EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000013308 (Gene tree)
Gene ID: -
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 1692 bases
Position: chrKQ557215.1:20196996-20198687
Accession: ZDB-GENE-050419-73
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000017648	zf-C2H2	PF00096.26	1.7e-12	1	3
ENSXCOP00000017648	zf-C2H2	PF00096.26	1.7e-12	2	3
ENSXCOP00000017648	zf-C2H2	PF00096.26	1.7e-12	3	3
ENSXCOP00000017648	zf-met	PF12874.7	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000017871	-	1587	-	ENSXCOP00000017648	528 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013308's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000013308	zbtb18	66	35.652	ENSXCOG00000003371	zbtb24	63	35.652
ENSXCOG00000013308	zbtb18	50	41.026	ENSXCOG00000007945	-	96	41.026
ENSXCOG00000013308	zbtb18	59	41.111	ENSXCOG00000001753	bcl6b	60	41.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013308	zbtb18	100	87.873	ENSAPOG00000005168	zbtb18	98	86.995	Acanthochromis_polyacanthus
ENSXCOG00000013308	zbtb18	100	88.512	ENSACIG00000008655	zbtb18	98	88.512	Amphilophus_citrinellus
ENSXCOG00000013308	zbtb18	100	88.049	ENSAOCG00000014105	zbtb18	98	87.170	Amphiprion_ocellaris
ENSXCOG00000013308	zbtb18	100	86.713	ENSAPEG00000003817	zbtb18	77	86.713	Amphiprion_percula
ENSXCOG00000013308	zbtb18	100	87.456	ENSATEG00000010192	zbtb18	98	86.572	Anabas_testudineus
ENSXCOG00000013308	zbtb18	100	87.633	ENSACLG00000022978	zbtb18	97	86.749	Astatotilapia_calliptera
ENSXCOG00000013308	zbtb18	100	72.563	ENSAMXG00000042119	zbtb18	98	72.563	Astyanax_mexicanus
ENSXCOG00000013308	zbtb18	100	85.336	ENSCSEG00000003083	zbtb18	98	84.452	Cynoglossus_semilaevis
ENSXCOG00000013308	zbtb18	100	88.339	ENSCVAG00000016785	zbtb18	98	89.223	Cyprinodon_variegatus
ENSXCOG00000013308	zbtb18	100	71.763	ENSDARG00000028228	zbtb18	100	72.482	Danio_rerio
ENSXCOG00000013308	zbtb18	100	73.393	ENSELUG00000013471	zbtb18	98	73.393	Esox_lucius
ENSXCOG00000013308	zbtb18	100	88.713	ENSFHEG00000020005	zbtb18	98	89.594	Fundulus_heteroclitus
ENSXCOG00000013308	zbtb18	60	94.444	ENSGMOG00000018718	zbtb18	58	91.192	Gadus_morhua
ENSXCOG00000013308	zbtb18	100	92.540	ENSGAFG00000000619	zbtb18	98	92.540	Gambusia_affinis
ENSXCOG00000013308	zbtb18	100	87.523	ENSGACG00000010518	zbtb18	96	87.523	Gasterosteus_aculeatus
ENSXCOG00000013308	zbtb18	100	87.633	ENSHBUG00000013654	zbtb18	98	86.749	Haplochromis_burtoni
ENSXCOG00000013308	zbtb18	66	82.723	ENSHCOG00000002345	zbtb18	94	82.723	Hippocampus_comes
ENSXCOG00000013308	zbtb18	100	67.772	ENSIPUG00000008912	zbtb18	98	69.061	Ictalurus_punctatus
ENSXCOG00000013308	zbtb18	100	87.633	ENSKMAG00000002780	zbtb18	98	88.516	Kryptolebias_marmoratus
ENSXCOG00000013308	zbtb18	100	85.866	ENSLBEG00000014796	zbtb18	98	85.159	Labrus_bergylta
ENSXCOG00000013308	zbtb18	84	58.628	ENSMFAG00000033326	ZBTB18	98	58.723	Macaca_fascicularis
