EuRBPDB

Description

Ensembl ID: ENSXCOG00000012853 (Gene tree)
Gene ID: -
Gene Symbol: taf15
Alias: fa11g05|wu:fa11g05|wu:fc02g02|zgc:158363
Full Name: TAF15 RNA polymerase II%2C TATA box binding protein (TBP)-associated factor
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 4140 bases
Position: chrKQ557210.1:16104429-16108568
Accession: ZDB-GENE-061215-102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000017034	zf-RanBP	PF00641.18	4.7e-09	1	1
ENSXCOP00000017034	RRM_1	PF00076.22	2.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000017254	-	912	-	ENSXCOP00000017034	303 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012853	taf15	51	88.608	ENSACIG00000008575	taf15	88	91.304	Amphilophus_citrinellus
ENSXCOG00000012853	taf15	51	80.982	ENSELUG00000016061	taf15	67	64.419	Esox_lucius
ENSXCOG00000012853	taf15	52	86.982	ENSFHEG00000002789	taf15	73	64.474	Fundulus_heteroclitus
ENSXCOG00000012853	taf15	53	78.161	ENSGMOG00000016823	taf15	55	79.310	Gadus_morhua
ENSXCOG00000012853	taf15	69	91.515	ENSGAFG00000007198	taf15	50	91.515	Gambusia_affinis
ENSXCOG00000012853	taf15	51	89.172	ENSKMAG00000001916	taf15	70	68.914	Kryptolebias_marmoratus
ENSXCOG00000012853	taf15	52	89.634	ENSORLG00000011382	taf15	59	89.222	Oryzias_latipes
ENSXCOG00000012853	taf15	80	66.795	ENSPMGG00000010424	taf15	74	63.251	Periophthalmus_magnuspinnatus
ENSXCOG00000012853	taf15	74	87.179	ENSPREG00000018762	taf15	78	87.984	Poecilia_reticulata
ENSXCOG00000012853	taf15	53	89.697	ENSPNYG00000012865	taf15	67	69.261	Pundamilia_nyererei
ENSXCOG00000012853	taf15	53	82.609	ENSSFOG00015004086	taf15	57	64.344	Scleropages_formosus
ENSXCOG00000012853	taf15	68	67.442	ENSTRUG00000007798	taf15	67	59.298	Takifugu_rubripes
ENSXCOG00000012853	taf15	77	98.630	ENSXMAG00000010983	taf15	50	97.297	Xiphophorus_maculatus