EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000012940 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2355 bases
Position: chrKQ557225.1:53352444-53354798
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000017164	Exo_endo_phos	PF03372.23	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000017384	-	1074	-	ENSXCOP00000017164	357 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000012940	-	99	36.911	ENSXCOG00000009068	-	86	36.911

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012940	-	98	32.181	ENSAPOG00000021898	-	79	32.181	Acanthochromis_polyacanthus
ENSXCOG00000012940	-	98	32.447	ENSAPOG00000010713	-	95	32.172	Acanthochromis_polyacanthus
ENSXCOG00000012940	-	97	40.108	ENSAPOG00000012457	-	86	40.108	Acanthochromis_polyacanthus
ENSXCOG00000012940	-	91	34.483	ENSAPOG00000016904	-	87	34.483	Acanthochromis_polyacanthus
ENSXCOG00000012940	-	96	43.562	ENSACIG00000008906	-	81	43.562	Amphilophus_citrinellus
ENSXCOG00000012940	-	93	34.807	ENSACIG00000012844	-	89	34.795	Amphilophus_citrinellus
ENSXCOG00000012940	-	84	42.857	ENSACIG00000019184	-	79	42.857	Amphilophus_citrinellus
ENSXCOG00000012940	-	92	30.939	ENSACAG00000022384	-	96	30.663	Anolis_carolinensis
ENSXCOG00000012940	-	98	30.990	ENSACAG00000024977	-	74	30.990	Anolis_carolinensis
ENSXCOG00000012940	-	90	30.398	ENSACAG00000026784	-	95	30.791	Anolis_carolinensis
ENSXCOG00000012940	-	97	30.688	ENSACAG00000010540	-	91	30.688	Anolis_carolinensis
ENSXCOG00000012940	-	98	32.461	ENSACAG00000023809	-	79	32.461	Anolis_carolinensis
ENSXCOG00000012940	-	83	30.625	ENSACAG00000025708	-	87	30.625	Anolis_carolinensis
ENSXCOG00000012940	-	66	30.502	ENSACAG00000024104	-	93	30.204	Anolis_carolinensis
ENSXCOG00000012940	-	98	31.332	ENSACAG00000001859	-	75	30.829	Anolis_carolinensis
ENSXCOG00000012940	-	95	32.011	ENSACAG00000022659	-	98	32.011	Anolis_carolinensis
ENSXCOG00000012940	-	83	36.792	ENSACLG00000001544	-	89	36.792	Astatotilapia_calliptera
ENSXCOG00000012940	-	83	43.478	ENSACLG00000004195	-	77	43.478	Astatotilapia_calliptera
ENSXCOG00000012940	-	58	38.696	ENSACLG00000005243	-	91	38.696	Astatotilapia_calliptera
ENSXCOG00000012940	-	99	35.372	ENSACLG00000023741	-	80	35.372	Astatotilapia_calliptera
ENSXCOG00000012940	-	95	42.700	ENSACLG00000001415	-	82	42.700	Astatotilapia_calliptera
ENSXCOG00000012940	-	71	33.333	ENSACLG00000027777	-	98	33.333	Astatotilapia_calliptera
ENSXCOG00000012940	-	97	33.602	ENSACLG00000003399	-	99	33.602	Astatotilapia_calliptera
ENSXCOG00000012940	-	98	34.037	ENSACLG00000003105	-	81	34.037	Astatotilapia_calliptera
ENSXCOG00000012940	-	99	30.000	ENSBTAG00000051661	-	52	30.000	Bos_taurus
ENSXCOG00000012940	-	99	30.000	ENSBTAG00000049832	-	55	30.000	Bos_taurus
ENSXCOG00000012940	-	98	30.667	ENSCAFG00020005033	-	57	30.667	Canis_lupus_dingo
ENSXCOG00000012940	-	98	30.851	ENSCAFG00020025733	-	55	30.851	Canis_lupus_dingo
