EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000013058 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 2783 bases
Position: chrKQ557225.1:54333086-54335868
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000017326	Gar1	PF04410.14	1.6e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000017547	-	903	-	ENSXCOP00000017326	300 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013058's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013058	-	92	39.815	ENSG00000145414	NAF1	95	62.500	Homo_sapiens
ENSXCOG00000013058	-	68	63.043	ENSAPOG00000007663	-	71	55.340	Acanthochromis_polyacanthus
ENSXCOG00000013058	-	92	57.807	ENSAOCG00000003518	-	72	55.987	Amphiprion_ocellaris
ENSXCOG00000013058	-	68	63.913	ENSAPEG00000004453	-	71	56.634	Amphiprion_percula
ENSXCOG00000013058	-	91	57.860	ENSATEG00000003514	-	55	59.197	Anabas_testudineus
ENSXCOG00000013058	-	84	37.597	ENSAPLG00000003210	NAF1	50	44.633	Anas_platyrhynchos
ENSXCOG00000013058	-	80	41.045	ENSANAG00000025253	NAF1	93	62.500	Aotus_nancymaae
ENSXCOG00000013058	-	91	58.863	ENSACLG00000017092	-	69	58.966	Astatotilapia_calliptera
ENSXCOG00000013058	-	64	48.223	ENSCJAG00000012406	NAF1	100	61.905	Callithrix_jacchus
ENSXCOG00000013058	-	63	48.421	ENSTSYG00000005946	NAF1	91	58.974	Carlito_syrichta
ENSXCOG00000013058	-	59	51.124	ENSCCAG00000030023	NAF1	95	62.500	Cebus_capucinus
ENSXCOG00000013058	-	64	48.223	ENSCATG00000022663	NAF1	95	62.500	Cercocebus_atys
ENSXCOG00000013058	-	64	48.223	ENSCANG00000039151	NAF1	95	62.500	Colobus_angolensis_palliatus
ENSXCOG00000013058	-	88	45.201	ENSCSEG00000010914	-	54	51.351	Cynoglossus_semilaevis
ENSXCOG00000013058	-	91	74.182	ENSCVAG00000003483	-	89	73.091	Cyprinodon_variegatus
ENSXCOG00000013058	-	76	72.951	ENSFHEG00000015835	-	63	70.990	Fundulus_heteroclitus
ENSXCOG00000013058	-	91	86.897	ENSGAFG00000017883	-	58	87.586	Gambusia_affinis
ENSXCOG00000013058	-	92	39.329	ENSGGOG00000000894	NAF1	95	62.500	Gorilla_gorilla
ENSXCOG00000013058	-	51	77.922	ENSHBUG00000002404	-	51	77.922	Haplochromis_burtoni
ENSXCOG00000013058	-	72	52.500	ENSHCOG00000001581	-	64	53.061	Hippocampus_comes
ENSXCOG00000013058	-	88	57.483	ENSKMAG00000005434	-	52	60.159	Kryptolebias_marmoratus
ENSXCOG00000013058	-	73	58.431	ENSLBEG00000020414	-	58	58.333	Labrus_bergylta
ENSXCOG00000013058	-	59	49.438	ENSLAFG00000009193	-	55	49.438	Loxodonta_africana
ENSXCOG00000013058	-	64	48.223	ENSMFAG00000040952	NAF1	95	62.500	Macaca_fascicularis
ENSXCOG00000013058	-	64	48.223	ENSMMUG00000001717	NAF1	95	62.500	Macaca_mulatta
ENSXCOG00000013058	-	64	48.223	ENSMNEG00000032677	NAF1	95	62.500	Macaca_nemestrina
ENSXCOG00000013058	-	64	48.223	ENSMLEG00000035330	NAF1	95	62.500	Mandrillus_leucophaeus
ENSXCOG00000013058	-	53	81.132	ENSMAMG00000003269	-	76	62.000	Mastacembelus_armatus
ENSXCOG00000013058	-	91	59.259	ENSMZEG00005005830	-	71	57.586	Maylandia_zebra
ENSXCOG00000013058	-	61	47.826	ENSMGAG00000002133	NAF1	60	47.179	Meleagris_gallopavo
ENSXCOG00000013058	-	51	54.430	ENSMICG00000038661	NAF1	84	61.111	Microcebus_murinus
ENSXCOG00000013058	-	68	57.143	ENSMMOG00000016895	-	57	48.763	Mola_mola
ENSXCOG00000013058	-	68	63.636	ENSMALG00000018482	-	52	61.847	Monopterus_albus
ENSXCOG00000013058	-	64	48.223	ENSNLEG00000006459	-	95	62.500	Nomascus_leucogenys
ENSXCOG00000013058	-	74	60.082	ENSONIG00000001826	-	83	57.931	Oreochromis_niloticus
ENSXCOG00000013058	-	60	49.444	ENSOANG00000014157	-	50	47.059	Ornithorhynchus_anatinus
ENSXCOG00000013058	-	92	39.329	ENSPPAG00000034674	NAF1	95	62.500	Pan_paniscus
ENSXCOG00000013058	-	92	39.329	ENSPTRG00000016560	NAF1	95	62.500	Pan_troglodytes
ENSXCOG00000013058	-	64	48.223	ENSPANG00000015574	NAF1	95	62.500	Papio_anubis
ENSXCOG00000013058	-	91	84.300	ENSPFOG00000010705	-	85	77.492	Poecilia_formosa
ENSXCOG00000013058	-	91	84.642	ENSPLAG00000002200	-	61	82.935	Poecilia_latipinna
ENSXCOG00000013058	-	91	81.229	ENSPMEG00000004437	-	61	81.570	Poecilia_mexicana
ENSXCOG00000013058	-	91	80.546	ENSPREG00000022551	-	61	80.887	Poecilia_reticulata
ENSXCOG00000013058	-	56	52.096	ENSPVAG00000016222	NAF1	50	39.526	Pteropus_vampyrus
ENSXCOG00000013058	-	91	57.746	ENSPNYG00000021456	-	51	77.215	Pundamilia_nyererei
ENSXCOG00000013058	-	64	48.731	ENSRBIG00000030027	NAF1	95	62.500	Rhinopithecus_bieti
ENSXCOG00000013058	-	64	48.731	ENSRROG00000040912	NAF1	95	62.500	Rhinopithecus_roxellana
ENSXCOG00000013058	-	64	48.223	ENSSBOG00000002085	NAF1	95	65.000	Saimiri_boliviensis_boliviensis
ENSXCOG00000013058	-	66	60.262	ENSSMAG00000015529	-	64	58.238	Scophthalmus_maximus
ENSXCOG00000013058	-	72	63.265	ENSSDUG00000005987	-	62	62.205	Seriola_dumerili
ENSXCOG00000013058	-	72	56.589	ENSSLDG00000019761	-	57	57.471	Seriola_lalandi_dorsalis
ENSXCOG00000013058	-	50	55.629	ENSSPUG00000004087	NAF1	52	55.629	Sphenodon_punctatus
ENSXCOG00000013058	-	59	46.023	ENSTGUG00000005798	NAF1	92	46.023	Taeniopygia_guttata
ENSXCOG00000013058	-	88	56.140	ENSTRUG00000011908	-	75	49.669	Takifugu_rubripes
ENSXCOG00000013058	-	60	47.849	ENSVPAG00000007182	-	71	47.849	Vicugna_pacos
ENSXCOG00000013058	-	91	90.690	ENSXMAG00000011494	-	60	90.345	Xiphophorus_maculatus