EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000013140 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 7666 bases
Position: chrKQ557206.1:23822806-23830471
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000017426	MTS	PF05175.14	1.2e-06	1	1
ENSXCOP00000017426	Bin3	PF06859.12	2.3e-28	1	1
ENSXCOP00000017426	Methyltransf_31	PF13847.6	6.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000017648	-	1611	-	ENSXCOP00000017426	536 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013140's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000013140	-	94	39.693	ENSXCOG00000007070	mepce	97	38.191

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013140	-	71	44.910	ENSG00000146834	MEPCE	98	40.465	Homo_sapiens
ENSXCOG00000013140	-	83	57.143	ENSAPOG00000009313	-	96	54.717	Acanthochromis_polyacanthus
ENSXCOG00000013140	-	50	56.962	ENSAPOG00000010701	-	97	55.060	Acanthochromis_polyacanthus
ENSXCOG00000013140	-	92	38.055	ENSAMEG00000015035	MEPCE	68	50.568	Ailuropoda_melanoleuca
ENSXCOG00000013140	-	87	41.746	ENSACIG00000012358	mepce	83	41.879	Amphilophus_citrinellus
ENSXCOG00000013140	-	87	61.303	ENSAOCG00000018483	-	97	60.741	Amphiprion_ocellaris
ENSXCOG00000013140	-	87	61.610	ENSAOCG00000018539	si:ch1073-157b13.1	97	61.481	Amphiprion_ocellaris
ENSXCOG00000013140	-	95	62.585	ENSAPEG00000021439	-	97	63.265	Amphiprion_percula
ENSXCOG00000013140	-	95	74.375	ENSATEG00000018752	si:ch1073-157b13.1	87	75.000	Anabas_testudineus
ENSXCOG00000013140	-	64	63.393	ENSATEG00000016877	mepce	54	63.780	Anabas_testudineus
ENSXCOG00000013140	-	95	72.500	ENSATEG00000001673	-	87	73.125	Anabas_testudineus
ENSXCOG00000013140	-	76	43.320	ENSACAG00000011551	MEPCE	82	35.009	Anolis_carolinensis
ENSXCOG00000013140	-	71	45.181	ENSANAG00000035127	MEPCE	63	49.153	Aotus_nancymaae
ENSXCOG00000013140	-	95	56.628	ENSACLG00000021966	-	97	59.543	Astatotilapia_calliptera
ENSXCOG00000013140	-	65	62.602	ENSACLG00000017089	mepce	51	63.780	Astatotilapia_calliptera
ENSXCOG00000013140	-	87	51.852	ENSAMXG00000033849	si:ch1073-157b13.1	77	51.852	Astyanax_mexicanus
ENSXCOG00000013140	-	84	38.889	ENSCJAG00000015348	MEPCE	63	49.153	Callithrix_jacchus
ENSXCOG00000013140	-	85	38.388	ENSCHIG00000008713	MEPCE	84	39.298	Capra_hircus
ENSXCOG00000013140	-	71	47.904	ENSCCAG00000028766	MEPCE	63	50.282	Cebus_capucinus
ENSXCOG00000013140	-	84	38.343	ENSCATG00000027605	MEPCE	68	47.032	Cercocebus_atys
ENSXCOG00000013140	-	71	47.904	ENSCSAG00000017894	MEPCE	67	45.622	Chlorocebus_sabaeus
ENSXCOG00000013140	-	84	38.123	ENSCANG00000030898	MEPCE	98	40.000	Colobus_angolensis_palliatus
ENSXCOG00000013140	-	99	54.226	ENSCSEG00000005838	-	99	54.808	Cynoglossus_semilaevis
ENSXCOG00000013140	-	85	47.205	ENSCVAG00000023449	mepce	57	55.215	Cyprinodon_variegatus
ENSXCOG00000013140	-	95	71.942	ENSCVAG00000001392	si:ch1073-157b13.1	97	71.583	Cyprinodon_variegatus