ENSXCOG00000012940	-	98	31.383	ENSCAFG00020025686	-	57	31.383	Canis_lupus_dingo
ENSXCOG00000012940	-	98	31.383	ENSCAFG00020005832	-	57	31.383	Canis_lupus_dingo
ENSXCOG00000012940	-	96	34.270	ENSCVAG00000008582	-	84	34.270	Cyprinodon_variegatus
ENSXCOG00000012940	-	97	39.353	ENSFHEG00000007794	-	82	39.353	Fundulus_heteroclitus
ENSXCOG00000012940	-	93	33.144	ENSKMAG00000002817	-	76	33.144	Kryptolebias_marmoratus
ENSXCOG00000012940	-	90	32.659	ENSLACG00000009073	-	93	32.659	Latimeria_chalumnae
ENSXCOG00000012940	-	98	33.690	ENSLACG00000001984	-	97	32.888	Latimeria_chalumnae
ENSXCOG00000012940	-	67	31.461	ENSLACG00000003798	-	97	35.795	Latimeria_chalumnae
ENSXCOG00000012940	-	99	35.356	ENSLACG00000008451	-	81	35.356	Latimeria_chalumnae
ENSXCOG00000012940	-	96	31.549	ENSLACG00000013797	-	98	31.549	Latimeria_chalumnae
ENSXCOG00000012940	-	99	32.891	ENSLACG00000004681	-	88	32.891	Latimeria_chalumnae
ENSXCOG00000012940	-	77	35.739	ENSLACG00000009787	-	91	35.739	Latimeria_chalumnae
ENSXCOG00000012940	-	98	35.753	ENSLACG00000005942	-	86	35.753	Latimeria_chalumnae
ENSXCOG00000012940	-	84	33.846	ENSLACG00000002295	-	91	33.846	Latimeria_chalumnae
ENSXCOG00000012940	-	98	34.853	ENSLACG00000010026	-	79	34.853	Latimeria_chalumnae
ENSXCOG00000012940	-	87	42.687	ENSMZEG00005017035	-	87	42.687	Maylandia_zebra
ENSXCOG00000012940	-	70	34.182	ENSMZEG00005015499	-	99	34.182	Maylandia_zebra
ENSXCOG00000012940	-	74	32.753	ENSMZEG00005026934	-	99	32.753	Maylandia_zebra
ENSXCOG00000012940	-	98	40.214	ENSMZEG00005021840	-	82	40.214	Maylandia_zebra
ENSXCOG00000012940	-	83	36.164	ENSMZEG00005013453	-	97	34.195	Maylandia_zebra
ENSXCOG00000012940	-	98	42.204	ENSMZEG00005016749	-	86	42.204	Maylandia_zebra
ENSXCOG00000012940	-	54	56.542	ENSMZEG00005019175	-	93	56.542	Maylandia_zebra
ENSXCOG00000012940	-	87	33.956	ENSMMOG00000005815	-	79	33.645	Mola_mola
ENSXCOG00000012940	-	88	30.473	ENSMODG00000028295	-	95	30.473	Monodelphis_domestica
ENSXCOG00000012940	-	84	31.193	ENSMODG00000028497	-	96	31.193	Monodelphis_domestica
ENSXCOG00000012940	-	82	30.312	ENSMODG00000028119	-	96	30.312	Monodelphis_domestica
ENSXCOG00000012940	-	84	31.707	ENSMODG00000028110	-	97	31.707	Monodelphis_domestica
ENSXCOG00000012940	-	98	30.053	ENSMODG00000028754	-	90	30.053	Monodelphis_domestica
ENSXCOG00000012940	-	83	31.269	ENSMODG00000029216	-	98	31.269	Monodelphis_domestica
ENSXCOG00000012940	-	75	30.169	ENSMODG00000027902	-	98	30.169	Monodelphis_domestica
ENSXCOG00000012940	-	87	30.564	ENSMODG00000029189	-	95	30.887	Monodelphis_domestica
ENSXCOG00000012940	-	84	31.173	ENSMODG00000029202	-	98	31.173	Monodelphis_domestica
ENSXCOG00000012940	-	98	30.053	ENSMODG00000027367	-	78	30.053	Monodelphis_domestica
ENSXCOG00000012940	-	84	30.247	ENSMODG00000029048	-	94	30.247	Monodelphis_domestica
