EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXCOG00000013423 (Gene tree)
Gene ID
-
Gene Symbol
cpsf6
Alias
wu:fa22f12|zgc:85819
Full Name
cleavage and polyadenylation specific factor 6
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
6037 bases
Position
chrKQ557209.1:3490997-3497033
Accession
ZDB-GENE-030131-5277
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000017820RRM_1PF00076.223e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000018044-1653-ENSXCOP00000017820550 (aa)--
Gene Model
Click here to download ENSXCOG00000013423's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013423's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000013423cpsf66674.359ENSG00000149532CPSF710050.000Homo_sapiens
ENSXCOG00000013423cpsf65278.873ENSG00000111605CPSF68879.787Homo_sapiens
ENSXCOG00000013423cpsf65278.947ENSAMEG00000011781CPSF65378.547Ailuropoda_melanoleuca
ENSXCOG00000013423cpsf69493.064ENSAOCG00000017865cpsf69493.064Amphiprion_ocellaris
ENSXCOG00000013423cpsf66038.323ENSAOCG00000012357CPSF76238.788Amphiprion_ocellaris
ENSXCOG00000013423cpsf66038.922ENSAPEG00000015375CPSF76239.394Amphiprion_percula
ENSXCOG00000013423cpsf65278.169ENSACAG00000004381CPSF65377.778Anolis_carolinensis
ENSXCOG00000013423cpsf66283.051ENSANAG00000019240CPSF65077.407Aotus_nancymaae
ENSXCOG00000013423cpsf66446.535ENSANAG00000024635CPSF76946.073Aotus_nancymaae
ENSXCOG00000013423cpsf65278.873ENSBTAG00000007323CPSF65278.472Bos_taurus
ENSXCOG00000013423cpsf66553.061ENSBTAG00000015263CPSF77150.811Bos_taurus
ENSXCOG00000013423cpsf66586.061ENSCJAG00000001798CPSF65278.472Callithrix_jacchus
ENSXCOG00000013423cpsf67359.200ENSCJAG00000019282CPSF78055.414Callithrix_jacchus
ENSXCOG00000013423cpsf67582.166ENSCAFG00000000424CPSF67183.444Canis_familiaris
ENSXCOG00000013423cpsf66553.061ENSCAFG00000016152CPSF77151.351Canis_familiaris
ENSXCOG00000013423cpsf65278.873ENSCAFG00020016950CPSF65278.472Canis_lupus_dingo
ENSXCOG00000013423cpsf66553.061ENSCAFG00020012753CPSF77151.351Canis_lupus_dingo
ENSXCOG00000013423cpsf66553.061ENSCHIG00000014655CPSF77150.811Capra_hircus
ENSXCOG00000013423cpsf65278.873ENSCHIG00000010792CPSF65278.472Capra_hircus
ENSXCOG00000013423cpsf66583.735ENSTSYG00000008591CPSF66284.940Carlito_syrichta
ENSXCOG00000013423cpsf66553.061ENSTSYG00000010138-7151.351Carlito_syrichta
ENSXCOG00000013423cpsf65458.904ENSCAPG00000006384CPSF77051.351Cavia_aperea
ENSXCOG00000013423cpsf65278.873ENSCPOG00000015201CPSF65278.472Cavia_porcellus
ENSXCOG00000013423cpsf65758.904ENSCPOG00000009980CPSF77151.351Cavia_porcellus
ENSXCOG00000013423cpsf66583.735ENSCCAG00000028149CPSF65278.472Cebus_capucinus
ENSXCOG00000013423cpsf66552.551ENSCCAG00000032367CPSF77150.811Cebus_capucinus
ENSXCOG00000013423cpsf65278.873ENSCATG00000039288CPSF65278.472Cercocebus_atys
