EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000013444 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2511 bases
Position: chrKQ557209.1:3841068-3843578
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000017840	PARP	PF00644.20	1.1e-29	1	1
ENSXCOP00000017839	PARP	PF00644.20	3.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000018064	-	717	-	ENSXCOP00000017840	238 (aa)	-	-
ENSXCOT00000018063	-	879	-	ENSXCOP00000017839	292 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013444's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013444's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000013444	-	76	31.892	ENSXCOG00000012535	-	71	31.122
ENSXCOG00000013444	-	98	37.942	ENSXCOG00000013445	PARP11	99	37.942

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013444	-	99	42.453	ENSG00000111224	PARP11	97	43.028	Homo_sapiens
ENSXCOG00000013444	-	99	53.035	ENSAPOG00000014052	-	99	53.035	Acanthochromis_polyacanthus
ENSXCOG00000013444	-	97	40.836	ENSAPOG00000014072	PARP11	96	40.694	Acanthochromis_polyacanthus
ENSXCOG00000013444	-	98	41.667	ENSAMEG00000015735	PARP11	92	41.667	Ailuropoda_melanoleuca
ENSXCOG00000013444	-	99	50.598	ENSACIG00000004172	parp11	99	70.968	Amphilophus_citrinellus
ENSXCOG00000013444	-	98	36.893	ENSACIG00000004234	PARP11	96	36.624	Amphilophus_citrinellus
ENSXCOG00000013444	-	97	40.514	ENSAOCG00000023104	PARP11	91	40.506	Amphiprion_ocellaris
ENSXCOG00000013444	-	75	59.686	ENSAOCG00000023122	parp11	97	53.556	Amphiprion_ocellaris
ENSXCOG00000013444	-	97	40.514	ENSAPEG00000006255	PARP11	96	40.379	Amphiprion_percula
ENSXCOG00000013444	-	78	58.333	ENSAPEG00000006278	-	83	58.333	Amphiprion_percula
ENSXCOG00000013444	-	78	57.921	ENSATEG00000017912	-	71	60.000	Anabas_testudineus
ENSXCOG00000013444	-	98	40.705	ENSATEG00000017899	PARP11	96	40.379	Anabas_testudineus
ENSXCOG00000013444	-	99	40.764	ENSACAG00000009439	PARP11	95	40.764	Anolis_carolinensis
ENSXCOG00000013444	-	99	42.587	ENSANAG00000026970	PARP11	97	43.200	Aotus_nancymaae
ENSXCOG00000013444	-	98	41.026	ENSACLG00000023902	PARP11	91	40.694	Astatotilapia_calliptera
ENSXCOG00000013444	-	99	52.614	ENSACLG00000023809	PARP11	95	67.857	Astatotilapia_calliptera
ENSXCOG00000013444	-	77	56.846	ENSACLG00000023893	-	98	56.846	Astatotilapia_calliptera
ENSXCOG00000013444	-	98	44.231	ENSAMXG00000039975	PARP11	91	44.127	Astyanax_mexicanus
ENSXCOG00000013444	-	99	49.164	ENSAMXG00000005564	parp11	88	49.164	Astyanax_mexicanus
ENSXCOG00000013444	-	99	41.824	ENSBTAG00000000275	PARP11	80	41.824	Bos_taurus
ENSXCOG00000013444	-	99	42.453	ENSCJAG00000001570	PARP11	97	43.028	Callithrix_jacchus