ENSXCOG00000012940	-	74	30.241	ENSMODG00000029688	-	98	30.241	Monodelphis_domestica
ENSXCOG00000012940	-	84	30.247	ENSMODG00000029727	-	94	30.247	Monodelphis_domestica
ENSXCOG00000012940	-	98	30.053	ENSMODG00000027780	-	70	30.053	Monodelphis_domestica
ENSXCOG00000012940	-	84	30.247	ENSMODG00000028779	-	93	30.247	Monodelphis_domestica
ENSXCOG00000012940	-	97	30.027	ENSMODG00000028148	-	76	30.027	Monodelphis_domestica
ENSXCOG00000012940	-	87	31.157	ENSMODG00000028762	-	98	31.157	Monodelphis_domestica
ENSXCOG00000012940	-	81	31.013	ENSMODG00000028731	-	97	31.013	Monodelphis_domestica
ENSXCOG00000012940	-	83	30.124	ENSMODG00000028105	-	98	30.124	Monodelphis_domestica
ENSXCOG00000012940	-	90	30.460	ENSMODG00000029721	-	92	30.460	Monodelphis_domestica
ENSXCOG00000012940	-	82	30.000	ENSMODG00000029032	-	96	30.000	Monodelphis_domestica
ENSXCOG00000012940	-	87	31.657	ENSMODG00000028229	-	97	31.657	Monodelphis_domestica
ENSXCOG00000012940	-	64	32.618	ENSMPUG00000019478	-	52	32.618	Mustela_putorius_furo
ENSXCOG00000012940	-	99	31.053	ENSMPUG00000018497	-	92	31.053	Mustela_putorius_furo
ENSXCOG00000012940	-	74	37.282	ENSNBRG00000020944	-	86	37.282	Neolamprologus_brichardi
ENSXCOG00000012940	-	84	33.333	ENSNBRG00000010546	-	83	33.333	Neolamprologus_brichardi
ENSXCOG00000012940	-	73	34.615	ENSONIG00000021276	-	99	34.615	Oreochromis_niloticus
ENSXCOG00000012940	-	56	30.493	ENSOCUG00000029503	-	94	30.493	Oryctolagus_cuniculus
ENSXCOG00000012940	-	60	32.773	ENSORLG00015009902	-	83	32.773	Oryzias_latipes_hsok
ENSXCOG00000012940	-	98	42.246	ENSORLG00015008034	-	85	42.246	Oryzias_latipes_hsok
ENSXCOG00000012940	-	99	36.170	ENSOMEG00000005845	-	85	36.170	Oryzias_melastigma
ENSXCOG00000012940	-	72	30.175	ENSPLAG00000014958	-	83	30.175	Poecilia_latipinna
ENSXCOG00000012940	-	94	79.944	ENSPLAG00000019722	-	92	79.944	Poecilia_latipinna
ENSXCOG00000012940	-	99	81.283	ENSPMEG00000000053	-	96	81.283	Poecilia_mexicana
ENSXCOG00000012940	-	83	37.654	ENSPNYG00000002207	-	97	37.654	Pundamilia_nyererei
ENSXCOG00000012940	-	87	34.639	ENSPNAG00000016867	-	80	34.226	Pygocentrus_nattereri
ENSXCOG00000012940	-	98	39.831	ENSSDUG00000013762	-	86	39.831	Seriola_dumerili
ENSXCOG00000012940	-	86	32.934	ENSSDUG00000018238	-	94	32.934	Seriola_dumerili
ENSXCOG00000012940	-	98	33.871	ENSSPAG00000002492	-	98	33.871	Stegastes_partitus
ENSXCOG00000012940	-	98	31.117	ENSVVUG00000014466	-	54	31.117	Vulpes_vulpes
ENSXCOG00000012940	-	98	31.117	ENSVVUG00000006739	-	53	31.117	Vulpes_vulpes
ENSXCOG00000012940	-	98	30.851	ENSVVUG00000018154	-	56	30.851	Vulpes_vulpes
ENSXCOG00000012940	-	98	31.117	ENSVVUG00000019932	-	53	31.117	Vulpes_vulpes
ENSXCOG00000012940	-	97	33.784	ENSXETG00000031161	-	78	33.784	Xenopus_tropicalis
ENSXCOG00000012940	-	99	30.130	ENSXETG00000033835	-	93	30.130	Xenopus_tropicalis
ENSXCOG00000012940	-	98	31.830	ENSXETG00000030293	-	92	31.842	Xenopus_tropicalis
