EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000012997 (Gene tree)
Gene ID: -
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 50384 bases
Position: chrKQ557219.1:25832241-25882624
Accession: ZDB-GENE-030131-497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000017247	ResIII	PF04851.15	1.9e-06	1	1
ENSXCOP00000017247	BRK	PF07533.16	1.2e-32	1	2
ENSXCOP00000017247	BRK	PF07533.16	1.2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000017468	-	7377	-	ENSXCOP00000017247	2458 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000012997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000012997's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000012997	chd9	95	70.229	ENSG00000177200	CHD9	95	71.188	Homo_sapiens
ENSXCOG00000012997	chd9	99	89.544	ENSAPOG00000023034	chd9	99	88.979	Acanthochromis_polyacanthus
ENSXCOG00000012997	chd9	98	69.122	ENSAMEG00000016232	CHD9	79	71.562	Ailuropoda_melanoleuca
ENSXCOG00000012997	chd9	97	85.720	ENSACIG00000004097	chd9	81	85.762	Amphilophus_citrinellus
ENSXCOG00000012997	chd9	99	89.822	ENSAOCG00000005487	chd9	99	89.216	Amphiprion_ocellaris
ENSXCOG00000012997	chd9	99	89.782	ENSAPEG00000009859	chd9	99	89.176	Amphiprion_percula
ENSXCOG00000012997	chd9	99	88.060	ENSATEG00000002748	chd9	81	89.820	Anabas_testudineus
ENSXCOG00000012997	chd9	98	69.402	ENSAPLG00000002826	CHD9	56	77.289	Anas_platyrhynchos
ENSXCOG00000012997	chd9	67	75.698	ENSACAG00000016150	CHD9	78	71.313	Anolis_carolinensis
ENSXCOG00000012997	chd9	67	74.671	ENSANAG00000015630	CHD9	93	68.905	Aotus_nancymaae
ENSXCOG00000012997	chd9	99	87.143	ENSACLG00000016899	chd9	84	87.020	Astatotilapia_calliptera
ENSXCOG00000012997	chd9	99	75.989	ENSAMXG00000005652	chd9	97	78.148	Astyanax_mexicanus
ENSXCOG00000012997	chd9	98	68.543	ENSBTAG00000002287	CHD9	79	70.957	Bos_taurus
ENSXCOG00000012997	chd9	98	68.372	ENSCJAG00000001573	CHD9	93	69.258	Callithrix_jacchus
ENSXCOG00000012997	chd9	67	75.149	ENSCAFG00000009699	CHD9	79	71.835	Canis_familiaris
ENSXCOG00000012997	chd9	67	75.149	ENSCAFG00020002879	CHD9	91	69.965	Canis_lupus_dingo
ENSXCOG00000012997	chd9	95	70.059	ENSTSYG00000007693	CHD9	91	69.611	Carlito_syrichta
ENSXCOG00000012997	chd9	75	59.919	ENSCAPG00000011604	CHD9	59	62.606	Cavia_aperea
ENSXCOG00000012997	chd9	67	70.370	ENSCPOG00000036544	CHD9	78	67.933	Cavia_porcellus
ENSXCOG00000012997	chd9	67	74.895	ENSCCAG00000036178	CHD9	93	69.858	Cebus_capucinus
ENSXCOG00000012997	chd9	67	75.030	ENSCATG00000036753	CHD9	91	69.338	Cercocebus_atys
ENSXCOG00000012997	chd9	98	68.745	ENSCLAG00000007137	CHD9	94	81.840	Chinchilla_lanigera
ENSXCOG00000012997	chd9	67	74.970	ENSCSAG00000005311	CHD9	79	70.986	Chlorocebus_sabaeus
ENSXCOG00000012997	chd9	64	84.615	ENSCHOG00000003935	CHD9	53	91.361	Choloepus_hoffmanni
ENSXCOG00000012997	chd9	87	82.379	ENSCPBG00000012459	CHD9	76	81.865	Chrysemys_picta_bellii
ENSXCOG00000012997	chd9	67	74.970	ENSCANG00000030349	CHD9	91	69.965	Colobus_angolensis_palliatus