ENSXCOG00000013444	-	99	41.772	ENSCAFG00000015400	PARP11	93	41.772	Canis_familiaris
ENSXCOG00000013444	-	99	41.772	ENSCAFG00020014851	PARP11	93	41.772	Canis_lupus_dingo
ENSXCOG00000013444	-	99	41.509	ENSCHIG00000020515	PARP11	96	41.509	Capra_hircus
ENSXCOG00000013444	-	99	41.956	ENSTSYG00000004278	PARP11	97	42.800	Carlito_syrichta
ENSXCOG00000013444	-	99	31.786	ENSCAPG00000014814	PARP11	90	38.869	Cavia_aperea
ENSXCOG00000013444	-	98	42.038	ENSCPOG00000009784	PARP11	95	42.038	Cavia_porcellus
ENSXCOG00000013444	-	99	42.453	ENSCCAG00000033980	PARP11	97	43.028	Cebus_capucinus
ENSXCOG00000013444	-	99	42.453	ENSCATG00000043767	PARP11	97	43.028	Cercocebus_atys
ENSXCOG00000013444	-	98	42.357	ENSCLAG00000012852	PARP11	95	42.357	Chinchilla_lanigera
ENSXCOG00000013444	-	99	42.453	ENSCSAG00000011139	PARP11	94	42.453	Chlorocebus_sabaeus
ENSXCOG00000013444	-	99	41.956	ENSCHOG00000010998	PARP11	96	41.956	Choloepus_hoffmanni
ENSXCOG00000013444	-	99	42.038	ENSCPBG00000009723	PARP11	95	42.038	Chrysemys_picta_bellii
ENSXCOG00000013444	-	99	42.767	ENSCANG00000021039	PARP11	97	43.426	Colobus_angolensis_palliatus
ENSXCOG00000013444	-	98	41.720	ENSCGRG00001022479	Parp11	95	41.720	Cricetulus_griseus_chok1gshd
ENSXCOG00000013444	-	98	41.720	ENSCGRG00000015516	Parp11	95	41.720	Cricetulus_griseus_crigri
ENSXCOG00000013444	-	98	41.401	ENSCSEG00000008276	PARP11	91	41.401	Cynoglossus_semilaevis
ENSXCOG00000013444	-	100	64.068	ENSCVAG00000009699	parp11	93	64.068	Cyprinodon_variegatus
ENSXCOG00000013444	-	99	40.823	ENSCVAG00000009553	PARP11	96	40.823	Cyprinodon_variegatus
ENSXCOG00000013444	-	99	44.518	ENSDARG00000098716	parp11	96	44.518	Danio_rerio
ENSXCOG00000013444	-	99	38.871	ENSDNOG00000012102	PARP11	96	38.871	Dasypus_novemcinctus
ENSXCOG00000013444	-	99	41.121	ENSDORG00000011165	Parp11	95	41.456	Dipodomys_ordii
ENSXCOG00000013444	-	99	42.138	ENSEASG00005017087	PARP11	96	42.138	Equus_asinus_asinus
ENSXCOG00000013444	-	99	42.138	ENSECAG00000006287	PARP11	96	42.138	Equus_caballus
ENSXCOG00000013444	-	98	34.906	ENSEEUG00000006650	PARP11	94	34.906	Erinaceus_europaeus
ENSXCOG00000013444	-	98	42.357	ENSELUG00000024555	PARP11	95	42.357	Esox_lucius
ENSXCOG00000013444	-	99	38.768	ENSELUG00000001775	PAR11	94	42.599	Esox_lucius
ENSXCOG00000013444	-	99	41.640	ENSFCAG00000025433	PARP11	99	42.188	Felis_catus
ENSXCOG00000013444	-	99	41.456	ENSFALG00000004789	PARP11	95	41.456	Ficedula_albicollis
ENSXCOG00000013444	-	98	42.038	ENSFDAG00000015269	PARP11	95	42.038	Fukomys_damarensis
ENSXCOG00000013444	-	100	62.185	ENSFHEG00000021365	parp11	96	54.088	Fundulus_heteroclitus
ENSXCOG00000013444	-	99	40.823	ENSFHEG00000021346	PARP11	96	40.823	Fundulus_heteroclitus