ENSXCOG00000013423cpsf66852.551ENSCATG00000042801CPSF77350.811Cercocebus_atys
ENSXCOG00000013423cpsf65758.904ENSCLAG00000003174CPSF77150.811Chinchilla_lanigera
ENSXCOG00000013423cpsf66852.551ENSCSAG00000006414CPSF77350.811Chlorocebus_sabaeus
ENSXCOG00000013423cpsf65279.225ENSCPBG00000013322CPSF65278.819Chrysemys_picta_bellii
ENSXCOG00000013423cpsf65278.873ENSCGRG00001018082Cpsf65278.472Cricetulus_griseus_chok1gshd
ENSXCOG00000013423cpsf66553.571ENSCGRG00001020382Cpsf77153.804Cricetulus_griseus_chok1gshd
ENSXCOG00000013423cpsf69542.096ENSCGRG00000017954Cpsf77353.804Cricetulus_griseus_crigri
ENSXCOG00000013423cpsf65075.090ENSCGRG00000016909Cpsf65077.612Cricetulus_griseus_crigri
ENSXCOG00000013423cpsf65039.175ENSCSEG00000001956CPSF75743.972Cynoglossus_semilaevis
ENSXCOG00000013423cpsf69491.908ENSCSEG00000008967cpsf69491.908Cynoglossus_semilaevis
ENSXCOG00000013423cpsf610090.102ENSCVAG00000014857cpsf610090.102Cyprinodon_variegatus
ENSXCOG00000013423cpsf66239.153ENSCVAG00000007392CPSF77643.448Cyprinodon_variegatus
ENSXCOG00000013423cpsf65279.225ENSDNOG00000015292CPSF65278.819Dasypus_novemcinctus
ENSXCOG00000013423cpsf67460.000ENSDNOG00000018517CPSF78056.051Dasypus_novemcinctus
ENSXCOG00000013423cpsf65859.060ENSEASG00005008196CPSF77151.351Equus_asinus_asinus
ENSXCOG00000013423cpsf65278.873ENSEASG00005008066CPSF65278.472Equus_asinus_asinus
ENSXCOG00000013423cpsf65278.873ENSECAG00000015988CPSF65278.472Equus_caballus
ENSXCOG00000013423cpsf66775.641ENSECAG00000018521CPSF78256.051Equus_caballus
ENSXCOG00000013423cpsf67460.000ENSFCAG00000013677CPSF78256.051Felis_catus
ENSXCOG00000013423cpsf65281.690ENSFCAG00000002855CPSF65278.472Felis_catus
ENSXCOG00000013423cpsf66451.295ENSFALG00000011927CPSF77654.545Ficedula_albicollis
ENSXCOG00000013423cpsf65174.823ENSFDAG00000002281CPSF65174.476Fukomys_damarensis
ENSXCOG00000013423cpsf68842.105ENSFDAG00000003919CPSF77151.351Fukomys_damarensis
ENSXCOG00000013423cpsf610092.573ENSFHEG00000019693cpsf610092.573Fundulus_heteroclitus
ENSXCOG00000013423cpsf65395.000ENSGMOG00000012951cpsf65395.000Gadus_morhua
ENSXCOG00000013423cpsf66351.955ENSGALG00000040962CPSF76356.250Gallus_gallus
ENSXCOG00000013423cpsf65279.225ENSGAGG00000010228CPSF65278.819Gopherus_agassizii
ENSXCOG00000013423cpsf65278.873ENSGGOG00000008211CPSF65278.472Gorilla_gorilla
ENSXCOG00000013423cpsf69492.678ENSHBUG00000005998cpsf69492.678Haplochromis_burtoni
ENSXCOG00000013423cpsf66058.904ENSHGLG00000019090-7351.351Heterocephalus_glaber_female
ENSXCOG00000013423cpsf65278.873ENSHGLG00000000792CPSF65278.472Heterocephalus_glaber_female
ENSXCOG00000013423cpsf65174.558ENSHGLG00100013861CPSF65077.612Heterocephalus_glaber_male
ENSXCOG00000013423cpsf66058.904ENSHGLG00100013933-7351.351Heterocephalus_glaber_male
ENSXCOG00000013423cpsf65280.836ENSHCOG00000014555cpsf65279.239Hippocampus_comes