ENSXCOG00000012997	chd9	98	68.643	ENSCGRG00001016150	Chd9	79	70.744	Cricetulus_griseus_chok1gshd
ENSXCOG00000012997	chd9	98	68.643	ENSCGRG00000012850	Chd9	95	80.981	Cricetulus_griseus_crigri
ENSXCOG00000012997	chd9	99	84.812	ENSCSEG00000009209	chd9	99	83.199	Cynoglossus_semilaevis
ENSXCOG00000012997	chd9	97	92.349	ENSCVAG00000016195	chd9	83	91.894	Cyprinodon_variegatus
ENSXCOG00000012997	chd9	99	76.175	ENSDARG00000074498	chd9	97	77.025	Danio_rerio
ENSXCOG00000012997	chd9	95	69.461	ENSDNOG00000006045	CHD9	97	71.048	Dasypus_novemcinctus
ENSXCOG00000012997	chd9	82	69.463	ENSDORG00000008523	-	96	71.328	Dipodomys_ordii
ENSXCOG00000012997	chd9	86	92.063	ENSETEG00000009565	CHD9	71	92.063	Echinops_telfairi
ENSXCOG00000012997	chd9	98	67.231	ENSEASG00005014832	CHD9	94	80.221	Equus_asinus_asinus
ENSXCOG00000012997	chd9	67	75.089	ENSECAG00000011505	CHD9	80	71.055	Equus_caballus
ENSXCOG00000012997	chd9	75	87.665	ENSEEUG00000014515	CHD9	67	84.530	Erinaceus_europaeus
ENSXCOG00000012997	chd9	96	77.378	ENSELUG00000006031	chd9	97	77.522	Esox_lucius
ENSXCOG00000012997	chd9	98	68.975	ENSFCAG00000022534	CHD9	91	70.318	Felis_catus
ENSXCOG00000012997	chd9	98	69.327	ENSFALG00000013276	CHD9	95	71.682	Ficedula_albicollis
ENSXCOG00000012997	chd9	67	75.030	ENSFDAG00000021037	CHD9	80	70.633	Fukomys_damarensis
ENSXCOG00000012997	chd9	99	92.531	ENSFHEG00000006068	chd9	99	91.764	Fundulus_heteroclitus
ENSXCOG00000012997	chd9	80	86.957	ENSGMOG00000006040	chd9	84	86.608	Gadus_morhua
ENSXCOG00000012997	chd9	93	71.886	ENSGALG00000039178	CHD9	80	72.569	Gallus_gallus
ENSXCOG00000012997	chd9	99	96.553	ENSGAFG00000010014	chd9	99	96.553	Gambusia_affinis
ENSXCOG00000012997	chd9	67	74.910	ENSGGOG00000014816	CHD9	93	69.611	Gorilla_gorilla
ENSXCOG00000012997	chd9	99	86.923	ENSHBUG00000023322	chd9	99	86.869	Haplochromis_burtoni
ENSXCOG00000012997	chd9	97	69.269	ENSHGLG00000014938	CHD9	96	80.143	Heterocephalus_glaber_female
ENSXCOG00000012997	chd9	96	81.709	ENSHCOG00000000937	chd9	97	81.567	Hippocampus_comes
ENSXCOG00000012997	chd9	99	77.297	ENSIPUG00000016448	chd9	96	78.521	Ictalurus_punctatus
ENSXCOG00000012997	chd9	95	70.261	ENSSTOG00000022273	CHD9	94	81.576	Ictidomys_tridecemlineatus
ENSXCOG00000012997	chd9	51	77.857	ENSJJAG00000015741	-	96	70.880	Jaculus_jaculus
ENSXCOG00000012997	chd9	96	89.904	ENSKMAG00000016784	chd9	99	88.705	Kryptolebias_marmoratus
ENSXCOG00000012997	chd9	96	88.640	ENSLBEG00000012077	chd9	96	88.391	Labrus_bergylta
ENSXCOG00000012997	chd9	95	66.324	ENSLACG00000005557	CHD9	79	67.131	Latimeria_chalumnae
ENSXCOG00000012997	chd9	99	75.130	ENSLOCG00000007225	chd9	97	75.956	Lepisosteus_oculatus
ENSXCOG00000012997	chd9	67	74.806	ENSLAFG00000015374	CHD9	80	70.388	Loxodonta_africana
ENSXCOG00000012997	chd9	94	70.161	ENSMFAG00000041354	CHD9	94	71.273	Macaca_fascicularis
ENSXCOG00000012997	chd9	67	75.030	ENSMMUG00000016310	CHD9	91	69.965	Macaca_mulatta
ENSXCOG00000012997	chd9	86	71.858	ENSMNEG00000031494	CHD9	80	72.898	Macaca_nemestrina
ENSXCOG00000012997	chd9	67	75.030	ENSMLEG00000043219	CHD9	91	69.965	Mandrillus_leucophaeus