ENSXCOG00000013444	-	99	39.873	ENSGMOG00000011168	PARP11	96	39.873	Gadus_morhua
ENSXCOG00000013444	-	98	41.214	ENSGALG00000014347	-	91	41.214	Gallus_gallus
ENSXCOG00000013444	-	99	40.823	ENSGAFG00000008847	PARP11	96	40.823	Gambusia_affinis
ENSXCOG00000013444	-	100	85.959	ENSGAFG00000008840	PARP11	99	85.959	Gambusia_affinis
ENSXCOG00000013444	-	100	44.483	ENSGAFG00000008834	parp11	98	51.827	Gambusia_affinis
ENSXCOG00000013444	-	98	41.214	ENSGACG00000019755	PARP11	98	40.996	Gasterosteus_aculeatus
ENSXCOG00000013444	-	99	42.038	ENSGAGG00000002253	PARP11	93	42.038	Gopherus_agassizii
ENSXCOG00000013444	-	99	42.453	ENSGGOG00000012383	PARP11	97	43.028	Gorilla_gorilla
ENSXCOG00000013444	-	98	41.026	ENSHBUG00000018582	PARP11	91	40.694	Haplochromis_burtoni
ENSXCOG00000013444	-	99	49.206	ENSHBUG00000018628	parp11	99	49.434	Haplochromis_burtoni
ENSXCOG00000013444	-	98	56.711	ENSHBUG00000001054	-	97	56.711	Haplochromis_burtoni
ENSXCOG00000013444	-	98	42.038	ENSHGLG00000003882	PARP11	95	42.038	Heterocephalus_glaber_female
ENSXCOG00000013444	-	98	42.038	ENSHGLG00100015716	PARP11	95	42.038	Heterocephalus_glaber_male
ENSXCOG00000013444	-	99	38.535	ENSHCOG00000004856	PARP11	96	38.535	Hippocampus_comes
ENSXCOG00000013444	-	99	43.750	ENSIPUG00000009053	PARP11	96	43.667	Ictalurus_punctatus
ENSXCOG00000013444	-	77	42.972	ENSSTOG00000024474	PARP11	100	42.972	Ictidomys_tridecemlineatus
ENSXCOG00000013444	-	96	40.196	ENSJJAG00000013220	Parp11	96	40.752	Jaculus_jaculus
ENSXCOG00000013444	-	98	40.705	ENSKMAG00000016250	PARP11	92	40.506	Kryptolebias_marmoratus
ENSXCOG00000013444	-	98	60.333	ENSLBEG00000018546	-	96	60.333	Labrus_bergylta
ENSXCOG00000013444	-	98	39.936	ENSLBEG00000018527	PARP11	92	39.873	Labrus_bergylta
ENSXCOG00000013444	-	98	58.000	ENSLBEG00000018566	parp11	100	58.000	Labrus_bergylta
ENSXCOG00000013444	-	99	42.138	ENSLACG00000016902	PARP11	94	42.138	Latimeria_chalumnae
ENSXCOG00000013444	-	99	41.824	ENSLAFG00000017489	PARP11	96	41.824	Loxodonta_africana
ENSXCOG00000013444	-	99	42.453	ENSMFAG00000002647	PARP11	97	43.028	Macaca_fascicularis
ENSXCOG00000013444	-	99	42.453	ENSMMUG00000018273	PARP11	97	43.028	Macaca_mulatta
ENSXCOG00000013444	-	99	42.453	ENSMNEG00000044577	PARP11	97	43.028	Macaca_nemestrina
ENSXCOG00000013444	-	99	42.453	ENSMLEG00000042753	PARP11	97	43.028	Mandrillus_leucophaeus
ENSXCOG00000013444	-	98	59.516	ENSMAMG00000011326	parp11	97	59.516	Mastacembelus_armatus
ENSXCOG00000013444	-	98	37.143	ENSMAMG00000011317	PARP11	96	36.875	Mastacembelus_armatus
ENSXCOG00000013444	-	99	53.795	ENSMZEG00005006055	PARP11	99	53.795	Maylandia_zebra
