EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000012792 (Gene tree)
Gene ID: -
Gene Symbol: zgc:114130
Alias: fb92b09|wu:fb92b09
Full Name: zgc:114130
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 1799 bases
Position: chrKQ557210.1:14577984-14579782
Accession: ZDB-GENE-050913-48
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000016965	zf-CCCH	PF00642.24	1e-20	1	2
ENSXCOP00000016965	zf-CCCH	PF00642.24	1e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000017184	-	960	-	ENSXCOP00000016965	319 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012792's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012792's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012792	zgc:114130	96	56.667	ENSAPOG00000014912	zgc:114130	89	57.179	Acanthochromis_polyacanthus
ENSXCOG00000012792	zgc:114130	64	37.551	ENSAPOG00000020931	zfp36l1a	61	42.241	Acanthochromis_polyacanthus
ENSXCOG00000012792	zgc:114130	85	55.714	ENSACIG00000017364	zgc:114130	96	57.714	Amphilophus_citrinellus
ENSXCOG00000012792	zgc:114130	64	38.655	ENSAOCG00000019239	zfp36l1a	61	42.241	Amphiprion_ocellaris
ENSXCOG00000012792	zgc:114130	96	56.489	ENSAOCG00000022227	zgc:114130	89	56.997	Amphiprion_ocellaris
ENSXCOG00000012792	zgc:114130	64	38.655	ENSAPEG00000010246	zfp36l1a	61	42.241	Amphiprion_percula
ENSXCOG00000012792	zgc:114130	96	56.743	ENSAPEG00000015497	zgc:114130	89	57.252	Amphiprion_percula
ENSXCOG00000012792	zgc:114130	90	56.486	ENSATEG00000008781	zgc:114130	83	55.135	Anabas_testudineus
ENSXCOG00000012792	zgc:114130	96	55.875	ENSACLG00000022113	zgc:114130	89	55.875	Astatotilapia_calliptera
ENSXCOG00000012792	zgc:114130	63	43.697	ENSAMXG00000038581	zgc:114130	80	40.870	Astyanax_mexicanus
ENSXCOG00000012792	zgc:114130	96	51.680	ENSCSEG00000018290	zgc:114130	84	52.473	Cynoglossus_semilaevis
ENSXCOG00000012792	zgc:114130	96	64.433	ENSCVAG00000018574	zgc:114130	90	64.433	Cyprinodon_variegatus
ENSXCOG00000012792	zgc:114130	80	45.574	ENSDARG00000040725	zgc:114130	74	45.183	Danio_rerio
ENSXCOG00000012792	zgc:114130	78	43.772	ENSDARG00000040503	sb:cb81	75	43.662	Danio_rerio
ENSXCOG00000012792	zgc:114130	64	42.083	ENSDARG00000016154	zfp36l1a	61	42.060	Danio_rerio
ENSXCOG00000012792	zgc:114130	86	35.417	ENSELUG00000013045	sb:cb81	55	39.565	Esox_lucius
ENSXCOG00000012792	zgc:114130	89	45.509	ENSELUG00000013151	zgc:114130	81	46.667	Esox_lucius
ENSXCOG00000012792	zgc:114130	96	59.231	ENSFHEG00000000656	zgc:114130	90	61.795	Fundulus_heteroclitus
ENSXCOG00000012792	zgc:114130	80	45.833	ENSGMOG00000017223	zgc:114130	98	45.833	Gadus_morhua
ENSXCOG00000012792	zgc:114130	83	80.000	ENSGAFG00000009949	zgc:114130	92	80.000	Gambusia_affinis
ENSXCOG00000012792	zgc:114130	80	58.786	ENSGACG00000008344	zgc:114130	98	58.599	Gasterosteus_aculeatus
ENSXCOG00000012792	zgc:114130	96	56.919	ENSHBUG00000015051	zgc:114130	89	57.180	Haplochromis_burtoni
ENSXCOG00000012792	zgc:114130	88	53.198	ENSHCOG00000015800	zgc:114130	81	52.326	Hippocampus_comes
ENSXCOG00000012792	zgc:114130	87	45.066	ENSIPUG00000018256	zgc:114130	68	42.904	Ictalurus_punctatus
ENSXCOG00000012792	zgc:114130	96	59.231	ENSKMAG00000019287	zgc:114130	89	59.487	Kryptolebias_marmoratus
ENSXCOG00000012792	zgc:114130	89	53.911	ENSLBEG00000018387	zgc:114130	83	53.073	Labrus_bergylta
ENSXCOG00000012792	zgc:114130	62	39.151	ENSLACG00000015980	-	51	41.758	Latimeria_chalumnae
ENSXCOG00000012792	zgc:114130	96	56.283	ENSMAMG00000007511	zgc:114130	81	57.423	Mastacembelus_armatus
ENSXCOG00000012792	zgc:114130	96	56.136	ENSMZEG00005014410	zgc:114130	89	56.136	Maylandia_zebra
ENSXCOG00000012792	zgc:114130	87	58.824	ENSMMOG00000011504	zgc:114130	95	60.350	Mola_mola
ENSXCOG00000012792	zgc:114130	81	59.416	ENSNBRG00000013703	zgc:114130	94	59.740	Neolamprologus_brichardi
ENSXCOG00000012792	zgc:114130	80	56.740	ENSONIG00000005004	zgc:114130	98	57.500	Oreochromis_niloticus
ENSXCOG00000012792	zgc:114130	65	39.916	ENSPFOG00000017436	zfp36l1a	59	39.316	Poecilia_formosa
ENSXCOG00000012792	zgc:114130	96	75.573	ENSPFOG00000003653	zgc:114130	99	77.843	Poecilia_formosa
ENSXCOG00000012792	zgc:114130	96	75.959	ENSPLAG00000000947	zgc:114130	91	76.471	Poecilia_latipinna
ENSXCOG00000012792	zgc:114130	65	39.916	ENSPMEG00000013028	zfp36l1a	59	39.316	Poecilia_mexicana
ENSXCOG00000012792	zgc:114130	96	72.265	ENSPMEG00000015335	zgc:114130	91	73.282	Poecilia_mexicana
ENSXCOG00000012792	zgc:114130	96	75.448	ENSPREG00000021254	zgc:114130	91	75.703	Poecilia_reticulata
ENSXCOG00000012792	zgc:114130	96	56.545	ENSPNYG00000015546	zgc:114130	89	56.806	Pundamilia_nyererei
ENSXCOG00000012792	zgc:114130	62	33.624	ENSSFOG00015003179	sb:cb81	73	32.759	Scleropages_formosus
ENSXCOG00000012792	zgc:114130	89	55.616	ENSSMAG00000018621	zgc:114130	80	54.223	Scophthalmus_maximus
ENSXCOG00000012792	zgc:114130	96	58.524	ENSSDUG00000002237	zgc:114130	85	59.189	Seriola_dumerili
ENSXCOG00000012792	zgc:114130	96	58.163	ENSSLDG00000008496	zgc:114130	85	58.808	Seriola_lalandi_dorsalis
ENSXCOG00000012792	zgc:114130	96	57.179	ENSSPAG00000006856	zgc:114130	89	58.140	Stegastes_partitus
ENSXCOG00000012792	zgc:114130	90	51.648	ENSTRUG00000022473	zgc:114130	83	52.066	Takifugu_rubripes
ENSXCOG00000012792	zgc:114130	96	78.462	ENSXMAG00000026836	zgc:114130	91	78.462	Xiphophorus_maculatus