EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000013252 (Gene tree)
Gene ID: -
Gene Symbol: tnrc6c2
Alias: si:dkey-10p5.9
Full Name: trinucleotide repeat containing 6C2
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 14777 bases
Position: chrKQ557220.1:9556930-9571706
Accession: ZDB-GENE-061207-48
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000017577	RRM_1	PF00076.22	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000017800	-	4773	-	ENSXCOP00000017577	1590 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013252's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013252	tnrc6c2	100	76.665	ENSATEG00000003656	tnrc6c2	100	76.481	Anabas_testudineus
ENSXCOG00000013252	tnrc6c2	100	56.246	ENSAMXG00000009579	tnrc6c2	56	65.787	Astyanax_mexicanus
ENSXCOG00000013252	tnrc6c2	100	57.313	ENSDARG00000103851	tnrc6c2	100	55.720	Danio_rerio
ENSXCOG00000013252	tnrc6c2	100	63.317	ENSELUG00000007206	tnrc6c2	99	62.796	Esox_lucius
ENSXCOG00000013252	tnrc6c2	92	69.496	ENSELUG00000008149	-	94	52.992	Esox_lucius
ENSXCOG00000013252	tnrc6c2	100	85.345	ENSFHEG00000003901	tnrc6c2	100	85.526	Fundulus_heteroclitus
ENSXCOG00000013252	tnrc6c2	100	71.782	ENSGACG00000019401	tnrc6c2	90	71.057	Gasterosteus_aculeatus
ENSXCOG00000013252	tnrc6c2	100	52.335	ENSIPUG00000022767	tnrc6c2	99	50.713	Ictalurus_punctatus
ENSXCOG00000013252	tnrc6c2	100	77.791	ENSMAMG00000001718	tnrc6c2	100	78.121	Mastacembelus_armatus
ENSXCOG00000013252	tnrc6c2	100	77.286	ENSMALG00000020932	tnrc6c2	55	85.384	Monopterus_albus
ENSXCOG00000013252	tnrc6c2	100	77.730	ENSNBRG00000000452	tnrc6c2	100	76.994	Neolamprologus_brichardi
ENSXCOG00000013252	tnrc6c2	98	80.497	ENSONIG00000018123	tnrc6c2	100	79.577	Oreochromis_niloticus
ENSXCOG00000013252	tnrc6c2	100	78.819	ENSORLG00000003327	tnrc6c2	87	77.566	Oryzias_latipes
ENSXCOG00000013252	tnrc6c2	100	78.401	ENSORLG00020010730	tnrc6c2	87	77.566	Oryzias_latipes_hni
ENSXCOG00000013252	tnrc6c2	100	78.222	ENSORLG00015009232	tnrc6c2	87	77.804	Oryzias_latipes_hsok
ENSXCOG00000013252	tnrc6c2	100	79.296	ENSOMEG00000017952	tnrc6c2	87	78.461	Oryzias_melastigma
ENSXCOG00000013252	tnrc6c2	99	84.568	ENSPFOG00000011590	tnrc6c2	90	84.321	Poecilia_formosa
ENSXCOG00000013252	tnrc6c2	100	93.496	ENSPLAG00000006992	tnrc6c2	100	93.058	Poecilia_latipinna
ENSXCOG00000013252	tnrc6c2	100	92.183	ENSPMEG00000012946	tnrc6c2	100	92.183	Poecilia_mexicana
ENSXCOG00000013252	tnrc6c2	100	91.448	ENSPREG00000015823	tnrc6c2	100	90.762	Poecilia_reticulata
ENSXCOG00000013252	tnrc6c2	100	78.584	ENSPNYG00000002582	tnrc6c2	55	86.320	Pundamilia_nyererei
ENSXCOG00000013252	tnrc6c2	100	54.637	ENSPNAG00000026838	tnrc6c2	99	55.774	Pygocentrus_nattereri
ENSXCOG00000013252	tnrc6c2	100	76.081	ENSSMAG00000015145	tnrc6c2	55	83.280	Scophthalmus_maximus
ENSXCOG00000013252	tnrc6c2	100	79.536	ENSSDUG00000020741	tnrc6c2	55	86.214	Seriola_dumerili
ENSXCOG00000013252	tnrc6c2	100	79.358	ENSSLDG00000002077	tnrc6c2	55	86.002	Seriola_lalandi_dorsalis
ENSXCOG00000013252	tnrc6c2	100	68.926	ENSTNIG00000004178	tnrc6c2	95	68.127	Tetraodon_nigroviridis
ENSXCOG00000013252	tnrc6c2	100	93.676	ENSXMAG00000006739	tnrc6c2	100	93.676	Xiphophorus_maculatus