ENSXCOG00000013444	-	98	41.026	ENSMZEG00005006306	PARP11	91	40.694	Maylandia_zebra
ENSXCOG00000013444	-	99	50.763	ENSMZEG00005006075	-	99	51.210	Maylandia_zebra
ENSXCOG00000013444	-	56	39.355	ENSMGAG00000013905	-	99	39.355	Meleagris_gallopavo
ENSXCOG00000013444	-	99	41.509	ENSMAUG00000019478	Parp11	96	41.509	Mesocricetus_auratus
ENSXCOG00000013444	-	99	42.453	ENSMICG00000035881	PARP11	97	43.426	Microcebus_murinus
ENSXCOG00000013444	-	98	41.720	ENSMOCG00000019262	Parp11	95	41.720	Microtus_ochrogaster
ENSXCOG00000013444	-	98	36.624	ENSMMOG00000001940	PARP11	96	36.478	Mola_mola
ENSXCOG00000013444	-	100	42.320	ENSMODG00000018324	PARP11	94	42.320	Monodelphis_domestica
ENSXCOG00000013444	-	98	41.026	ENSMALG00000013170	PARP11	93	38.966	Monopterus_albus
ENSXCOG00000013444	-	79	51.832	ENSMALG00000013858	-	76	52.778	Monopterus_albus
ENSXCOG00000013444	-	98	42.038	MGP_CAROLIEiJ_G0028897	Parp11	95	42.038	Mus_caroli
ENSXCOG00000013444	-	98	42.038	ENSMUSG00000037997	Parp11	100	42.570	Mus_musculus
ENSXCOG00000013444	-	98	42.038	MGP_PahariEiJ_G0022658	Parp11	95	42.038	Mus_pahari
ENSXCOG00000013444	-	98	42.038	MGP_SPRETEiJ_G0029941	Parp11	95	42.038	Mus_spretus
ENSXCOG00000013444	-	99	41.640	ENSMPUG00000009332	PARP11	93	41.640	Mustela_putorius_furo
ENSXCOG00000013444	-	99	39.296	ENSMLUG00000012557	PARP11	96	39.296	Myotis_lucifugus
ENSXCOG00000013444	-	99	41.195	ENSNGAG00000022923	Parp11	96	41.195	Nannospalax_galili
ENSXCOG00000013444	-	98	36.570	ENSNBRG00000005665	PARP11	96	35.873	Neolamprologus_brichardi
ENSXCOG00000013444	-	99	49.407	ENSNBRG00000005708	parp11	95	48.675	Neolamprologus_brichardi
ENSXCOG00000013444	-	99	42.271	ENSNLEG00000029438	PARP11	97	43.200	Nomascus_leucogenys
ENSXCOG00000013444	-	100	37.304	ENSMEUG00000005684	PARP11	95	37.304	Notamacropus_eugenii
ENSXCOG00000013444	-	99	42.138	ENSOPRG00000006106	PARP11	96	42.138	Ochotona_princeps
ENSXCOG00000013444	-	98	42.038	ENSODEG00000002808	PARP11	95	42.038	Octodon_degus
ENSXCOG00000013444	-	99	54.575	ENSONIG00000011552	-	88	54.575	Oreochromis_niloticus
ENSXCOG00000013444	-	98	41.026	ENSONIG00000011553	PARP11	91	40.694	Oreochromis_niloticus
ENSXCOG00000013444	-	99	42.138	ENSOCUG00000016536	PARP11	94	42.138	Oryctolagus_cuniculus
ENSXCOG00000013444	-	98	41.346	ENSORLG00000014813	PARP11	91	41.139	Oryzias_latipes
ENSXCOG00000013444	-	98	41.346	ENSORLG00020014836	PARP11	91	41.139	Oryzias_latipes_hni
ENSXCOG00000013444	-	98	41.346	ENSORLG00015013142	PARP11	91	41.139	Oryzias_latipes_hsok
ENSXCOG00000013444	-	99	56.478	ENSOMEG00000007331	-	96	56.478	Oryzias_melastigma
ENSXCOG00000013444	-	97	41.158	ENSOMEG00000007348	PARP11	91	41.139	Oryzias_melastigma
