EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000013093 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 3537 bases
Position: chrKQ557225.1:54555202-54558738
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000017370	RVT_1	PF00078.27	2.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000017591	-	3423	-	ENSXCOP00000017370	1140 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013093's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000013093	-	74	40.595	ENSXCOG00000008881	-	93	40.595

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013093	-	79	42.803	ENSACIG00000007038	-	91	36.688	Amphilophus_citrinellus
ENSXCOG00000013093	-	80	38.471	ENSACIG00000012161	-	82	38.471	Amphilophus_citrinellus
ENSXCOG00000013093	-	71	42.105	ENSACIG00000009025	-	91	42.105	Amphilophus_citrinellus
ENSXCOG00000013093	-	71	41.451	ENSACIG00000013116	-	80	41.451	Amphilophus_citrinellus
ENSXCOG00000013093	-	92	36.064	ENSACIG00000010787	-	94	36.064	Amphilophus_citrinellus
ENSXCOG00000013093	-	92	46.555	ENSAMXG00000042811	-	91	46.555	Astyanax_mexicanus
ENSXCOG00000013093	-	93	48.350	ENSCPBG00000003842	-	85	48.350	Chrysemys_picta_bellii
ENSXCOG00000013093	-	93	33.927	ENSCVAG00000004138	-	98	33.927	Cyprinodon_variegatus
ENSXCOG00000013093	-	75	42.987	ENSELUG00000004597	-	89	43.330	Esox_lucius
ENSXCOG00000013093	-	84	43.218	ENSELUG00000004618	-	86	43.168	Esox_lucius
ENSXCOG00000013093	-	88	34.650	ENSFHEG00000007211	-	95	33.774	Fundulus_heteroclitus
ENSXCOG00000013093	-	92	32.099	ENSFHEG00000002865	-	88	32.099	Fundulus_heteroclitus
ENSXCOG00000013093	-	72	39.099	ENSFHEG00000002853	-	76	39.099	Fundulus_heteroclitus
ENSXCOG00000013093	-	91	36.651	ENSFHEG00000022106	-	94	36.746	Fundulus_heteroclitus
ENSXCOG00000013093	-	51	41.468	ENSGMOG00000005227	-	99	41.468	Gadus_morhua
ENSXCOG00000013093	-	92	36.877	ENSHCOG00000007389	-	94	36.877	Hippocampus_comes
ENSXCOG00000013093	-	92	38.266	ENSHCOG00000007397	-	92	38.266	Hippocampus_comes
ENSXCOG00000013093	-	84	42.353	ENSHCOG00000007436	-	95	42.353	Hippocampus_comes
ENSXCOG00000013093	-	93	37.569	ENSHCOG00000000471	-	91	37.569	Hippocampus_comes
ENSXCOG00000013093	-	58	40.996	ENSLBEG00000006732	-	80	39.927	Labrus_bergylta
ENSXCOG00000013093	-	59	40.996	ENSLBEG00000004576	-	81	40.996	Labrus_bergylta
ENSXCOG00000013093	-	64	43.258	ENSLBEG00000003745	-	88	43.258	Labrus_bergylta
ENSXCOG00000013093	-	67	38.089	ENSLACG00000006357	-	96	38.089	Latimeria_chalumnae
ENSXCOG00000013093	-	51	38.776	ENSLACG00000009240	-	100	38.776	Latimeria_chalumnae
ENSXCOG00000013093	-	93	46.260	ENSLOCG00000011928	-	100	46.260	Lepisosteus_oculatus
ENSXCOG00000013093	-	95	46.761	ENSLOCG00000017064	-	99	46.761	Lepisosteus_oculatus
ENSXCOG00000013093	-	79	42.303	ENSMAMG00000019985	-	76	42.424	Mastacembelus_armatus
ENSXCOG00000013093	-	92	38.375	ENSONIG00000020875	-	88	38.375	Oreochromis_niloticus
ENSXCOG00000013093	-	91	33.114	ENSOMEG00000015368	-	98	33.302	Oryzias_melastigma
ENSXCOG00000013093	-	71	38.177	ENSPMGG00000017392	-	86	38.177	Periophthalmus_magnuspinnatus
ENSXCOG00000013093	-	54	39.516	ENSPMGG00000001593	-	63	39.516	Periophthalmus_magnuspinnatus
ENSXCOG00000013093	-	93	37.092	ENSPLAG00000022994	-	96	37.092	Poecilia_latipinna
ENSXCOG00000013093	-	91	35.029	ENSPLAG00000011817	-	99	35.029	Poecilia_latipinna
ENSXCOG00000013093	-	92	37.335	ENSPLAG00000011810	-	94	37.335	Poecilia_latipinna
ENSXCOG00000013093	-	71	40.594	ENSPLAG00000023379	-	97	40.594	Poecilia_latipinna
ENSXCOG00000013093	-	95	35.570	ENSPMEG00000003431	-	98	35.570	Poecilia_mexicana
ENSXCOG00000013093	-	92	33.932	ENSPMEG00000008574	-	95	33.932	Poecilia_mexicana
ENSXCOG00000013093	-	79	39.851	ENSPREG00000012484	-	81	39.851	Poecilia_reticulata
ENSXCOG00000013093	-	78	40.704	ENSPREG00000005756	-	82	40.704	Poecilia_reticulata
ENSXCOG00000013093	-	92	35.795	ENSPREG00000005456	-	88	35.795	Poecilia_reticulata
ENSXCOG00000013093	-	93	41.582	ENSPNAG00000016635	-	90	41.582	Pygocentrus_nattereri
ENSXCOG00000013093	-	87	42.975	ENSPNAG00000014625	-	90	42.975	Pygocentrus_nattereri
ENSXCOG00000013093	-	92	40.880	ENSPNAG00000007038	-	91	41.063	Pygocentrus_nattereri
ENSXCOG00000013093	-	92	41.802	ENSPNAG00000003539	-	90	41.802	Pygocentrus_nattereri
ENSXCOG00000013093	-	71	46.646	ENSPNAG00000017596	-	86	46.646	Pygocentrus_nattereri
ENSXCOG00000013093	-	91	41.100	ENSPNAG00000021754	-	89	41.100	Pygocentrus_nattereri
ENSXCOG00000013093	-	84	39.085	ENSXMAG00000028672	-	88	39.085	Xiphophorus_maculatus