EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000013226 (Gene tree)
Gene ID: -
Gene Symbol: rasd4
Alias: im:7145881|zgc:153845
Full Name: rasd family member 4
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 627 bases
Position: chrKQ557220.1:8867714-8868340
Accession: ZDB-GENE-050506-133
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000017541	MMR_HSR1	PF01926.23	4.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000017763	-	627	-	ENSXCOP00000017541	208 (aa)	-	UPI000293A7EF

Gene Model

Click here to download ENSXCOG00000013226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013226's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000013226	rasd4	61	31.111	ENSXCOG00000017191	nkiras2	67	31.111
ENSXCOG00000013226	rasd4	85	34.021	ENSXCOG00000017353	rasl10a	96	34.021
ENSXCOG00000013226	rasd4	71	37.838	ENSXCOG00000007650	rras	83	37.805
ENSXCOG00000013226	rasd4	77	30.120	ENSXCOG00000001357	rab11a	61	30.120
ENSXCOG00000013226	rasd4	71	32.667	ENSXCOG00000019281	rheb	80	32.667
ENSXCOG00000013226	rasd4	78	31.737	ENSXCOG00000019921	rab7a	80	31.737
ENSXCOG00000013226	rasd4	50	33.333	ENSXCOG00000020608	hrasb	84	34.746
ENSXCOG00000013226	rasd4	79	30.636	ENSXCOG00000003137	nkiras1	87	30.636
ENSXCOG00000013226	rasd4	77	30.723	ENSXCOG00000008042	-	73	30.723
ENSXCOG00000013226	rasd4	78	31.928	ENSXCOG00000009094	rab9b	82	31.928
ENSXCOG00000013226	rasd4	77	30.120	ENSXCOG00000009190	-	73	30.120
ENSXCOG00000013226	rasd4	78	30.994	ENSXCOG00000008410	si:dkey-34d22.5	75	30.994
ENSXCOG00000013226	rasd4	66	34.058	ENSXCOG00000011229	rras2	76	34.058
ENSXCOG00000013226	rasd4	78	30.120	ENSXCOG00000020575	RAB9A	75	30.120
ENSXCOG00000013226	rasd4	81	31.214	ENSXCOG00000019054	rab9a	78	31.214
ENSXCOG00000013226	rasd4	50	33.333	ENSXCOG00000020508	kras	84	34.746
ENSXCOG00000013226	rasd4	58	31.452	ENSXCOG00000003192	-	57	31.452

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013226	rasd4	100	61.321	ENSAPOG00000019479	rasd3	100	61.321	Acanthochromis_polyacanthus
ENSXCOG00000013226	rasd4	100	77.885	ENSAPOG00000014798	-	100	77.885	Acanthochromis_polyacanthus
ENSXCOG00000013226	rasd4	100	94.231	ENSAPOG00000013337	rasd4	100	94.231	Acanthochromis_polyacanthus
ENSXCOG00000013226	rasd4	100	94.231	ENSACIG00000008211	rasd4	100	94.231	Amphilophus_citrinellus
ENSXCOG00000013226	rasd4	100	79.327	ENSACIG00000006211	-	100	79.327	Amphilophus_citrinellus
ENSXCOG00000013226	rasd4	100	77.885	ENSAOCG00000013791	-	100	77.885	Amphiprion_ocellaris
ENSXCOG00000013226	rasd4	100	94.712	ENSAOCG00000011925	rasd4	100	94.712	Amphiprion_ocellaris
ENSXCOG00000013226	rasd4	100	77.885	ENSAPEG00000014385	-	100	77.885	Amphiprion_percula
ENSXCOG00000013226	rasd4	100	94.712	ENSAPEG00000001236	rasd4	100	94.712	Amphiprion_percula
ENSXCOG00000013226	rasd4	100	78.365	ENSATEG00000004140	rasd4	100	78.365	Anabas_testudineus