ENSXCOG00000013444	-	99	42.453	ENSOGAG00000008251	PARP11	94	42.453	Otolemur_garnettii
ENSXCOG00000013444	-	99	41.509	ENSOARG00000010367	PARP11	83	41.509	Ovis_aries
ENSXCOG00000013444	-	99	42.453	ENSPPAG00000038296	PARP11	94	42.453	Pan_paniscus
ENSXCOG00000013444	-	99	41.640	ENSPPRG00000007746	PARP11	99	42.188	Panthera_pardus
ENSXCOG00000013444	-	99	41.640	ENSPTIG00000012833	PARP11	99	42.188	Panthera_tigris_altaica
ENSXCOG00000013444	-	99	42.453	ENSPTRG00000004546	PARP11	97	43.028	Pan_troglodytes
ENSXCOG00000013444	-	99	42.453	ENSPANG00000003839	PARP11	97	43.028	Papio_anubis
ENSXCOG00000013444	-	99	44.479	ENSPKIG00000013035	PARP11	96	44.479	Paramormyrops_kingsleyae
ENSXCOG00000013444	-	99	42.038	ENSPSIG00000009236	PARP11	95	42.038	Pelodiscus_sinensis
ENSXCOG00000013444	-	98	49.338	ENSPMGG00000009814	-	100	49.338	Periophthalmus_magnuspinnatus
ENSXCOG00000013444	-	97	41.026	ENSPMGG00000009812	PARP11	93	41.379	Periophthalmus_magnuspinnatus
ENSXCOG00000013444	-	100	37.975	ENSPCIG00000029072	PARP11	95	37.975	Phascolarctos_cinereus
ENSXCOG00000013444	-	99	40.190	ENSPFOG00000006032	PARP11	96	40.190	Poecilia_formosa
ENSXCOG00000013444	-	100	60.333	ENSPFOG00000006004	parp11	97	60.333	Poecilia_formosa
ENSXCOG00000013444	-	100	84.932	ENSPFOG00000023895	-	99	84.932	Poecilia_formosa
ENSXCOG00000013444	-	100	53.000	ENSPLAG00000003782	parp11	99	53.000	Poecilia_latipinna
ENSXCOG00000013444	-	99	39.274	ENSPLAG00000023082	PARP11	96	39.274	Poecilia_latipinna
ENSXCOG00000013444	-	77	88.587	ENSPMEG00000007070	-	97	85.128	Poecilia_mexicana
ENSXCOG00000013444	-	100	60.738	ENSPMEG00000007084	parp11	99	60.738	Poecilia_mexicana
ENSXCOG00000013444	-	99	40.506	ENSPMEG00000016942	PARP11	96	40.506	Poecilia_mexicana
ENSXCOG00000013444	-	99	38.535	ENSPREG00000002953	PARP11	96	38.535	Poecilia_reticulata
ENSXCOG00000013444	-	100	50.479	ENSPREG00000002724	parp11	99	50.479	Poecilia_reticulata
ENSXCOG00000013444	-	100	77.043	ENSPREG00000002810	-	99	72.222	Poecilia_reticulata
ENSXCOG00000013444	-	99	39.937	ENSPPYG00000004162	PARP11	93	39.937	Pongo_abelii
ENSXCOG00000013444	-	99	41.824	ENSPCAG00000004446	PARP11	96	41.824	Procavia_capensis
ENSXCOG00000013444	-	99	40.190	ENSPCOG00000019691	PARP11	96	40.190	Propithecus_coquereli
ENSXCOG00000013444	-	76	44.186	ENSPVAG00000016183	PARP11	74	44.186	Pteropus_vampyrus
ENSXCOG00000013444	-	98	41.026	ENSPNYG00000000430	PARP11	91	40.694	Pundamilia_nyererei
ENSXCOG00000013444	-	98	52.492	ENSPNYG00000000440	parp11	99	49.798	Pundamilia_nyererei
ENSXCOG00000013444	-	97	46.552	ENSPNAG00000029814	parp11	97	49.141	Pygocentrus_nattereri
ENSXCOG00000013444	-	98	44.551	ENSPNAG00000029821	PARP11	91	44.444	Pygocentrus_nattereri