ENSXCOG00000013308	zbtb18	84	58.836	ENSMMUG00000015664	ZBTB18	100	58.936	Macaca_mulatta
ENSXCOG00000013308	zbtb18	100	87.633	ENSMAMG00000021720	zbtb18	98	87.633	Mastacembelus_armatus
ENSXCOG00000013308	zbtb18	100	87.633	ENSMZEG00005027394	zbtb18	98	86.749	Maylandia_zebra
ENSXCOG00000013308	zbtb18	95	52.107	ENSMGAG00000015389	-	100	51.946	Meleagris_gallopavo
ENSXCOG00000013308	zbtb18	100	89.266	ENSMMOG00000007888	zbtb18	99	89.266	Mola_mola
ENSXCOG00000013308	zbtb18	100	88.256	ENSMALG00000000725	zbtb18	98	87.367	Monopterus_albus
ENSXCOG00000013308	zbtb18	100	87.633	ENSNBRG00000013796	zbtb18	100	86.749	Neolamprologus_brichardi
ENSXCOG00000013308	zbtb18	100	87.809	ENSONIG00000000862	zbtb18	98	86.926	Oreochromis_niloticus
ENSXCOG00000013308	zbtb18	100	85.866	ENSORLG00000027425	zbtb18	97	85.866	Oryzias_latipes
ENSXCOG00000013308	zbtb18	100	86.042	ENSORLG00020011988	zbtb18	97	86.042	Oryzias_latipes_hni
ENSXCOG00000013308	zbtb18	100	86.042	ENSORLG00015017457	zbtb18	97	86.042	Oryzias_latipes_hsok
ENSXCOG00000013308	zbtb18	100	86.572	ENSOMEG00000011249	zbtb18	97	86.572	Oryzias_melastigma
ENSXCOG00000013308	zbtb18	100	56.387	ENSPKIG00000008787	-	100	55.856	Paramormyrops_kingsleyae
ENSXCOG00000013308	zbtb18	100	68.929	ENSPKIG00000021964	zbtb18	95	69.767	Paramormyrops_kingsleyae
ENSXCOG00000013308	zbtb18	100	86.226	ENSPMGG00000008020	zbtb18	100	86.226	Periophthalmus_magnuspinnatus
ENSXCOG00000013308	zbtb18	100	92.007	ENSPFOG00000022080	zbtb18	100	92.007	Poecilia_formosa
ENSXCOG00000013308	zbtb18	100	95.833	ENSPLAG00000020960	zbtb18	100	95.833	Poecilia_latipinna
ENSXCOG00000013308	zbtb18	100	95.833	ENSPLAG00000011299	-	100	95.833	Poecilia_latipinna
ENSXCOG00000013308	zbtb18	100	92.895	ENSPMEG00000007554	zbtb18	100	92.895	Poecilia_mexicana
ENSXCOG00000013308	zbtb18	100	92.895	ENSPREG00000008576	zbtb18	98	92.895	Poecilia_reticulata
ENSXCOG00000013308	zbtb18	100	87.633	ENSPNYG00000001530	zbtb18	98	86.749	Pundamilia_nyererei
ENSXCOG00000013308	zbtb18	88	69.028	ENSPNAG00000014066	zbtb18	89	69.106	Pygocentrus_nattereri
ENSXCOG00000013308	zbtb18	100	86.275	ENSSMAG00000018041	zbtb18	100	86.275	Scophthalmus_maximus
ENSXCOG00000013308	zbtb18	100	88.516	ENSSDUG00000018660	zbtb18	100	87.633	Seriola_dumerili
ENSXCOG00000013308	zbtb18	100	88.516	ENSSLDG00000022573	zbtb18	100	87.633	Seriola_lalandi_dorsalis
ENSXCOG00000013308	zbtb18	75	82.308	ENSSPUG00000010554	-	100	51.052	Sphenodon_punctatus
ENSXCOG00000013308	zbtb18	100	88.339	ENSSPAG00000002691	zbtb18	98	87.456	Stegastes_partitus
ENSXCOG00000013308	zbtb18	100	86.219	ENSTRUG00000020604	zbtb18	100	86.219	Takifugu_rubripes
ENSXCOG00000013308	zbtb18	100	80.686	ENSTNIG00000000430	zbtb18	98	84.296	Tetraodon_nigroviridis
ENSXCOG00000013308	zbtb18	100	92.235	ENSXMAG00000018241	zbtb18	99	92.235	Xiphophorus_maculatus