ENSXCOG00000013226	rasd4	100	93.750	ENSATEG00000004192	-	100	93.750	Anabas_testudineus
ENSXCOG00000013226	rasd4	100	93.750	ENSACLG00000005453	-	100	93.750	Astatotilapia_calliptera
ENSXCOG00000013226	rasd4	100	76.442	ENSCSEG00000017910	-	100	76.442	Cynoglossus_semilaevis
ENSXCOG00000013226	rasd4	99	94.634	ENSCSEG00000003581	rasd4	97	94.634	Cynoglossus_semilaevis
ENSXCOG00000013226	rasd4	99	95.169	ENSCVAG00000004658	rasd4	99	95.169	Cyprinodon_variegatus
ENSXCOG00000013226	rasd4	100	75.000	ENSCVAG00000014662	-	100	75.000	Cyprinodon_variegatus
ENSXCOG00000013226	rasd4	87	50.543	FBgn0040370	CG13375	66	50.543	Drosophila_melanogaster
ENSXCOG00000013226	rasd4	85	46.893	ENSEBUG00000013908	rasd3	84	46.893	Eptatretus_burgeri
ENSXCOG00000013226	rasd4	100	85.782	ENSELUG00000008115	-	100	85.782	Esox_lucius
ENSXCOG00000013226	rasd4	99	75.122	ENSFALG00000000852	-	99	75.122	Ficedula_albicollis
ENSXCOG00000013226	rasd4	100	97.115	ENSFHEG00000003385	rasd4	100	97.115	Fundulus_heteroclitus
ENSXCOG00000013226	rasd4	100	73.558	ENSFHEG00000016103	-	100	73.558	Fundulus_heteroclitus
ENSXCOG00000013226	rasd4	100	99.038	ENSGAFG00000010126	rasd4	100	99.038	Gambusia_affinis
ENSXCOG00000013226	rasd4	100	90.385	ENSGACG00000019357	rasd4	100	90.385	Gasterosteus_aculeatus
ENSXCOG00000013226	rasd4	100	79.327	ENSGAGG00000022039	-	100	79.327	Gopherus_agassizii
ENSXCOG00000013226	rasd4	100	94.231	ENSHBUG00000003805	-	100	94.231	Haplochromis_burtoni
ENSXCOG00000013226	rasd4	100	75.962	ENSHCOG00000015161	-	100	75.962	Hippocampus_comes
ENSXCOG00000013226	rasd4	100	85.096	ENSHCOG00000018554	rasd4	100	85.096	Hippocampus_comes
ENSXCOG00000013226	rasd4	100	77.404	ENSIPUG00000021888	-	100	77.404	Ictalurus_punctatus
ENSXCOG00000013226	rasd4	100	97.115	ENSKMAG00000000984	rasd4	100	97.115	Kryptolebias_marmoratus
ENSXCOG00000013226	rasd4	100	73.558	ENSLACG00000003581	rasd3	100	73.558	Latimeria_chalumnae
ENSXCOG00000013226	rasd4	100	78.846	ENSLACG00000001282	-	100	78.846	Latimeria_chalumnae
ENSXCOG00000013226	rasd4	100	79.808	ENSLOCG00000017761	rasd4	100	79.808	Lepisosteus_oculatus
ENSXCOG00000013226	rasd4	100	72.038	ENSLOCG00000018104	rasd3	100	72.038	Lepisosteus_oculatus
ENSXCOG00000013226	rasd4	100	92.788	ENSMAMG00000001194	-	100	92.788	Mastacembelus_armatus
ENSXCOG00000013226	rasd4	100	93.750	ENSMZEG00005023931	-	100	93.750	Maylandia_zebra
ENSXCOG00000013226	rasd4	100	78.365	ENSMMOG00000012444	rasd4	100	78.365	Mola_mola
ENSXCOG00000013226	rasd4	100	78.846	ENSMALG00000019233	rasd4	100	78.846	Monopterus_albus
ENSXCOG00000013226	rasd4	100	92.788	ENSMALG00000022582	-	100	92.788	Monopterus_albus
ENSXCOG00000013226	rasd4	100	79.808	ENSNBRG00000001521	-	100	79.808	Neolamprologus_brichardi
ENSXCOG00000013226	rasd4	100	93.750	ENSONIG00000021230	-	100	93.750	Oreochromis_niloticus
ENSXCOG00000013226	rasd4	100	93.750	ENSORLG00020019402	rasd4	100	93.750	Oryzias_latipes_hni