ENSXCOG00000012997	chd9	99	88.019	ENSMAMG00000003909	chd9	80	88.751	Mastacembelus_armatus
ENSXCOG00000012997	chd9	99	88.034	ENSMZEG00005006581	chd9	99	87.671	Maylandia_zebra
ENSXCOG00000012997	chd9	98	64.900	ENSMGAG00000004642	CHD9	59	72.495	Meleagris_gallopavo
ENSXCOG00000012997	chd9	98	69.015	ENSMICG00000016679	CHD9	91	70.318	Microcebus_murinus
ENSXCOG00000012997	chd9	97	85.786	ENSMMOG00000016406	chd9	81	86.917	Mola_mola
ENSXCOG00000012997	chd9	86	75.670	ENSMODG00000013142	-	96	77.509	Monodelphis_domestica
ENSXCOG00000012997	chd9	97	86.899	ENSMALG00000013306	chd9	82	87.023	Monopterus_albus
ENSXCOG00000012997	chd9	95	69.578	MGP_CAROLIEiJ_G0031364	Chd9	79	70.313	Mus_caroli
ENSXCOG00000012997	chd9	95	69.873	ENSMUSG00000056608	Chd9	95	80.406	Mus_musculus
ENSXCOG00000012997	chd9	95	68.629	MGP_PahariEiJ_G0022964	Chd9	79	69.504	Mus_pahari
ENSXCOG00000012997	chd9	95	69.789	MGP_SPRETEiJ_G0032483	Chd9	79	70.429	Mus_spretus
ENSXCOG00000012997	chd9	67	75.209	ENSMPUG00000003285	CHD9	79	71.580	Mustela_putorius_furo
ENSXCOG00000012997	chd9	67	74.851	ENSMLUG00000004456	CHD9	79	70.571	Myotis_lucifugus
ENSXCOG00000012997	chd9	99	87.956	ENSNBRG00000009423	chd9	99	87.304	Neolamprologus_brichardi
ENSXCOG00000012997	chd9	85	71.918	ENSNLEG00000001026	CHD9	80	73.070	Nomascus_leucogenys
ENSXCOG00000012997	chd9	72	93.985	ENSMEUG00000008222	-	69	91.083	Notamacropus_eugenii
ENSXCOG00000012997	chd9	67	74.836	ENSODEG00000004466	CHD9	79	70.803	Octodon_degus
ENSXCOG00000012997	chd9	97	88.097	ENSONIG00000002816	chd9	98	87.603	Oreochromis_niloticus
ENSXCOG00000012997	chd9	67	75.803	ENSOANG00000013401	CHD9	79	71.852	Ornithorhynchus_anatinus
ENSXCOG00000012997	chd9	98	68.922	ENSOCUG00000001016	CHD9	94	71.271	Oryctolagus_cuniculus
ENSXCOG00000012997	chd9	96	87.495	ENSORLG00000013810	chd9	96	86.213	Oryzias_latipes
ENSXCOG00000012997	chd9	97	84.846	ENSORLG00020020665	chd9	80	85.973	Oryzias_latipes_hni
ENSXCOG00000012997	chd9	96	87.469	ENSORLG00015019126	chd9	96	87.495	Oryzias_latipes_hsok
ENSXCOG00000012997	chd9	55	91.368	ENSOMEG00000015978	chd9	73	91.222	Oryzias_melastigma
ENSXCOG00000012997	chd9	98	68.679	ENSOGAG00000002110	CHD9	79	70.955	Otolemur_garnettii
ENSXCOG00000012997	chd9	67	74.597	ENSOARG00000017664	CHD9	79	70.867	Ovis_aries
ENSXCOG00000012997	chd9	95	69.221	ENSPPAG00000039388	-	96	70.093	Pan_paniscus
ENSXCOG00000012997	chd9	98	69.016	ENSPPRG00000004801	CHD9	91	69.965	Panthera_pardus
ENSXCOG00000012997	chd9	95	69.389	ENSPTIG00000021854	CHD9	91	61.131	Panthera_tigris_altaica
ENSXCOG00000012997	chd9	67	75.030	ENSPTRG00000008113	CHD9	93	69.611	Pan_troglodytes
ENSXCOG00000012997	chd9	98	68.773	ENSPANG00000019307	CHD9	95	71.113	Papio_anubis
ENSXCOG00000012997	chd9	98	70.434	ENSPKIG00000025401	-	81	70.973	Paramormyrops_kingsleyae
ENSXCOG00000012997	chd9	97	76.521	ENSPKIG00000021876	chd9	96	77.861	Paramormyrops_kingsleyae
ENSXCOG00000012997	chd9	56	77.178	ENSPSIG00000008099	CHD9	71	78.698	Pelodiscus_sinensis