ENSXCOG00000012940	-	98	32.361	ENSXETG00000033205	-	85	32.275	Xenopus_tropicalis
ENSXCOG00000012940	-	97	30.376	ENSXETG00000034113	-	98	30.376	Xenopus_tropicalis
ENSXCOG00000012940	-	99	32.468	ENSXETG00000019951	-	97	32.468	Xenopus_tropicalis
ENSXCOG00000012940	-	99	31.771	ENSXETG00000034095	-	85	31.771	Xenopus_tropicalis
ENSXCOG00000012940	-	58	34.052	ENSXETG00000025636	-	99	34.335	Xenopus_tropicalis
ENSXCOG00000012940	-	99	31.565	ENSXETG00000031535	-	86	31.565	Xenopus_tropicalis
ENSXCOG00000012940	-	99	32.461	ENSXETG00000027781	-	98	32.124	Xenopus_tropicalis
ENSXCOG00000012940	-	99	31.316	ENSXETG00000031893	-	91	31.316	Xenopus_tropicalis
ENSXCOG00000012940	-	83	30.793	ENSXETG00000023159	-	97	30.625	Xenopus_tropicalis
ENSXCOG00000012940	-	98	32.361	ENSXETG00000031387	-	85	32.275	Xenopus_tropicalis
ENSXCOG00000012940	-	99	33.509	ENSXETG00000032834	-	94	33.509	Xenopus_tropicalis
ENSXCOG00000012940	-	99	30.607	ENSXETG00000030418	-	85	30.851	Xenopus_tropicalis
ENSXCOG00000012940	-	58	33.913	ENSXETG00000032255	-	99	33.913	Xenopus_tropicalis
ENSXCOG00000012940	-	98	30.239	ENSXETG00000030767	-	85	30.239	Xenopus_tropicalis
ENSXCOG00000012940	-	97	33.784	ENSXETG00000031237	-	78	33.784	Xenopus_tropicalis
ENSXCOG00000012940	-	98	32.095	ENSXETG00000031651	-	87	32.011	Xenopus_tropicalis
ENSXCOG00000012940	-	98	33.155	ENSXETG00000033336	-	77	33.155	Xenopus_tropicalis
ENSXCOG00000012940	-	97	30.376	ENSXETG00000002398	-	98	30.376	Xenopus_tropicalis
ENSXCOG00000012940	-	99	32.361	ENSXETG00000034064	-	86	32.361	Xenopus_tropicalis
ENSXCOG00000012940	-	99	30.159	ENSXETG00000031547	-	95	30.159	Xenopus_tropicalis
ENSXCOG00000012940	-	64	30.709	ENSXETG00000033892	-	90	30.041	Xenopus_tropicalis
ENSXCOG00000012940	-	97	31.452	ENSXETG00000010370	-	93	31.452	Xenopus_tropicalis
ENSXCOG00000012940	-	99	32.454	ENSXETG00000031025	-	94	32.454	Xenopus_tropicalis
ENSXCOG00000012940	-	99	31.152	ENSXETG00000031573	-	85	31.152	Xenopus_tropicalis
ENSXCOG00000012940	-	59	31.624	ENSXETG00000026017	-	100	31.624	Xenopus_tropicalis
ENSXCOG00000012940	-	98	32.095	ENSXETG00000031921	-	92	32.105	Xenopus_tropicalis
ENSXCOG00000012940	-	98	30.481	ENSXETG00000033299	-	90	30.481	Xenopus_tropicalis
ENSXCOG00000012940	-	99	30.670	ENSXETG00000033292	-	93	30.670	Xenopus_tropicalis
ENSXCOG00000012940	-	58	31.034	ENSXETG00000030935	-	99	31.034	Xenopus_tropicalis
ENSXCOG00000012940	-	97	30.108	ENSXETG00000031405	-	79	30.108	Xenopus_tropicalis
ENSXCOG00000012940	-	97	33.784	ENSXETG00000033118	-	78	33.784	Xenopus_tropicalis
ENSXCOG00000012940	-	98	33.777	ENSXETG00000033395	-	95	36.364	Xenopus_tropicalis
ENSXCOG00000012940	-	99	30.688	ENSXETG00000032876	-	95	30.688	Xenopus_tropicalis
ENSXCOG00000012940	-	99	32.812	ENSXETG00000033765	-	85	32.812	Xenopus_tropicalis
ENSXCOG00000012940	-	99	30.890	ENSXETG00000033763	-	92	30.311	Xenopus_tropicalis