ENSXCOG00000013423cpsf66553.061ENSSTOG00000007708CPSF77151.351Ictidomys_tridecemlineatus
ENSXCOG00000013423cpsf66853.061ENSJJAG00000019390Cpsf77351.351Jaculus_jaculus
ENSXCOG00000013423cpsf65297.544ENSKMAG00000014794cpsf69494.412Kryptolebias_marmoratus
ENSXCOG00000013423cpsf65740.411ENSLBEG00000000947CPSF77538.798Labrus_bergylta
ENSXCOG00000013423cpsf65281.338ENSLACG00000008625CPSF65277.431Latimeria_chalumnae
ENSXCOG00000013423cpsf69333.523ENSLACG00000005542CPSF75845.638Latimeria_chalumnae
ENSXCOG00000013423cpsf66688.442ENSLOCG00000016190cpsf66687.615Lepisosteus_oculatus
ENSXCOG00000013423cpsf66553.571ENSLAFG00000032084CPSF77151.351Loxodonta_africana
ENSXCOG00000013423cpsf67774.706ENSLAFG00000030413CPSF65278.472Loxodonta_africana
ENSXCOG00000013423cpsf66552.551ENSMFAG00000001401CPSF77150.811Macaca_fascicularis
ENSXCOG00000013423cpsf65278.873ENSMFAG00000045318CPSF65278.472Macaca_fascicularis
ENSXCOG00000013423cpsf65278.873ENSMMUG00000002921CPSF65278.472Macaca_mulatta
ENSXCOG00000013423cpsf66852.551ENSMMUG00000015280CPSF77350.811Macaca_mulatta
ENSXCOG00000013423cpsf66852.551ENSMNEG00000029585CPSF77350.811Macaca_nemestrina
ENSXCOG00000013423cpsf65278.873ENSMNEG00000036311CPSF65278.472Macaca_nemestrina
ENSXCOG00000013423cpsf66552.551ENSMLEG00000031269CPSF76950.811Mandrillus_leucophaeus
ENSXCOG00000013423cpsf67966.885ENSMLEG00000003957CPSF65077.612Mandrillus_leucophaeus
ENSXCOG00000013423cpsf65090.476ENSMAMG00000010385cpsf69491.908Mastacembelus_armatus
ENSXCOG00000013423cpsf69492.678ENSMZEG00005007975cpsf69492.678Maylandia_zebra
ENSXCOG00000013423cpsf69541.754ENSMGAG00000004876CPSF76258.235Meleagris_gallopavo
ENSXCOG00000013423cpsf65174.733ENSMGAG00000010552CPSF65077.612Meleagris_gallopavo
ENSXCOG00000013423cpsf66553.061ENSMAUG00000013020Cpsf77151.351Mesocricetus_auratus
ENSXCOG00000013423cpsf65278.873ENSMAUG00000013240Cpsf65278.472Mesocricetus_auratus
ENSXCOG00000013423cpsf65278.873ENSMICG00000007385-5278.472Microcebus_murinus
ENSXCOG00000013423cpsf66553.061ENSMICG00000013788CPSF77151.351Microcebus_murinus
ENSXCOG00000013423cpsf66553.061ENSMOCG00000000072Cpsf77151.351Microtus_ochrogaster
ENSXCOG00000013423cpsf65278.873ENSMOCG00000013982Cpsf65278.472Microtus_ochrogaster
ENSXCOG00000013423cpsf65278.521ENSMODG00000007123CPSF65278.125Monodelphis_domestica
ENSXCOG00000013423cpsf66551.471ENSMODG00000020364CPSF77251.295Monodelphis_domestica
ENSXCOG00000013423cpsf67592.228ENSMALG00000014908cpsf67692.727Monopterus_albus
ENSXCOG00000013423cpsf66553.061MGP_CAROLIEiJ_G0022690Cpsf77151.351Mus_caroli
ENSXCOG00000013423cpsf65278.873MGP_CAROLIEiJ_G0015834Cpsf65278.472Mus_caroli
ENSXCOG00000013423cpsf66553.061ENSMUSG00000034820Cpsf77151.351Mus_musculus
ENSXCOG00000013423cpsf65278.873ENSMUSG00000055531Cpsf65278.472Mus_musculus
ENSXCOG00000013423cpsf66553.061MGP_PahariEiJ_G0014184Cpsf77151.351Mus_pahari