ENSXCOG00000013140	-	85	46.108	ENSDARG00000059461	mepce	51	65.625	Danio_rerio
ENSXCOG00000013140	-	88	44.809	ENSDARG00000035771	MEPCE	90	43.234	Danio_rerio
ENSXCOG00000013140	-	78	43.662	ENSDORG00000005311	Mepce	91	65.517	Dipodomys_ordii
ENSXCOG00000013140	-	65	36.641	ENSEBUG00000003854	-	59	37.069	Eptatretus_burgeri
ENSXCOG00000013140	-	54	69.118	ENSEBUG00000002563	MEPCE	67	54.783	Eptatretus_burgeri
ENSXCOG00000013140	-	61	65.421	ENSELUG00000018561	mepce	57	59.211	Esox_lucius
ENSXCOG00000013140	-	85	37.905	ENSFDAG00000001651	MEPCE	93	39.326	Fukomys_damarensis
ENSXCOG00000013140	-	65	62.602	ENSFHEG00000014422	mepce	51	63.492	Fundulus_heteroclitus
ENSXCOG00000013140	-	53	45.338	ENSGMOG00000000837	-	94	45.338	Gadus_morhua
ENSXCOG00000013140	-	58	65.263	ENSGALG00000048263	MEPCE	50	66.019	Gallus_gallus
ENSXCOG00000013140	-	94	49.091	ENSGAFG00000003547	mepce	82	49.091	Gambusia_affinis
ENSXCOG00000013140	-	92	84.895	ENSGAFG00000020426	si:ch1073-157b13.1	98	85.277	Gambusia_affinis
ENSXCOG00000013140	-	56	60.661	ENSGACG00000001158	-	94	61.661	Gasterosteus_aculeatus
ENSXCOG00000013140	-	71	47.904	ENSGGOG00000005371	MEPCE	98	40.465	Gorilla_gorilla
ENSXCOG00000013140	-	65	62.602	ENSHBUG00000022377	mepce	51	63.780	Haplochromis_burtoni
ENSXCOG00000013140	-	84	38.123	ENSHGLG00100016274	MEPCE	87	39.509	Heterocephalus_glaber_male
ENSXCOG00000013140	-	84	40.404	ENSHCOG00000001737	mepce	77	38.833	Hippocampus_comes
ENSXCOG00000013140	-	85	59.355	ENSHCOG00000009246	-	95	57.576	Hippocampus_comes
ENSXCOG00000013140	-	87	46.468	ENSIPUG00000003387	si:ch1073-157b13.1	81	46.654	Ictalurus_punctatus
ENSXCOG00000013140	-	65	66.102	ENSIPUG00000021852	mepce	85	43.939	Ictalurus_punctatus
ENSXCOG00000013140	-	78	44.545	ENSSTOG00000007568	MEPCE	69	46.364	Ictidomys_tridecemlineatus
ENSXCOG00000013140	-	79	46.977	ENSJJAG00000010924	Mepce	88	39.576	Jaculus_jaculus
ENSXCOG00000013140	-	95	65.577	ENSKMAG00000007072	-	97	63.778	Kryptolebias_marmoratus
ENSXCOG00000013140	-	84	49.068	ENSLBEG00000002932	mepce	72	49.068	Labrus_bergylta
ENSXCOG00000013140	-	68	62.308	ENSLACG00000012355	MEPCE	98	51.366	Latimeria_chalumnae
ENSXCOG00000013140	-	71	46.784	ENSLAFG00000012347	MEPCE	64	48.901	Loxodonta_africana
ENSXCOG00000013140	-	70	47.904	ENSMFAG00000003007	MEPCE	68	47.032	Macaca_fascicularis
ENSXCOG00000013140	-	70	47.904	ENSMMUG00000012724	MEPCE	68	47.032	Macaca_mulatta
ENSXCOG00000013140	-	70	47.904	ENSMNEG00000038460	MEPCE	68	47.032	Macaca_nemestrina
ENSXCOG00000013140	-	71	43.931	ENSMLEG00000043318	MEPCE	98	40.465	Mandrillus_leucophaeus
ENSXCOG00000013140	-	94	75.625	ENSMAMG00000011139	si:ch1073-157b13.1	84	75.000	Mastacembelus_armatus
ENSXCOG00000013140	-	62	68.571	ENSMAMG00000017139	mepce	99	43.243	Mastacembelus_armatus
ENSXCOG00000013140	-	95	56.628	ENSMZEG00005022148	-	97	59.543	Maylandia_zebra
ENSXCOG00000013140	-	65	62.602	ENSMZEG00005016927	mepce	51	63.780	Maylandia_zebra