ENSXCOG00000012997	chd9	84	72.082	ENSPCIG00000017215	CHD9	97	73.395	Phascolarctos_cinereus
ENSXCOG00000012997	chd9	99	96.794	ENSPFOG00000015839	chd9	83	96.794	Poecilia_formosa
ENSXCOG00000012997	chd9	99	98.062	ENSPLAG00000011118	chd9	99	98.062	Poecilia_latipinna
ENSXCOG00000012997	chd9	99	96.265	ENSPMEG00000015106	chd9	83	96.265	Poecilia_mexicana
ENSXCOG00000012997	chd9	99	97.075	ENSPREG00000006473	chd9	99	96.433	Poecilia_reticulata
ENSXCOG00000012997	chd9	67	74.910	ENSPPYG00000007348	CHD9	80	70.898	Pongo_abelii
ENSXCOG00000012997	chd9	68	79.819	ENSPCAG00000007564	CHD9	68	82.298	Procavia_capensis
ENSXCOG00000012997	chd9	67	72.521	ENSPCOG00000028433	CHD9	91	69.258	Propithecus_coquereli
ENSXCOG00000012997	chd9	95	72.438	ENSPVAG00000015617	CHD9	76	74.142	Pteropus_vampyrus
ENSXCOG00000012997	chd9	99	87.832	ENSPNYG00000010947	chd9	99	86.946	Pundamilia_nyererei
ENSXCOG00000012997	chd9	96	77.993	ENSPNAG00000024141	chd9	97	77.632	Pygocentrus_nattereri
ENSXCOG00000012997	chd9	86	68.334	ENSRNOG00000049302	Chd9	94	56.804	Rattus_norvegicus
ENSXCOG00000012997	chd9	98	68.773	ENSRBIG00000035553	CHD9	95	71.113	Rhinopithecus_bieti
ENSXCOG00000012997	chd9	97	69.651	ENSRROG00000033278	CHD9	96	71.155	Rhinopithecus_roxellana
ENSXCOG00000012997	chd9	95	69.829	ENSSBOG00000030240	CHD9	93	69.258	Saimiri_boliviensis_boliviensis
ENSXCOG00000012997	chd9	98	68.876	ENSSHAG00000002719	CHD9	79	71.235	Sarcophilus_harrisii
ENSXCOG00000012997	chd9	96	77.977	ENSSFOG00015020209	chd9	97	77.606	Scleropages_formosus
ENSXCOG00000012997	chd9	98	73.247	ENSSFOG00015001327	chd9	96	74.160	Scleropages_formosus
ENSXCOG00000012997	chd9	96	89.022	ENSSMAG00000008953	chd9	96	88.898	Scophthalmus_maximus
ENSXCOG00000012997	chd9	99	88.615	ENSSDUG00000006139	chd9	99	88.212	Seriola_dumerili
ENSXCOG00000012997	chd9	99	89.225	ENSSLDG00000017818	chd9	99	88.822	Seriola_lalandi_dorsalis
ENSXCOG00000012997	chd9	64	77.759	ENSSARG00000010632	CHD9	53	77.880	Sorex_araneus
ENSXCOG00000012997	chd9	99	89.382	ENSSPAG00000021649	chd9	99	88.898	Stegastes_partitus
ENSXCOG00000012997	chd9	86	72.719	ENSTGUG00000007476	CHD9	80	73.534	Taeniopygia_guttata
ENSXCOG00000012997	chd9	99	85.516	ENSTRUG00000009125	chd9	83	84.814	Takifugu_rubripes
ENSXCOG00000012997	chd9	76	69.676	ENSTNIG00000003825	chd9	87	86.603	Tetraodon_nigroviridis
ENSXCOG00000012997	chd9	61	94.915	ENSTBEG00000016052	-	63	94.915	Tupaia_belangeri
ENSXCOG00000012997	chd9	84	71.691	ENSTTRG00000012674	CHD9	72	71.778	Tursiops_truncatus
ENSXCOG00000012997	chd9	76	67.332	ENSUAMG00000022706	CHD9	95	69.298	Ursus_americanus
ENSXCOG00000012997	chd9	75	86.373	ENSUMAG00000004043	CHD9	92	86.373	Ursus_maritimus
ENSXCOG00000012997	chd9	64	76.024	ENSVPAG00000001374	CHD9	77	70.270	Vicugna_pacos
ENSXCOG00000012997	chd9	67	75.090	ENSVVUG00000019435	CHD9	79	71.793	Vulpes_vulpes
ENSXCOG00000012997	chd9	93	69.410	ENSXETG00000000349	chd9	77	76.071	Xenopus_tropicalis
ENSXCOG00000012997	chd9	99	97.997	ENSXMAG00000016192	chd9	100	97.995	Xiphophorus_maculatus