ENSXCOG00000013226	rasd4	100	93.750	ENSORLG00015019530	rasd4	100	93.750	Oryzias_latipes_hsok
ENSXCOG00000013226	rasd4	100	93.750	ENSOMEG00000010545	rasd4	100	93.750	Oryzias_melastigma
ENSXCOG00000013226	rasd4	100	72.596	ENSOMEG00000019524	-	100	72.596	Oryzias_melastigma
ENSXCOG00000013226	rasd4	100	63.033	ENSPKIG00000018772	-	100	63.033	Paramormyrops_kingsleyae
ENSXCOG00000013226	rasd4	100	82.692	ENSPKIG00000007853	rasd4	100	82.692	Paramormyrops_kingsleyae
ENSXCOG00000013226	rasd4	100	66.825	ENSPKIG00000013103	rasd3	100	66.825	Paramormyrops_kingsleyae
ENSXCOG00000013226	rasd4	100	76.442	ENSPSIG00000001290	-	100	76.442	Pelodiscus_sinensis
ENSXCOG00000013226	rasd4	100	78.846	ENSPMGG00000012580	-	100	78.846	Periophthalmus_magnuspinnatus
ENSXCOG00000013226	rasd4	100	87.981	ENSPMGG00000000859	rasd4	100	87.981	Periophthalmus_magnuspinnatus
ENSXCOG00000013226	rasd4	100	99.519	ENSPLAG00000003951	rasd4	98	99.519	Poecilia_latipinna
ENSXCOG00000013226	rasd4	100	73.077	ENSPLAG00000006115	-	100	73.077	Poecilia_latipinna
ENSXCOG00000013226	rasd4	100	100.000	ENSPMEG00000021391	rasd4	98	100.000	Poecilia_mexicana
ENSXCOG00000013226	rasd4	100	73.558	ENSPMEG00000003690	-	100	73.558	Poecilia_mexicana
ENSXCOG00000013226	rasd4	100	100.000	ENSPREG00000017010	rasd4	100	100.000	Poecilia_reticulata
ENSXCOG00000013226	rasd4	100	73.558	ENSPREG00000015955	-	100	73.558	Poecilia_reticulata
ENSXCOG00000013226	rasd4	100	93.750	ENSPNYG00000016378	-	100	93.750	Pundamilia_nyererei
ENSXCOG00000013226	rasd4	100	84.615	ENSPNAG00000005318	-	100	84.615	Pygocentrus_nattereri
ENSXCOG00000013226	rasd4	99	65.403	ENSSFOG00015008777	rasd3	99	65.403	Scleropages_formosus
ENSXCOG00000013226	rasd4	100	86.058	ENSSFOG00015004613	rasd4	100	86.058	Scleropages_formosus
ENSXCOG00000013226	rasd4	100	77.885	ENSSMAG00000009101	-	100	77.885	Scophthalmus_maximus
ENSXCOG00000013226	rasd4	100	92.308	ENSSMAG00000016456	rasd4	100	92.308	Scophthalmus_maximus
ENSXCOG00000013226	rasd4	100	94.712	ENSSDUG00000020340	-	100	94.712	Seriola_dumerili
ENSXCOG00000013226	rasd4	100	79.808	ENSSDUG00000015982	rasd4	100	79.808	Seriola_dumerili
ENSXCOG00000013226	rasd4	100	79.808	ENSSLDG00000017618	rasd4	100	79.808	Seriola_lalandi_dorsalis
ENSXCOG00000013226	rasd4	100	94.231	ENSSLDG00000002757	-	98	94.231	Seriola_lalandi_dorsalis
ENSXCOG00000013226	rasd4	100	61.321	ENSSLDG00000016267	rasd3	98	61.321	Seriola_lalandi_dorsalis
ENSXCOG00000013226	rasd4	100	94.231	ENSSPAG00000021839	rasd4	100	94.231	Stegastes_partitus
ENSXCOG00000013226	rasd4	100	78.846	ENSSPAG00000011401	-	100	78.846	Stegastes_partitus
ENSXCOG00000013226	rasd4	99	76.585	ENSTGUG00000007747	-	99	76.585	Taeniopygia_guttata
ENSXCOG00000013226	rasd4	100	89.904	ENSTRUG00000022489	rasd4	100	89.904	Takifugu_rubripes
ENSXCOG00000013226	rasd4	95	85.782	ENSXMAG00000021609	rasd4	99	85.782	Xiphophorus_maculatus