ENSXCOG00000013140	-	71	46.707	ENSMICG00000030166	MEPCE	70	45.339	Microcebus_murinus
ENSXCOG00000013140	-	71	51.515	ENSMOCG00000015013	Mepce	64	51.744	Microtus_ochrogaster
ENSXCOG00000013140	-	88	60.935	ENSMMOG00000011072	-	94	60.364	Mola_mola
ENSXCOG00000013140	-	61	73.118	ENSMMOG00000016706	mepce	55	73.832	Mola_mola
ENSXCOG00000013140	-	92	39.649	ENSMODG00000004457	MEPCE	65	50.526	Monodelphis_domestica
ENSXCOG00000013140	-	95	57.552	ENSMALG00000004684	si:ch1073-157b13.1	97	55.591	Monopterus_albus
ENSXCOG00000013140	-	78	45.662	MGP_CAROLIEiJ_G0027892	Mepce	91	62.069	Mus_caroli
ENSXCOG00000013140	-	78	44.240	ENSMUSG00000029726	Mepce	91	62.069	Mus_musculus
ENSXCOG00000013140	-	78	46.262	MGP_SPRETEiJ_G0028897	Mepce	91	62.069	Mus_spretus
ENSXCOG00000013140	-	71	47.953	ENSMPUG00000015673	MEPCE	62	50.000	Mustela_putorius_furo
ENSXCOG00000013140	-	94	56.661	ENSNBRG00000006332	-	95	57.941	Neolamprologus_brichardi
ENSXCOG00000013140	-	71	47.590	ENSODEG00000016662	MEPCE	65	52.023	Octodon_degus
ENSXCOG00000013140	-	93	55.862	ENSONIG00000009135	-	100	57.045	Oreochromis_niloticus
ENSXCOG00000013140	-	84	41.825	ENSONIG00000005231	mepce	99	40.426	Oreochromis_niloticus
ENSXCOG00000013140	-	71	44.382	ENSOCUG00000029324	MEPCE	79	39.518	Oryctolagus_cuniculus
ENSXCOG00000013140	-	66	58.462	ENSORLG00000027617	mepce	50	65.354	Oryzias_latipes
ENSXCOG00000013140	-	69	52.667	ENSORLG00020005817	mepce	50	65.354	Oryzias_latipes_hni
ENSXCOG00000013140	-	69	52.667	ENSORLG00015011129	mepce	50	65.354	Oryzias_latipes_hsok
ENSXCOG00000013140	-	64	63.934	ENSOMEG00000002027	mepce	51	64.567	Oryzias_melastigma
ENSXCOG00000013140	-	95	61.713	ENSOMEG00000007393	si:ch1073-157b13.1	97	62.063	Oryzias_melastigma
ENSXCOG00000013140	-	85	38.506	ENSOARG00000016948	MEPCE	79	39.775	Ovis_aries
ENSXCOG00000013140	-	71	45.181	ENSPPAG00000031579	MEPCE	62	49.153	Pan_paniscus
ENSXCOG00000013140	-	84	39.544	ENSPPRG00000002350	MEPCE	98	40.930	Panthera_pardus
ENSXCOG00000013140	-	71	45.181	ENSPTRG00000050679	-	62	49.153	Pan_troglodytes
ENSXCOG00000013140	-	71	45.181	ENSPTRG00000019487	MEPCE	62	49.153	Pan_troglodytes
ENSXCOG00000013140	-	70	47.904	ENSPANG00000022874	MEPCE	68	47.032	Papio_anubis
ENSXCOG00000013140	-	91	39.082	ENSPKIG00000021740	MEPCE	88	38.608	Paramormyrops_kingsleyae
ENSXCOG00000013140	-	90	40.406	ENSPSIG00000007183	MEPCE	87	40.987	Pelodiscus_sinensis
ENSXCOG00000013140	-	87	41.636	ENSPMGG00000008592	mepce	84	40.000	Periophthalmus_magnuspinnatus
ENSXCOG00000013140	-	62	53.457	ENSPMGG00000021503	-	87	50.933	Periophthalmus_magnuspinnatus
ENSXCOG00000013140	-	92	39.474	ENSPCIG00000012285	MEPCE	62	42.308	Phascolarctos_cinereus
ENSXCOG00000013140	-	85	40.700	ENSPFOG00000019428	mepce	100	39.851	Poecilia_formosa
ENSXCOG00000013140	-	94	86.034	ENSPFOG00000016062	si:ch1073-157b13.1	100	86.034	Poecilia_formosa
ENSXCOG00000013140	-	88	47.879	ENSPLAG00000014396	mepce	76	47.879	Poecilia_latipinna