ENSXCOG00000013444	-	98	42.038	ENSRNOG00000060689	Parp11	90	42.038	Rattus_norvegicus
ENSXCOG00000013444	-	99	42.453	ENSRBIG00000028539	PARP11	97	43.028	Rhinopithecus_bieti
ENSXCOG00000013444	-	99	42.453	ENSRROG00000034664	PARP11	97	43.028	Rhinopithecus_roxellana
ENSXCOG00000013444	-	99	42.453	ENSSBOG00000032202	PARP11	97	43.028	Saimiri_boliviensis_boliviensis
ENSXCOG00000013444	-	100	42.006	ENSSHAG00000012738	PARP11	81	42.006	Sarcophilus_harrisii
ENSXCOG00000013444	-	98	42.628	ENSSFOG00015006711	PARP11	96	42.271	Scleropages_formosus
ENSXCOG00000013444	-	99	35.599	ENSSFOG00015006690	parp11	95	36.246	Scleropages_formosus
ENSXCOG00000013444	-	98	40.446	ENSSMAG00000001220	PARP11	99	40.446	Scophthalmus_maximus
ENSXCOG00000013444	-	92	39.189	ENSSDUG00000003215	PARP11	75	38.870	Seriola_dumerili
ENSXCOG00000013444	-	99	59.283	ENSSDUG00000003200	parp11	97	59.283	Seriola_dumerili
ENSXCOG00000013444	-	98	41.346	ENSSLDG00000023440	PARP11	92	41.009	Seriola_lalandi_dorsalis
ENSXCOG00000013444	-	100	36.759	ENSSLDG00000023449	parp11	100	37.874	Seriola_lalandi_dorsalis
ENSXCOG00000013444	-	99	42.138	ENSSARG00000008526	PARP11	96	42.138	Sorex_araneus
ENSXCOG00000013444	-	98	42.173	ENSSPUG00000017258	PARP11	94	42.444	Sphenodon_punctatus
ENSXCOG00000013444	-	99	56.026	ENSSPAG00000022391	parp11	97	56.026	Stegastes_partitus
ENSXCOG00000013444	-	98	41.026	ENSSPAG00000022404	PARP11	96	40.694	Stegastes_partitus
ENSXCOG00000013444	-	99	42.138	ENSSSCG00000000728	PARP11	96	42.138	Sus_scrofa
ENSXCOG00000013444	-	98	41.534	ENSTGUG00000013169	PARP11	95	41.534	Taeniopygia_guttata
ENSXCOG00000013444	-	98	40.064	ENSTRUG00000015275	PARP11	96	40.063	Takifugu_rubripes
ENSXCOG00000013444	-	98	39.744	ENSTNIG00000011031	PARP11	95	39.873	Tetraodon_nigroviridis
ENSXCOG00000013444	-	99	41.824	ENSTBEG00000009790	PARP11	96	41.824	Tupaia_belangeri
ENSXCOG00000013444	-	99	42.138	ENSTTRG00000008577	PARP11	96	42.138	Tursiops_truncatus
ENSXCOG00000013444	-	99	41.640	ENSUAMG00000006036	PARP11	95	41.640	Ursus_americanus
ENSXCOG00000013444	-	99	41.640	ENSUMAG00000014832	PARP11	95	41.640	Ursus_maritimus
ENSXCOG00000013444	-	70	42.500	ENSVPAG00000008412	PARP11	71	42.500	Vicugna_pacos
ENSXCOG00000013444	-	99	42.089	ENSVVUG00000018083	PARP11	99	41.987	Vulpes_vulpes
ENSXCOG00000013444	-	97	39.677	ENSXETG00000011229	parp11	97	40.256	Xenopus_tropicalis
ENSXCOG00000013444	-	77	50.420	ENSXMAG00000002737	parp11	99	50.420	Xiphophorus_maculatus
ENSXCOG00000013444	-	99	40.506	ENSXMAG00000005477	PARP11	96	40.506	Xiphophorus_maculatus
ENSXCOG00000013444	-	72	92.381	ENSXMAG00000020833	-	92	92.381	Xiphophorus_maculatus