ENSXCOG00000013423cpsf68578.873MGP_PahariEiJ_G0031253Cpsf65678.472Mus_pahari
ENSXCOG00000013423cpsf66553.061MGP_SPRETEiJ_G0023604Cpsf77151.351Mus_spretus
ENSXCOG00000013423cpsf65278.873MGP_SPRETEiJ_G0016657Cpsf65278.472Mus_spretus
ENSXCOG00000013423cpsf65458.389ENSMPUG00000014163CPSF76650.270Mustela_putorius_furo
ENSXCOG00000013423cpsf67373.370ENSMLUG00000023960-7769.417Myotis_lucifugus
ENSXCOG00000013423cpsf65174.733ENSMLUG00000004172-5374.386Myotis_lucifugus
ENSXCOG00000013423cpsf66884.783ENSMLUG00000028728-8679.866Myotis_lucifugus
ENSXCOG00000013423cpsf66853.061ENSMLUG00000013278CPSF77351.351Myotis_lucifugus
ENSXCOG00000013423cpsf66551.531ENSNGAG00000005031Cpsf77151.351Nannospalax_galili
ENSXCOG00000013423cpsf65278.873ENSNGAG00000015901Cpsf65278.472Nannospalax_galili
ENSXCOG00000013423cpsf69492.678ENSNBRG00000004089cpsf69492.678Neolamprologus_brichardi
ENSXCOG00000013423cpsf65278.873ENSNLEG00000003798CPSF65278.472Nomascus_leucogenys
ENSXCOG00000013423cpsf66552.551ENSNLEG00000002529CPSF76550.811Nomascus_leucogenys
ENSXCOG00000013423cpsf66551.759ENSMEUG00000002261CPSF77151.892Notamacropus_eugenii
ENSXCOG00000013423cpsf66550.754ENSODEG00000002610CPSF77151.064Octodon_degus
ENSXCOG00000013423cpsf65278.169ENSODEG00000018399-5277.778Octodon_degus
ENSXCOG00000013423cpsf69491.154ENSONIG00000011702cpsf69490.962Oreochromis_niloticus
ENSXCOG00000013423cpsf69543.169ENSOCUG00000024726CPSF77150.811Oryctolagus_cuniculus
ENSXCOG00000013423cpsf67636.245ENSOMEG00000000539CPSF76439.000Oryzias_melastigma
ENSXCOG00000013423cpsf66553.061ENSOGAG00000027958CPSF76651.351Otolemur_garnettii
ENSXCOG00000013423cpsf69940.212ENSOARG00000012937CPSF76450.811Ovis_aries
ENSXCOG00000013423cpsf66552.551ENSPPAG00000028232CPSF77050.811Pan_paniscus
ENSXCOG00000013423cpsf66553.061ENSPPRG00000008538CPSF77151.351Panthera_pardus
ENSXCOG00000013423cpsf65281.690ENSPPRG00000021620CPSF65278.472Panthera_pardus
ENSXCOG00000013423cpsf66553.061ENSPTIG00000021699CPSF77151.351Panthera_tigris_altaica
ENSXCOG00000013423cpsf65278.873ENSPTRG00000005205CPSF65278.472Pan_troglodytes
ENSXCOG00000013423cpsf66552.551ENSPTRG00000003742CPSF77150.811Pan_troglodytes
ENSXCOG00000013423cpsf67389.256ENSPANG00000011641CPSF66190.909Papio_anubis
ENSXCOG00000013423cpsf66552.551ENSPANG00000006037CPSF76750.811Papio_anubis
ENSXCOG00000013423cpsf65284.211ENSPKIG00000003081-5282.578Paramormyrops_kingsleyae
ENSXCOG00000013423cpsf66146.067ENSPKIG00000018054CPSF75955.963Paramormyrops_kingsleyae
ENSXCOG00000013423cpsf66853.061ENSPEMG00000012648Cpsf77351.351Peromyscus_maniculatus_bairdii
ENSXCOG00000013423cpsf65042.568ENSPMAG00000008077-6849.198Petromyzon_marinus
ENSXCOG00000013423cpsf65278.521ENSPCIG00000019063CPSF65278.125Phascolarctos_cinereus
ENSXCOG00000013423cpsf66551.471ENSPCIG00000002551CPSF77066.387Phascolarctos_cinereus