ENSXCOG00000013140	-	95	86.506	ENSPLAG00000017448	si:ch1073-157b13.1	98	86.506	Poecilia_latipinna
ENSXCOG00000013140	-	95	84.317	ENSPMEG00000003971	si:ch1073-157b13.1	98	85.424	Poecilia_mexicana
ENSXCOG00000013140	-	87	40.952	ENSPMEG00000013697	mepce	93	41.040	Poecilia_mexicana
ENSXCOG00000013140	-	87	47.879	ENSPREG00000023111	mepce	77	47.879	Poecilia_reticulata
ENSXCOG00000013140	-	76	90.116	ENSPREG00000012073	-	83	85.946	Poecilia_reticulata
ENSXCOG00000013140	-	71	45.181	ENSPPYG00000017411	MEPCE	66	48.325	Pongo_abelii
ENSXCOG00000013140	-	85	40.077	ENSPVAG00000011996	MEPCE	69	49.048	Pteropus_vampyrus
ENSXCOG00000013140	-	94	59.633	ENSPNYG00000001274	-	94	60.146	Pundamilia_nyererei
ENSXCOG00000013140	-	65	62.602	ENSPNYG00000015597	mepce	51	63.780	Pundamilia_nyererei
ENSXCOG00000013140	-	90	53.086	ENSPNAG00000013102	si:ch1073-157b13.1	80	53.086	Pygocentrus_nattereri
ENSXCOG00000013140	-	74	50.000	ENSPNAG00000015662	mepce	54	50.785	Pygocentrus_nattereri
ENSXCOG00000013140	-	78	47.418	ENSRNOG00000001387	LOC100910540	63	50.610	Rattus_norvegicus
ENSXCOG00000013140	-	78	47.418	ENSRNOG00000045911	Mepce	63	50.610	Rattus_norvegicus
ENSXCOG00000013140	-	64	36.802	ENSRBIG00000032270	-	61	47.847	Rhinopithecus_bieti
ENSXCOG00000013140	-	84	37.524	ENSRBIG00000027050	MEPCE	67	47.907	Rhinopithecus_bieti
ENSXCOG00000013140	-	84	38.580	ENSRROG00000031225	MEPCE	68	47.032	Rhinopithecus_roxellana
ENSXCOG00000013140	-	71	45.181	ENSSBOG00000011382	MEPCE	98	40.465	Saimiri_boliviensis_boliviensis
ENSXCOG00000013140	-	88	49.123	ENSSFOG00015018048	mepce	56	50.224	Scleropages_formosus
ENSXCOG00000013140	-	95	56.169	ENSSMAG00000004830	-	97	57.143	Scophthalmus_maximus
ENSXCOG00000013140	-	64	60.976	ENSSMAG00000013182	mepce	50	61.905	Scophthalmus_maximus
ENSXCOG00000013140	-	94	53.992	ENSSDUG00000006422	-	88	56.226	Seriola_dumerili
ENSXCOG00000013140	-	86	55.216	ENSSLDG00000019673	-	96	56.436	Seriola_lalandi_dorsalis
ENSXCOG00000013140	-	72	51.705	ENSSPUG00000004856	MEPCE	72	33.803	Sphenodon_punctatus
ENSXCOG00000013140	-	84	48.447	ENSSPAG00000001215	mepce	72	48.447	Stegastes_partitus
ENSXCOG00000013140	-	95	63.837	ENSSPAG00000008313	-	97	63.837	Stegastes_partitus
ENSXCOG00000013140	-	85	37.100	ENSSSCG00000023680	MEPCE	62	48.864	Sus_scrofa
ENSXCOG00000013140	-	63	70.874	ENSTRUG00000023614	mepce	61	65.600	Takifugu_rubripes
ENSXCOG00000013140	-	96	57.355	ENSTRUG00000001890	-	98	57.686	Takifugu_rubripes
ENSXCOG00000013140	-	63	69.903	ENSTNIG00000010046	mepce	69	71.028	Tetraodon_nigroviridis
ENSXCOG00000013140	-	62	47.093	ENSUAMG00000026470	MEPCE	63	45.205	Ursus_americanus
ENSXCOG00000013140	-	78	43.439	ENSUMAG00000010719	MEPCE	67	49.721	Ursus_maritimus
ENSXCOG00000013140	-	94	47.273	ENSXMAG00000027456	mepce	83	47.273	Xiphophorus_maculatus
ENSXCOG00000013140	-	95	87.384	ENSXMAG00000016250	si:ch1073-157b13.1	98	87.384	Xiphophorus_maculatus