	Takifugu_rubripes
ENSXCOG00000012791	zgc:162730	94	63.476	ENSTNIG00000000183	zgc:162730	98	66.499	Tetraodon_nigroviridis
ENSXCOG00000012791	zgc:162730	65	38.434	ENSXETG00000016987	zfp36l1	68	38.078	Xenopus_tropicalis
ENSXCOG00000012791	zgc:162730	84	40.166	ENSXMAG00000004681	sb:cb81	76	40.173	Xiphophorus_maculatus
ENSXCOG00000012791	zgc:162730	100	99.517	ENSXMAG00000018206	zgc:162730	100	99.517	Xiphophorus_maculatus