ENSXCOG00000013423cpsf68999.482ENSPFOG00000006990cpsf699100.000Poecilia_formosa
ENSXCOG00000013423cpsf610099.455ENSPLAG00000005715cpsf610099.455Poecilia_latipinna
ENSXCOG00000013423cpsf610099.455ENSPMEG00000001353cpsf610099.455Poecilia_mexicana
ENSXCOG00000013423cpsf610097.091ENSPREG00000004417cpsf610097.091Poecilia_reticulata
ENSXCOG00000013423cpsf66552.551ENSPPYG00000003188CPSF77150.811Pongo_abelii
ENSXCOG00000013423cpsf65281.690ENSPPYG00000004756CPSF65278.472Pongo_abelii
ENSXCOG00000013423cpsf66583.735ENSPCOG00000024384CPSF65278.472Propithecus_coquereli
ENSXCOG00000013423cpsf66553.061ENSPCOG00000011976CPSF77151.351Propithecus_coquereli
ENSXCOG00000013423cpsf66553.061ENSPVAG00000010675CPSF77151.351Pteropus_vampyrus
ENSXCOG00000013423cpsf65288.772ENSPNAG00000024098CPSF69489.038Pygocentrus_nattereri
ENSXCOG00000013423cpsf65544.805ENSPNAG00000015073CPSF76649.640Pygocentrus_nattereri
ENSXCOG00000013423cpsf65279.225ENSRNOG00000005927Cpsf65278.819Rattus_norvegicus
ENSXCOG00000013423cpsf65278.873ENSRBIG00000042827CPSF65278.472Rhinopithecus_bieti
ENSXCOG00000013423cpsf67356.800ENSRBIG00000031429CPSF78255.414Rhinopithecus_bieti
ENSXCOG00000013423cpsf65278.873ENSRROG00000042758CPSF65278.472Rhinopithecus_roxellana
ENSXCOG00000013423cpsf66552.551ENSRROG00000045009CPSF77150.811Rhinopithecus_roxellana
ENSXCOG00000013423cpsf66552.551ENSSBOG00000018431CPSF77150.811Saimiri_boliviensis_boliviensis
ENSXCOG00000013423cpsf66253.266ENSSHAG00000011964CPSF76851.892Sarcophilus_harrisii
ENSXCOG00000013423cpsf67142.529ENSSFOG00015010288cpsf76745.000Scleropages_formosus
ENSXCOG00000013423cpsf65279.791ENSSFOG00015015803CPSF65175.958Scleropages_formosus
ENSXCOG00000013423cpsf65091.575ENSSDUG00000005024cpsf69492.678Seriola_dumerili
ENSXCOG00000013423cpsf65091.575ENSSLDG00000009042cpsf69492.678Seriola_lalandi_dorsalis
ENSXCOG00000013423cpsf66986.061ENSSARG00000006743CPSF66386.061Sorex_araneus
ENSXCOG00000013423cpsf66554.872ENSSPUG00000019344CPSF77352.717Sphenodon_punctatus
ENSXCOG00000013423cpsf69493.449ENSSPAG00000013906cpsf69493.449Stegastes_partitus
ENSXCOG00000013423cpsf65278.873ENSSSCG00000038031CPSF65278.472Sus_scrofa
ENSXCOG00000013423cpsf67460.000ENSSSCG00000013083CPSF78056.051Sus_scrofa
ENSXCOG00000013423cpsf66349.438ENSTGUG00000006513CPSF77153.714Taeniopygia_guttata
ENSXCOG00000013423cpsf69489.595ENSTNIG00000007576cpsf69489.595Tetraodon_nigroviridis
ENSXCOG00000013423cpsf66152.551ENSTTRG00000011085CPSF77051.351Tursiops_truncatus
ENSXCOG00000013423cpsf66553.061ENSUAMG00000017809CPSF77151.351Ursus_americanus
ENSXCOG00000013423cpsf66853.061ENSUMAG00000011825CPSF77351.351Ursus_maritimus
ENSXCOG00000013423cpsf67460.000ENSVVUG00000004939CPSF78056.051Vulpes_vulpes
ENSXCOG00000013423cpsf610093.686ENSXMAG00000003459cpsf610093.686Xiphophorus_maculatus

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